FFCP PHASE1:Hg19::chr2:17721230..17721255,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12722 | |||
|TSSclassifier=strong | |||
|UniProt=E7ER47 | |||
|association_with_transcript=0bp_to_ENST00000457525_5end | |||
|description=CAGE_peak_4_at_VSNL1_5end | |||
|id=chr2:17721230..17721255,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.19e-11!8;CL:0000223!2.57e-10!59;CL:0002076!6.33e-10!43;CL:0000221!2.31e-08!71;CL:0000540!2.70e-08!6;CL:0000031!2.70e-08!6;CL:0000404!2.70e-08!6;CL:0002251!9.44e-08!21;CL:0002319!1.68e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.43e-12;5!CL:0000540;2.17e-11;6!CL:0000404;2.17e-11;6!CL:0000039;6.89e-07;7!CL:0000586;6.89e-07;7!CL:0000047;9.06e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.95e-16,8;CL:0002322,6.70e-12,5;CL:0000540,1.91e-11,6;CL:0000031,1.91e-11,6;CL:0000404,1.91e-11,6;CL:0000221,4.47e-07,72;CL:0000039,6.86e-07,7;CL:0000586,6.86e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;2.17e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!7.49e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.76e-28!82;UBERON:0000073!2.40e-28!94;UBERON:0001016!2.40e-28!94;UBERON:0005743!2.45e-27!86;UBERON:0004121!5.52e-26!169;UBERON:0001869!3.87e-25!32;UBERON:0001893!6.29e-25!34;UBERON:0000924!8.57e-25!173;UBERON:0006601!8.57e-25!173;UBERON:0001049!2.18e-24!57;UBERON:0005068!2.18e-24!57;UBERON:0006241!2.18e-24!57;UBERON:0007135!2.18e-24!57;UBERON:0002020!2.74e-24!34;UBERON:0003528!2.74e-24!34;UBERON:0002791!9.02e-24!33;UBERON:0000153!6.84e-22!129;UBERON:0007811!6.84e-22!129;UBERON:0000033!7.26e-22!123;UBERON:0002616!1.13e-21!59;UBERON:0003080!3.76e-21!42;UBERON:0000956!4.19e-21!25;UBERON:0000203!4.19e-21!25;UBERON:0002780!2.43e-20!41;UBERON:0001890!2.43e-20!41;UBERON:0006240!2.43e-20!41;UBERON:0000955!7.24e-20!69;UBERON:0006238!7.24e-20!69;UBERON:0001950!2.57e-19!20;UBERON:0002619!1.24e-18!22;UBERON:0003075!4.44e-15!86;UBERON:0007284!4.44e-15!86;UBERON:0003056!5.49e-14!61;UBERON:0002346!8.23e-14!90;UBERON:0007023!9.86e-14!115;UBERON:0000922!1.95e-10!612;UBERON:0000468!2.46e-09!659;UBERON:0000200!8.32e-09!6;UBERON:0000475!1.16e-08!365;UBERON:0002050!4.33e-08!605;UBERON:0005423!4.33e-08!605;UBERON:0000064!4.46e-08!219;UBERON:0000923!9.64e-08!604;UBERON:0005291!9.64e-08!604;UBERON:0006598!9.64e-08!604;UBERON:0002532!9.64e-08!604;UBERON:0000467!1.01e-07!625;UBERON:0000480!1.19e-07!626;UBERON:0004111!4.48e-07!241;UBERON:0001872!4.58e-07!5;UBERON:0000481!4.79e-07!347;UBERON:0000166!9.84e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;3.54e-29;20!UBERON:0000956;8.05e-29;25!UBERON:0000203;8.05e-29;25!UBERON:0002619;2.92e-26;22!UBERON:0001869;2.21e-24;32!UBERON:0001893;2.92e-23;34!UBERON:0002791;1.95e-21;32!UBERON:0003528;4.26e-20;34!UBERON:0002020;4.26e-20;34!UBERON:0000200;1.36e-16;6!UBERON:0002780;8.82e-13;41!UBERON:0001890;8.82e-13;41!UBERON:0001870;2.93e-09;3!UBERON:0001872;4.04e-09;5!UBERON:0002021;6.21e-09;5!UBERON:0000073;1.26e-08;53!UBERON:0002616;1.26e-08;53!UBERON:0001017;9.13e-08;75!UBERON:0000974;4.34e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.48e-29,20;UBERON:0000956,3.83e-29,25;UBERON:0000203,3.83e-29,25;UBERON:0001869,1.79e-27,32;UBERON:0002619,1.33e-26,22;UBERON:0001893,1.39e-25,34;UBERON:0002791,1.72e-24,32;UBERON:0003528,8.63e-23,34;UBERON:0002020,8.63e-23,34;UBERON:0001017,3.11e-21,81;UBERON:0002780,2.15e-20,41;UBERON:0001890,2.15e-20,41;UBERON:0003080,2.15e-20,41;UBERON:0006240,2.15e-20,41;UBERON:0001016,2.39e-18,89;UBERON:0000200,1.26e-16,6;UBERON:0000073,1.15e-14,53;UBERON:0002616,1.15e-14,53;UBERON:0004121,2.52e-14,171;UBERON:0000924,2.52e-14,171;UBERON:0006601,2.52e-14,171;UBERON:0001049,1.28e-13,56;UBERON:0005068,1.28e-13,56;UBERON:0006241,1.28e-13,56;UBERON:0007135,1.28e-13,56;UBERON:0011216,3.03e-13,223;UBERON:0000955,1.03e-12,68;UBERON:0006238,1.03e-12,68;UBERON:0003056,4.19e-12,61;UBERON:0010371,2.18e-09,104;UBERON:0001870,2.60e-09,3;UBERON:0001872,3.18e-09,5;UBERON:0002021,6.11e-09,5;UBERON:0003075,8.40e-08,82;UBERON:0007284,8.40e-08,82;UBERON:0002346,3.13e-07,86;UBERON:0007023,3.15e-07,114;UBERON:0002702,9.89e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0,1.43117993565528,1.36874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.773043412653187,0.545492241181669,0.573609190778008,1.21973706129595,1.45782745153634,1.51052125730374,1.24393266018445,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,3.73150970389327,0,0.301586917234893,2.31471112896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,3.68615252830205,0.53735113621709,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1637849688985,2.60279707715243,0.773288812777695,1.34013012267479,1.91381625495949,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.725156697549733,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,1.28197250745681,2.0627374980147,2.29706215198469,2.60024098414608,0,0,0,0,0,0,0.145016693914229,0,0,1.32227932288782,0.960950336825531,1.78657797492418,0.4046311234222,0,0,0.6970372701606,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,2.17781969722645,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.98849729306303,0,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0.111308705022906,0,0,0,1.10513566212459,0,0.511343412510774,0,0,0,0,0,0,0,0,1.93866549219044,2.41197055220813,0,0,0,0.724999575434793,2.61724931056649,0,0,1.03423011972439,0,0,0,0.482385754501632,0,0.110579259931225,0,2.4132393686937,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.67401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95984794828755,0.69647365264322,0,0,0,0,0,1.55182426381471,0,0,0,0,3.98858014522036,0,0.240476460754601,0,0,0.144090417154106,0,0,1.58460277786965,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0.446342914883745,0.201550417460179,0,1.16495949527454,13.9446232683786,12.4447946155561,14.2895512970872,0,0,0,0.136203406111576,4.1795818600905,8.66498450562573,5.81616473240859,0,0,1.88323625639876,2.34804281319486,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.66116300871345,0,0,0,0.157204305099666,0,0,0,0,1.91502377331055,0,0,0,0,0.471162288750703,7.08854543973589,4.27091927156871,2.3786276834235,0,0.221858103073705,0.620964029413834,0,0,0,0,0,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.559518030877778,0.622077260032973,0.127894371303652,0,0,0.655257829152084,0,0,0,0.558644917973244,0,0,0,0,0,1.47727217721857,7.08482881627925,2.23487402680012,2.05116364240755,0.252071696221718,1.9364030689981,0.645902582527404,0,0.588886311006154,11.4430631647308,1.83428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,3.71456715401171,4.68646859168308,2.89361515101658,2.15613754659283,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.679697329768317,2.63091094251396,0,0,0,0.785577949580009,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.85359238546975,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,4.41676051268593,1.21917924982269,0,0,0,3.88568794447312,0,0,0,9.71336305535056,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0,0,0,0,0.892769693028288,1.05868461514708,0.240724100067505,0,0,0,0,1.69978725477287,0.872701380680755,0,0,0,0,0,0,0,3.3656313814854,4.54269588951453,4.96232457488162,9.27617895381788,0,0.267964130156178,0,0.310298987585686,1.0661699095049,1.1903221573187,0,0,0.672791175483681,0,0,2.8303177226605,2.05339980651169,0.673520530145875,0.502055437748735,0.332660356546013,3.01192093860606,0,0,0.179650404213174,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p4@VSNL1 | |||
}} |
Revision as of 01:51, 21 January 2014
Short description: | p4@VSNL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VSNL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457525_5end |
EntrezGene: | VSNL1 |
HGNC: | 12722 |
UniProt: | E7ER47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.95e-16 | 8 |
embryonic stem cell | 6.70e-12 | 5 |
neuron | 1.91e-11 | 6 |
neuroblast | 1.91e-11 | 6 |
electrically signaling cell | 1.91e-11 | 6 |
ectodermal cell | 4.47e-07 | 72 |
germ line cell | 6.86e-07 | 7 |
germ cell | 6.86e-07 | 7 |