FFCP PHASE1:Hg19::chr1:46330042..46330055,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23139 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=19035 | |||
|TSSclassifier=weak | |||
|UniProt=E9PBM6,A0JLR0 | |||
|association_with_transcript=0bp_to_ENST00000456625,ENST00000468212,uc001cox.1,uc001coy.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_MAST2_5end | |||
|id=chr1:46330042..46330055,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.19e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.85e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.31e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.11e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.08e-49!94;UBERON:0001016!6.08e-49!94;UBERON:0001017!1.11e-48!82;UBERON:0005743!4.55e-48!86;UBERON:0001049!1.69e-44!57;UBERON:0005068!1.69e-44!57;UBERON:0006241!1.69e-44!57;UBERON:0007135!1.69e-44!57;UBERON:0002020!1.71e-37!34;UBERON:0003528!1.71e-37!34;UBERON:0002616!2.33e-37!59;UBERON:0001893!3.98e-37!34;UBERON:0000955!1.68e-36!69;UBERON:0006238!1.68e-36!69;UBERON:0002791!3.49e-35!33;UBERON:0002780!5.86e-35!41;UBERON:0001890!5.86e-35!41;UBERON:0006240!5.86e-35!41;UBERON:0003080!5.98e-34!42;UBERON:0001869!1.90e-33!32;UBERON:0002619!9.66e-32!22;UBERON:0002346!3.80e-31!90;UBERON:0003075!4.17e-31!86;UBERON:0007284!4.17e-31!86;UBERON:0007023!4.74e-30!115;UBERON:0001950!1.08e-27!20;UBERON:0000956!1.97e-27!25;UBERON:0000203!1.97e-27!25;UBERON:0000924!2.32e-25!173;UBERON:0006601!2.32e-25!173;UBERON:0004121!5.97e-25!169;UBERON:0003056!8.91e-23!61;UBERON:0000033!7.68e-21!123;UBERON:0000153!1.84e-20!129;UBERON:0007811!1.84e-20!129;UBERON:0002298!3.12e-14!8;UBERON:0001871!1.17e-13!7;UBERON:0000200!2.38e-13!6;UBERON:0000349!4.52e-12!5;UBERON:0002420!2.00e-11!9;UBERON:0007245!2.00e-11!9;UBERON:0010009!2.00e-11!9;UBERON:0010011!2.00e-11!9;UBERON:0000454!2.00e-11!9;UBERON:0003076!2.08e-11!15;UBERON:0003057!2.08e-11!15;UBERON:0002308!2.11e-11!9;UBERON:0000125!2.11e-11!9;UBERON:0004732!1.17e-10!13;UBERON:0004733!7.37e-09!12;UBERON:0002028!7.37e-09!12;UBERON:0007277!7.37e-09!12;UBERON:0000025!1.04e-08!194;UBERON:0000064!2.79e-08!219;UBERON:0006331!3.49e-08!3;UBERON:0001896!5.72e-08!3;UBERON:0005290!5.72e-08!3;UBERON:0010096!5.72e-08!3;UBERON:0000988!7.21e-08!3;UBERON:0009663!1.34e-07!7;UBERON:0002021!2.58e-07!5;UBERON:0002771!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;2.11e-14;1!UBERON:0000941;2.11e-14;1!UBERON:0001785;2.11e-14;1!UBERON:0002464;2.11e-14;1!UBERON:0004904;2.11e-14;1!UBERON:0001021;2.11e-14;1!UBERON:0009661;2.11e-14;1!UBERON:0002950;2.11e-14;1!UBERON:0001891;2.11e-14;1!UBERON:0000922;2.61e-09;49!UBERON:0003528;5.16e-08;34!UBERON:0002020;5.16e-08;34!UBERON:0001016;6.84e-08;83!UBERON:0002148;7.52e-08;2!UBERON:0003714;7.52e-08;2!UBERON:0005162;7.52e-08;2!UBERON:0000122;7.52e-08;2!UBERON:0006331;7.52e-08;2!UBERON:0009662;7.52e-08;2!UBERON:0000125;9.93e-07;9!UBERON:0002308;9.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.84e-14,1;UBERON:0009661,1.84e-14,1;UBERON:0002950,1.84e-14,1;UBERON:0001891,1.84e-14,1;UBERON:0009616,1.84e-14,1;UBERON:0010286,1.84e-14,1;UBERON:0000941,2.11e-14,1;UBERON:0001785,2.11e-14,1;UBERON:0002464,2.11e-14,1;UBERON:0004904,2.11e-14,1;UBERON:0001021,2.11e-14,1;UBERON:0003902,2.11e-14,1;UBERON:0005425,2.11e-14,1;UBERON:0001016,2.34e-13,89;UBERON:0001017,4.46e-12,81;UBERON:0003528,1.61e-09,34;UBERON:0002020,1.61e-09,34;UBERON:0001049,3.92e-08,56;UBERON:0005068,3.92e-08,56;UBERON:0006241,3.92e-08,56;UBERON:0007135,3.92e-08,56;UBERON:0003714,7.52e-08,2;UBERON:0005162,7.52e-08,2;UBERON:0000122,7.52e-08,2;UBERON:0002148,8.60e-08,2;UBERON:0006331,8.60e-08,2;UBERON:0009662,8.60e-08,2;UBERON:0003075,2.64e-07,82;UBERON:0007284,2.64e-07,82;UBERON:0002346,6.10e-07,86;UBERON:0002791,8.83e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,3.90419561572865,0.773288812777695,2.34522771468088,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,1.23764249880882,0,0,0,0.096670718292122,0,0,0,0,0,0,1.4245125703478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,0,0,0.556608588971108,3.99227596002388,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.593042257361244,0.617819694732514,1.46190729307638,0.134802265961354,0,0,0,0,0,0,0,6.42752799424029,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.546746009922222,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.1251909307065,0.573409195690071,0.554645257684261,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.323474434190045,0,0,0,0,0.991486114072017,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,0.205116364240755,6.80593579798639,0.138314504928436,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0,0.253663240775627,5.4697480901822,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.40781839786099,0.197318320688547,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0.109940516745429,0.603851374266694,0.154348316215889,0,0,0,0,0.392616934229891,2.37637120261669,0,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.271965960763659,6.54526035510566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@MAST2 | |||
}} |
Revision as of 18:22, 10 January 2014
Short description: | p6@MAST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAST2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000456625, ENST00000468212, uc001cox.1, uc001coy.1_5end |
EntrezGene: | MAST2 |
HGNC: | 19035 |
UniProt: | E9PBM6A0JLR0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.31e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.84e-14 | 1 |
midbrain nucleus | 1.84e-14 | 1 |
regional part of midbrain | 1.84e-14 | 1 |
midbrain | 1.84e-14 | 1 |
presumptive midbrain | 1.84e-14 | 1 |
midbrain neural tube | 1.84e-14 | 1 |
cranial nerve II | 2.11e-14 | 1 |
cranial nerve | 2.11e-14 | 1 |
nerve trunk | 2.11e-14 | 1 |
nerve connecting eye with brain | 2.11e-14 | 1 |
nerve | 2.11e-14 | 1 |
retinal neural layer | 2.11e-14 | 1 |
presumptive neural retina | 2.11e-14 | 1 |
nervous system | 2.34e-13 | 89 |
central nervous system | 4.46e-12 | 81 |
brain grey matter | 1.61e-09 | 34 |
gray matter | 1.61e-09 | 34 |
neural tube | 3.92e-08 | 56 |
neural rod | 3.92e-08 | 56 |
future spinal cord | 3.92e-08 | 56 |
neural keel | 3.92e-08 | 56 |
neural tissue | 7.52e-08 | 2 |
multi cell component structure | 7.52e-08 | 2 |
neuron projection bundle | 7.52e-08 | 2 |
locus ceruleus | 8.60e-08 | 2 |
brainstem nucleus | 8.60e-08 | 2 |
hindbrain nucleus | 8.60e-08 | 2 |
neural plate | 2.64e-07 | 82 |
presumptive neural plate | 2.64e-07 | 82 |
neurectoderm | 6.10e-07 | 86 |
regional part of telencephalon | 8.83e-07 | 32 |