FFCP PHASE1:Mm9::chr13:100204205..100204229,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=158|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:100204205..100204229,-|id=chr13:100204205..100204229,-|ontology_enrichment_celltype=CL:0000117!3.22e-13!23;CL:0000337!3.22e-13!23;CL:0000540!1.14e-11!33;CL:0000047!1.14e-11!33;CL:0000031!1.14e-11!33;CL:0000404!1.14e-11!33;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0000221!9.29e-07!44;CL:0000133!9.29e-07!44;CL:0002319!9.94e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.94e-18,23;CL:0000337,5.94e-18,23;CL:0000540,4.69e-13,33;CL:0000047,4.69e-13,33;CL:0000031,4.69e-13,33;CL:0000404,4.69e-13,33;CL:0000393,1.27e-09,39;CL:0000211,1.27e-09,39;CL:0002319,6.34e-08,43;CL:0000221,1.48e-07,44;CL:0000133,1.48e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.33e-25!71;UBERON:0003075!2.33e-25!71;UBERON:0007284!2.33e-25!71;UBERON:0001017!1.19e-21!73;UBERON:0005743!1.19e-21!73;UBERON:0001049!3.12e-21!52;UBERON:0005068!3.12e-21!52;UBERON:0006241!3.12e-21!52;UBERON:0007135!3.12e-21!52;UBERON:0000073!4.44e-21!75;UBERON:0001016!4.44e-21!75;UBERON:0000033!4.89e-21!63;UBERON:0003056!4.98e-21!49;UBERON:0000955!2.12e-20!50;UBERON:0006238!2.12e-20!50;UBERON:0002616!4.71e-20!49;UBERON:0004121!7.30e-20!102;UBERON:0000924!7.30e-20!102;UBERON:0006601!7.30e-20!102;UBERON:0003080!2.04e-18!40;UBERON:0002780!5.53e-18!39;UBERON:0001890!5.53e-18!39;UBERON:0006240!5.53e-18!39;UBERON:0002020!3.28e-17!34;UBERON:0002791!9.03e-15!29;UBERON:0003528!9.03e-15!29;UBERON:0001893!9.03e-15!29;UBERON:0000956!2.03e-10!21;UBERON:0001869!2.03e-10!21;UBERON:0000203!2.03e-10!21;UBERON:0007811!4.12e-10!86;UBERON:0000025!8.82e-09!114;UBERON:0002619!2.02e-08!17;UBERON:0000153!2.59e-08!94;UBERON:0002021!4.61e-08!10;UBERON:0000411!4.61e-08!10;UBERON:0001950!4.61e-08!10;UBERON:0004111!1.51e-07!122;UBERON:0000468!5.93e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-30,54;UBERON:0002346,4.07e-30,64;UBERON:0003075,4.07e-30,64;UBERON:0007284,4.07e-30,64;UBERON:0001049,1.26e-28,52;UBERON:0005068,1.26e-28,52;UBERON:0006241,1.26e-28,52;UBERON:0007135,1.26e-28,52;UBERON:0001017,2.11e-27,73;UBERON:0001016,4.25e-26,75;UBERON:0003056,6.50e-26,49;UBERON:0010314,9.31e-26,92;UBERON:0000955,1.13e-24,47;UBERON:0006238,1.13e-24,47;UBERON:0002616,3.39e-24,46;UBERON:0010371,7.37e-24,73;UBERON:0002020,8.50e-24,34;UBERON:0003080,1.28e-23,40;UBERON:0004121,3.88e-23,95;UBERON:0000924,3.88e-23,95;UBERON:0006601,3.88e-23,95;UBERON:0002780,5.17e-23,39;UBERON:0001890,5.17e-23,39;UBERON:0006240,5.17e-23,39;UBERON:0003528,2.34e-20,29;UBERON:0002791,2.34e-20,29;UBERON:0001893,2.34e-20,29;UBERON:0000956,3.19e-14,21;UBERON:0001869,3.19e-14,21;UBERON:0000203,3.19e-14,21;UBERON:0000025,5.88e-12,114;UBERON:0002619,2.06e-11,17;UBERON:0002021,1.05e-10,10;UBERON:0000411,1.05e-10,10;UBERON:0001950,1.05e-10,10;UBERON:0004111,5.97e-10,122;UBERON:0002420,2.46e-07,8;UBERON:0007245,2.46e-07,8;UBERON:0010009,2.46e-07,8;UBERON:0010011,2.46e-07,8;UBERON:0000454,2.46e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,0,2.63011399117477,11.1088105647127,3.80298842103708,0,0,0,0,0,0.299600110518405,0,7.36196247390191,6.88530285491622,3.15487442027073,1.71390590642282,1.54607978666129,2.81728838194394,3.83381884072945,3.67687514644008,4.40463523997555,12.0026097800076,13.3637683932932,3.95658863190582,8.87430142943374,11.9810075228055,2.51264699101243,5.6276261003168,9.93188610549266,11.7851434189467,16.3727432918968,5.40558392893372,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.852151612890289,0.519572009205738,0.70667914902068,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0.520455980298408,0.913396434936424,1.15307748628029,3.46662073271032,2.82212897125692,0.753999547978053,0,0.433798070759735,0,0.161766849947409,0.662524555381181,0.484875253135222,0,1.46390398505774,2.30391377494801,0.255457055208591,0,0,0,2.84602214869163,1.83000241127451,16.712028831011,2.9550134432687,6.13717097592793,3.74018480207208,6.81413304884582,2.54598409625791,0.622034853050465,0.252722758433675,0.841767423545896,4.03373373184381,0,0.900310649026746,10.5493372485001,4.55844544313897,7.30248205623644,5.34099829990454,5.69147415625834,0,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0,0,0.199034266818493,0,0,0,0.414251545071004,2.11073453982987,1.44049649168812,0.710234206755631,1.57411385397923,3.08534225774756,1.86027155800326,1.60964040839772,1.05088808130453,1.48103864922132,2.46251196118643,0.405344047729279,0.146199987425332,0.439100230582101,0,1.89260953707715,21.4041593748912,0,0.264450566663544,1.49301775374664,3.0190767341857,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,1.00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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:100204205..100204229,- | |||
|description=CAGE_peak_at_chr13:100204205..100204229,- | |||
|id=chr13:100204205..100204229,- | |||
|ontology_enrichment_celltype=CL:0000117!3.22e-13!23;CL:0000337!3.22e-13!23;CL:0000540!1.14e-11!33;CL:0000047!1.14e-11!33;CL:0000031!1.14e-11!33;CL:0000404!1.14e-11!33;CL:0000393!2.87e-08!39;CL:0000211!2.87e-08!39;CL:0000221!9.29e-07!44;CL:0000133!9.29e-07!44;CL:0002319!9.94e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.94e-18,23;CL:0000337,5.94e-18,23;CL:0000540,4.69e-13,33;CL:0000047,4.69e-13,33;CL:0000031,4.69e-13,33;CL:0000404,4.69e-13,33;CL:0000393,1.27e-09,39;CL:0000211,1.27e-09,39;CL:0002319,6.34e-08,43;CL:0000221,1.48e-07,44;CL:0000133,1.48e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.33e-25!71;UBERON:0003075!2.33e-25!71;UBERON:0007284!2.33e-25!71;UBERON:0001017!1.19e-21!73;UBERON:0005743!1.19e-21!73;UBERON:0001049!3.12e-21!52;UBERON:0005068!3.12e-21!52;UBERON:0006241!3.12e-21!52;UBERON:0007135!3.12e-21!52;UBERON:0000073!4.44e-21!75;UBERON:0001016!4.44e-21!75;UBERON:0000033!4.89e-21!63;UBERON:0003056!4.98e-21!49;UBERON:0000955!2.12e-20!50;UBERON:0006238!2.12e-20!50;UBERON:0002616!4.71e-20!49;UBERON:0004121!7.30e-20!102;UBERON:0000924!7.30e-20!102;UBERON:0006601!7.30e-20!102;UBERON:0003080!2.04e-18!40;UBERON:0002780!5.53e-18!39;UBERON:0001890!5.53e-18!39;UBERON:0006240!5.53e-18!39;UBERON:0002020!3.28e-17!34;UBERON:0002791!9.03e-15!29;UBERON:0003528!9.03e-15!29;UBERON:0001893!9.03e-15!29;UBERON:0000956!2.03e-10!21;UBERON:0001869!2.03e-10!21;UBERON:0000203!2.03e-10!21;UBERON:0007811!4.12e-10!86;UBERON:0000025!8.82e-09!114;UBERON:0002619!2.02e-08!17;UBERON:0000153!2.59e-08!94;UBERON:0002021!4.61e-08!10;UBERON:0000411!4.61e-08!10;UBERON:0001950!4.61e-08!10;UBERON:0004111!1.51e-07!122;UBERON:0000468!5.93e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.17e-30,54;UBERON:0002346,4.07e-30,64;UBERON:0003075,4.07e-30,64;UBERON:0007284,4.07e-30,64;UBERON:0001049,1.26e-28,52;UBERON:0005068,1.26e-28,52;UBERON:0006241,1.26e-28,52;UBERON:0007135,1.26e-28,52;UBERON:0001017,2.11e-27,73;UBERON:0001016,4.25e-26,75;UBERON:0003056,6.50e-26,49;UBERON:0010314,9.31e-26,92;UBERON:0000955,1.13e-24,47;UBERON:0006238,1.13e-24,47;UBERON:0002616,3.39e-24,46;UBERON:0010371,7.37e-24,73;UBERON:0002020,8.50e-24,34;UBERON:0003080,1.28e-23,40;UBERON:0004121,3.88e-23,95;UBERON:0000924,3.88e-23,95;UBERON:0006601,3.88e-23,95;UBERON:0002780,5.17e-23,39;UBERON:0001890,5.17e-23,39;UBERON:0006240,5.17e-23,39;UBERON:0003528,2.34e-20,29;UBERON:0002791,2.34e-20,29;UBERON:0001893,2.34e-20,29;UBERON:0000956,3.19e-14,21;UBERON:0001869,3.19e-14,21;UBERON:0000203,3.19e-14,21;UBERON:0000025,5.88e-12,114;UBERON:0002619,2.06e-11,17;UBERON:0002021,1.05e-10,10;UBERON:0000411,1.05e-10,10;UBERON:0001950,1.05e-10,10;UBERON:0004111,5.97e-10,122;UBERON:0002420,2.46e-07,8;UBERON:0007245,2.46e-07,8;UBERON:0010009,2.46e-07,8;UBERON:0010011,2.46e-07,8;UBERON:0000454,2.46e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0.514518872071894,0,0,2.63011399117477,11.1088105647127,3.80298842103708,0,0,0,0,0,0.299600110518405,0,7.36196247390191,6.88530285491622,3.15487442027073,1.71390590642282,1.54607978666129,2.81728838194394,3.83381884072945,3.67687514644008,4.40463523997555,12.0026097800076,13.3637683932932,3.95658863190582,8.87430142943374,11.9810075228055,2.51264699101243,5.6276261003168,9.93188610549266,11.7851434189467,16.3727432918968,5.40558392893372,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0.280888840263504,0.852151612890289,0.519572009205738,0.70667914902068,0.704217098883403,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.11418387971906,0,0.29688427812965,0.520455980298408,0.913396434936424,1.15307748628029,3.46662073271032,2.82212897125692,0.753999547978053,0,0.433798070759735,0,0.161766849947409,0.662524555381181,0.484875253135222,0,1.46390398505774,2.30391377494801,0.255457055208591,0,0,0,2.84602214869163,1.83000241127451,16.712028831011,2.9550134432687,6.13717097592793,3.74018480207208,6.81413304884582,2.54598409625791,0.622034853050465,0.252722758433675,0.841767423545896,4.03373373184381,0,0.900310649026746,10.5493372485001,4.55844544313897,7.30248205623644,5.34099829990454,5.69147415625834,0,0.189106080167819,0.175951124163949,0.43839146485515,1.11218899690239,0,0,0.199034266818493,0,0,0,0.414251545071004,2.11073453982987,1.44049649168812,0.710234206755631,1.57411385397923,3.08534225774756,1.86027155800326,1.60964040839772,1.05088808130453,1.48103864922132,2.46251196118643,0.405344047729279,0.146199987425332,0.439100230582101,0,1.89260953707715,21.4041593748912,0,0.264450566663544,1.49301775374664,3.0190767341857,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,1.00534083520108,0.596869416123452,1.55971269695296,0,1.08069024937347,0.398282546508734,0,1.14248512609729,0,0.407302655690628,0.969762435838129,0.420814919341911,0.252946148497029,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0.744281895337007,0.624075346229121,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,1.17345124144251,0.335012514883631,0,1.17080188714679,0.315270288212382,1.99318220683897,1.59454768657487,0.491589944147214,1.03610989119537,0.723245292907558,0,0,0,0,3.37156238974363,7.2671245687166,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,1.93881057959519,0.238968797952552,1.33679204449436,0.566153061577665,0.404810701674894,4.38383786866968,0,1.92792789853084,0.141940085208269,0.890328018336276,0.651547837414304,0.824850614862677,0,0.728341908464944,0,0.754420319023592,0.295301892880773,0,0,0.727067458955011,0.712994756769443,0.632073515871632,0,0,1.36175842301515,5.94201610303324,1.55230420539305,1.71469628025274,0.709360934569094,3.92411398724555,3.45552943264454,0.913394847343798,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0,0.301564624640779,0.238744688006273,0,0.291480836629851,5.00648315428376,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,2.26811215725783,3.55450103224597,1.09181281873089,2.42755823492677,0.991841468704031,1.04702376793612,0.518459893167171,0,0,0.149516546043979,0.496375471371293,0.972255941720238,1.03327858782185,2.36538575687089,0.938857909166032,2.0832701575032,1.8874681996628,1.44950472495604,0.288030006257865,0,0.810900861160657,0.513554785824136,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0,0.221985953374065,0.0897138566094757,0.335769232728157,0.19318959403219,0,0.183151624267265,0.214368379079066,0,18.0720589637461,20.2543104063158,24.0616115644547,23.0283264340541,6.85082519770642,8.3093328712867,8.77529250301348,8.10578165803597,12.6879874515577,8.80192529978094,4.67043064128795,4.38927360741134,0.853668028770671,1.21553358534147,0.209613162627982,0,0.44449345560323,1.03017528619447,0.962757628775446,1.26348605881899,0,0.754505365544305,1.21733959710847,0.704276676453562,0.804096565378586,1.42888107384922,1.62238056322798,0.964546102318525,2.88460130562315,1.03039244094078,3.08582327146874,1.95223386775271,1.90748951957857,1.30811774969096,0.752875043322645,1.18460451048347,1.82927972872773,3.94604567156764,1.49384525230448,2.24456908663095,1.06771516311757,1.97008964751127,2.45538625901814,1.23949472948773,0,0.749431733813838,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p@chr13:100204205..100204229,- | |||
}} |
Latest revision as of 12:27, 5 August 2015
Short description: | p@chr13:100204205..100204229, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100204205..100204229, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.94e-18 | 23 |
neuroblast (sensu Vertebrata) | 5.94e-18 | 23 |
neuron | 4.69e-13 | 33 |
neuronal stem cell | 4.69e-13 | 33 |
neuroblast | 4.69e-13 | 33 |
electrically signaling cell | 4.69e-13 | 33 |
electrically responsive cell | 1.27e-09 | 39 |
electrically active cell | 1.27e-09 | 39 |
neural cell | 6.34e-08 | 43 |
ectodermal cell | 1.48e-07 | 44 |
neurectodermal cell | 1.48e-07 | 44 |