FFCP PHASE1:Hg19::chr17:56408601..56408605,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=406934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31529 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=73bp_to_NR_029683,uc010wnu.1_5end | |||
|description=CAGE_peak_1_at_MIR142_5end | |||
|id=chr17:56408601..56408605,- | |||
|ontology_enrichment_celltype=CL:0000037!3.79e-93!172;CL:0000566!3.79e-93!172;CL:0000988!5.13e-91!182;CL:0002032!3.86e-88!165;CL:0000837!3.86e-88!165;CL:0000738!7.38e-70!140;CL:0002031!3.02e-66!124;CL:0002087!7.56e-66!119;CL:0000763!8.09e-45!112;CL:0000049!8.09e-45!112;CL:0000542!5.56e-39!53;CL:0000051!5.56e-39!53;CL:0000838!5.44e-38!52;CL:0000839!5.10e-26!70;CL:0002009!1.16e-25!65;CL:0000557!2.06e-25!71;CL:0002194!1.97e-24!63;CL:0000576!1.97e-24!63;CL:0000040!1.97e-24!63;CL:0000559!1.97e-24!63;CL:0000766!2.22e-24!76;CL:0000945!3.82e-21!24;CL:0000826!3.82e-21!24;CL:0000134!1.45e-20!358;CL:0002057!1.53e-20!42;CL:0002320!2.38e-19!365;CL:0000860!2.48e-19!45;CL:0000084!4.71e-16!25;CL:0000827!4.71e-16!25;CL:0000219!1.30e-15!390;CL:0000236!3.92e-11!14;CL:0000048!1.03e-10!430;CL:0000034!2.25e-10!444;CL:0000723!4.65e-10!436;CL:0000791!1.30e-09!18;CL:0000789!1.30e-09!18;CL:0002420!1.30e-09!18;CL:0002419!1.30e-09!18;CL:0000790!1.30e-09!18;CL:0000625!1.05e-08!11;CL:0002393!3.17e-07!9;CL:0002397!3.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.54e-24;24!CL:0000542;4.34e-23;53!CL:0000084;2.50e-15;25!CL:0002087;1.72e-13;104!CL:0000988;2.68e-11;177!CL:0000738;1.32e-10;136!CL:0000473;1.36e-10;39!CL:0000234;1.36e-10;39!CL:0000860;6.38e-10;33!CL:0002057;6.38e-10;33!CL:0000625;1.04e-09;11!CL:0000236;4.19e-08;13!CL:0000576;5.22e-08;48!CL:0000763;3.88e-07;100!CL:0000791;8.41e-07;18!CL:0000789;8.41e-07;18!CL:0002419;8.41e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,6.04e-65,161;CL:0000837,6.04e-65,161;CL:0000988,4.36e-64,177;CL:0000037,4.50e-63,168;CL:0002031,5.89e-49,120;CL:0002087,9.69e-49,115;CL:0000738,1.26e-45,136;CL:0000542,5.12e-38,53;CL:0000051,5.12e-38,53;CL:0000838,1.32e-36,52;CL:0000763,4.34e-27,108;CL:0000049,4.34e-27,108;CL:0000945,9.56e-24,24;CL:0000826,9.56e-24,24;CL:0000134,1.01e-16,354;CL:0000473,3.73e-16,48;CL:0000234,3.73e-16,48;CL:0002320,6.19e-16,361;CL:0002009,2.95e-15,61;CL:0000084,3.42e-15,25;CL:0000827,3.42e-15,25;CL:0002194,7.71e-15,59;CL:0000576,7.71e-15,59;CL:0000040,7.71e-15,59;CL:0000559,7.71e-15,59;CL:0000839,1.21e-14,66;CL:0000557,2.60e-14,67;CL:0000860,1.61e-13,42;CL:0002057,1.61e-13,42;CL:0000219,3.44e-13,386;CL:0000766,9.20e-12,72;CL:0000048,6.53e-10,427;CL:0000034,8.18e-10,441;CL:0000625,1.49e-09,11;CL:0000723,1.81e-09,433;CL:0000236,3.44e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000051;4.34e-23;53!CL:0002057;2.50e-10;42!CL:0000049;2.44e-08;108!CL:0000790;8.41e-07;18 | |||
|ontology_enrichment_disease=DOID:2531!1.18e-33!51;DOID:0060083!1.18e-33!51;DOID:1240!5.68e-26!39;DOID:8692!1.90e-18!31;DOID:0060058!2.75e-11!10;DOID:1036!7.67e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.09e-23;51!DOID:0060083;3.09e-23;51!DOID:1240;3.16e-19;39!DOID:0060058;4.11e-17;10!DOID:8692;2.57e-14;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.72e-37,51;DOID:0060083,8.72e-37,51;DOID:1240,1.21e-24,39;DOID:0060058,5.42e-17,10;DOID:8692,2.03e-14,31;DOID:0050686,6.96e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.39e-38!102;UBERON:0003061!7.39e-38!102;UBERON:0002193!3.08e-34!112;UBERON:0002371!9.70e-23!80;UBERON:0001474!7.56e-20!86;UBERON:0002384!1.04e-17!375;UBERON:0002405!3.85e-16!115;UBERON:0004765!6.79e-15!101;UBERON:0001434!6.79e-15!101;UBERON:0000178!1.43e-14!15;UBERON:0000179!1.43e-14!15;UBERON:0000463!1.43e-14!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-15;15!UBERON:0000179;1.72e-15;15!UBERON:0000463;1.72e-15;15!UBERON:0002390;1.85e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.40e-25,98;UBERON:0003061,1.40e-25,98;UBERON:0002193,6.60e-22,108;UBERON:0000178,1.49e-15,15;UBERON:0000179,1.49e-15,15;UBERON:0000463,1.49e-15,15;UBERON:0002384,7.24e-15,371;UBERON:0002371,8.58e-13,76;UBERON:0002405,3.02e-12,93;UBERON:0001474,3.07e-11,82;UBERON:0004765,1.63e-09,90;UBERON:0001434,8.80e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42535180810454,4.26923065139718,6.0607301611533,0,0.383829398097213,0.77408061658038,0,0,0,7.74672005803016,9.66750780914466,0.293600439334847,1.10799081706375,0.601633342410425,0.868043482863407,0.671746422719773,3.2389366601898,0.515151135268373,1.16318591023652,0,0,1.62700325833979,0,2.78735733805593,2.8769239232215,1.7931249457037,1.6553756092201,1.72372840368309,1.93645405075148,0,4.51781614902251,0.818718450173537,0.674170453335254,1.53041946185451,0.962787081228281,0.639337125799041,1.64925650093358,1.39624560335142,1.70489900213078,0.870627715885752,0.56738522469114,0,6.02996796616184,2.60741459210101,1.08594422352558,2.42159801053347,0,1.89877432464531,0.845021145247767,0.850417199860174,1.25795187305026,0.22465726229299,0.901061357049038,0.64290234678832,1.99508920618874,2.58591680358817,1.0959849225878,1.75996244461323,1.09227722252426,0.889509253863555,1.28019066769952,1.60158394814405,2.29900975981793,3.30522436392431,0.954053754535364,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,1.31692042387539,0.196709770113833,0.786021525498329,0.411202997999018,4.01247588937627,0,0,0,4.12218690475142,0.589211814949674,1.10766947291811,1.08321545506006,10.631579537231,8.84403563407172,11.8395291314647,16.3046510493651,10.7227141721969,0,0.267540828089713,0,10.197840842781,0,0.34362744548263,0.506039384039006,3.50421955756506,1.30216690771284,1.90090408889675,0.150575119077773,1.15187950038977,1.24930726552346,2.8413270245282,1.64225599384209,1.20964045934839,1.06976078313403,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.0447784237956,0.930705723632056,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,1.8720341211139,0.594524649154913,0,0,0,0,0,0,1.97065295158377,0.44024217006613,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,9.97557781542393,0.985153801009636,1.50939302401662,0.898401253958239,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.3071772551245,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.56702848308952,5.35246044999663,2.84823593587081,5.47933083552915,6.17043409629291,3.24236655596359,5.40031437238115,3.96562588147135,0.106824071127473,0,0,4.08766985276581,1.73123055571734,4.83764534769216,3.34795172730527,1.99579371432817,2.10655907145603,0.423347165447766,1.62310970137278,5.05434920604226,9.35762184036088,2.97691801968744,0,0,1.92705690124439,4.43959355820305,1.27753871307098,5.839590860848,0,0.447352215784832,0.500547425135725,0.976940477010201,1.67043704337145,1.23087398947712,0.540911356951966,2.66457574398256,5.63948020351398,0,0,0,6.12938613526131,0.284136146806413,0,0,0,0,0.140669416410513,0,3.29607748453519,0,0,2.76283915531148,0,0,1.84627208191604,0,0,0,4.09257896181497,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,5.10966490978682,3.1396051279005,0.332423363800313,1.1279783030859,0.392125068635479,1.00692952185506,1.70778359451767,0.476809736941136,0,0,0,0,0,0.176915129006678,0.611030144933625,4.74433805888995,5.56037725259263,4.17687798021822,0.067401132980677,0,0,2.18945747058799,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38693328263138,0,0,0,0,0,1.349843349309,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.992332043623902,4.34745590175477,4.62811873847405,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32864840313363,1.4720885483026,0.327609848846413,0,0,11.1992941678761,6.29481205195431,7.74967408473671,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,4.33739597506893,0,0,0,0,0,0.319267718114302,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07421177600403,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0,0.142953088353313,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0.11294608203896,0.659643100472575,0,0.617393264863557,0,0,0,0,0,0,0,0,1.2217909337381,0.128915775947154,1.09935271517422,0,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.310298987585686,0.213233981900981,0,0.968833647540092,1.24149428591716,0.224263725161227,0,0,0.217716747896961,0,0.606168477131288,0,0,0,0,0,0,0,0,0,0,1.61019034872821,6.09080135376143 | |||
|short_description=p1@MIR142 | |||
}} |
Revision as of 16:30, 20 January 2014
Short description: | p1@MIR142 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MIR142_5end |
Coexpression cluster: | NA |
Association with transcript: | 73bp_to_NR_029683, uc010wnu.1_5end |
EntrezGene: | MIR142 |
HGNC: | 31529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.40e-25 | 98 |
blood island | 1.40e-25 | 98 |
hemolymphoid system | 6.60e-22 | 108 |
blood | 1.49e-15 | 15 |
haemolymphatic fluid | 1.49e-15 | 15 |
organism substance | 1.49e-15 | 15 |
connective tissue | 7.24e-15 | 371 |
bone marrow | 8.58e-13 | 76 |
immune system | 3.02e-12 | 93 |
bone element | 3.07e-11 | 82 |
skeletal element | 1.63e-09 | 90 |
skeletal system | 8.80e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.72e-37 | 51 |
immune system cancer | 8.72e-37 | 51 |
leukemia | 1.21e-24 | 39 |
lymphoma | 5.42e-17 | 10 |
myeloid leukemia | 2.03e-14 | 31 |
organ system cancer | 6.96e-07 | 137 |