FFCP PHASE1:Mm9::chr15:85412357..85412379,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22422|HGNC=|UniProt=P28047,F7CW13,Q6PDY6|association_with_transcript=-106bp_to_ENSMUST00000023015,ENSMUST00000165521,NM_009528,uc007xdf.2,uc007xdg.2_5end|description=CAGE_peak_3_at_Wnt7b_5end|id=chr15:85412357..85412379,-|ontology_enrichment_celltype=CL:0000117!3.47e-14!23;CL:0000337!3.47e-14!23;CL:0000540!8.44e-09!33;CL:0000047!8.44e-09!33;CL:0000031!8.44e-09!33;CL:0000404!8.44e-09!33;CL:0000221!5.00e-08!44;CL:0000133!5.00e-08!44;CL:0002319!1.35e-07!43;CL:0002609!5.13e-07!6;CL:0000393!8.90e-07!39;CL:0000211!8.90e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-22,23;CL:0000337,3.49e-22,23;CL:0002609,1.28e-16,6;CL:0000540,2.18e-14,33;CL:0000047,2.18e-14,33;CL:0000031,2.18e-14,33;CL:0000404,2.18e-14,33;CL:0002319,6.98e-12,43;CL:0000393,1.22e-11,39;CL:0000211,1.22e-11,39;CL:0000221,1.58e-11,44;CL:0000133,1.58e-11,44;CL:0002321,5.20e-09,70;CL:0002608,6.88e-09,3;CL:0000349,1.17e-08,3;CL:0000351,1.17e-08,3;CL:0002613,1.39e-08,3;CL:0000120,2.93e-08,3;CL:0000068,3.28e-08,3;CL:0002202,3.28e-08,3;CL:0000069,3.28e-08,3;CL:0002632,3.28e-08,3;CL:0002368,3.28e-08,3;CL:0000307,3.28e-08,3;CL:0000377,3.28e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!1.92e-09!49;UBERON:0000033!2.21e-09!63;UBERON:0002020!2.51e-09!34;UBERON:0004121!3.19e-08!102;UBERON:0000924!3.19e-08!102;UBERON:0006601!3.19e-08!102;UBERON:0002791!5.21e-08!29;UBERON:0003528!5.21e-08!29;UBERON:0001893!5.21e-08!29;UBERON:0002780!1.46e-07!39;UBERON:0001890!1.46e-07!39;UBERON:0006240!1.46e-07!39;UBERON:0001017!1.70e-07!73;UBERON:0005743!1.70e-07!73;UBERON:0000073!2.22e-07!75;UBERON:0001016!2.22e-07!75;UBERON:0003080!3.68e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.07e-10,29;UBERON:0002791,1.07e-10,29;UBERON:0001893,1.07e-10,29;UBERON:0002020,3.15e-10,34;UBERON:0003056,1.11e-09,49;UBERON:0000358,1.17e-08,3;UBERON:0000307,1.17e-08,3;UBERON:0007010,1.17e-08,3;UBERON:0002780,1.58e-08,39;UBERON:0001890,1.58e-08,39;UBERON:0006240,1.58e-08,39;UBERON:0000369,1.84e-08,5;UBERON:0002435,1.84e-08,5;UBERON:0000204,1.84e-08,5;UBERON:0010082,1.84e-08,5;UBERON:0001017,2.56e-08,73;UBERON:0003080,3.04e-08,40;UBERON:0003126,3.28e-08,3;UBERON:0001005,3.28e-08,3;UBERON:0007196,3.28e-08,3;UBERON:0001558,3.28e-08,3;UBERON:0001016,5.55e-08,75;UBERON:0004121,7.86e-08,95;UBERON:0000924,7.86e-08,95;UBERON:0006601,7.86e-08,95;UBERON:0002420,1.39e-07,8;UBERON:0007245,1.39e-07,8;UBERON:0010009,1.39e-07,8;UBERON:0010011,1.39e-07,8;UBERON:0000454,1.39e-07,8;UBERON:0002346,1.52e-07,64;UBERON:0003075,1.52e-07,64;UBERON:0007284,1.52e-07,64;UBERON:0000073,2.62e-07,54;UBERON:0002616,8.32e-07,46|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,1.90149421051854,0.677689064138264,0,0,0,0,0.599200221036809,3.45796474789399,12.0279950277834,9.18040380655497,13.4607975264884,0.285650984403804,1.10434270475807,5.26710436624302,3.06705507258356,5.51531271966013,1.10115880999389,0.510749352340751,0.307213066512487,4.61602007055678,2.01272815925301,4.16730696445408,0,0.56276261003168,1.06958773443767,0,0.427115042397309,0.931997229126503,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,3.24736561516821,2.53359865475099,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88481528169297,0.869121600961382,0.255715457330331,0,0.324482526135515,0,0.248813941220186,0.252722758433675,0.210441855886474,0.650602214813519,0,0.900310649026746,0.30140963567143,1.29269348387523,1.15302348256365,1.12442069471675,0,0,0.378212160335639,0,0.43839146485515,0.278047249225598,1.74126083261083,1.02891068203972,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,2.77842453424068,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0.193952487167626,0.420814919341911,0.505892296994058,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,1.89491411770485,1.30371981153621,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0,0,0,0.906970670894253,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.03486947026204,0.428674070063185,0,0,0.164549020602121,0,0,2.1183207086382,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,4.66170502085536,3.49884040776955,2.68615386182526,0,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,3.63255716544618,1.99512436700516,1.36586884603307,0.729320151204882,0.628839487883947,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.320125762024346,0.114870937911227,0,0.463537303779422,0.578727661391115,0,0.735994600671987,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.407412341537585,0,0,0.394017929502254,0,0.619747364743864,0.385813221962283,0,0,0.429742108096597,0,0,0|short_description=p3@Wnt7b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22422 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P28047,uniprot:F7CW13,uniprot:Q6PDY6 | |||
|association_with_transcript=-106bp_to_ENSMUST00000023015,ENSMUST00000165521,NM_009528,uc007xdf.2,uc007xdg.2_5end | |||
|cluster_id=chr15:85412357..85412379,- | |||
|description=CAGE_peak_3_at_Wnt7b_5end | |||
|id=chr15:85412357..85412379,- | |||
|ontology_enrichment_celltype=CL:0000117!3.47e-14!23;CL:0000337!3.47e-14!23;CL:0000540!8.44e-09!33;CL:0000047!8.44e-09!33;CL:0000031!8.44e-09!33;CL:0000404!8.44e-09!33;CL:0000221!5.00e-08!44;CL:0000133!5.00e-08!44;CL:0002319!1.35e-07!43;CL:0002609!5.13e-07!6;CL:0000393!8.90e-07!39;CL:0000211!8.90e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.49e-22,23;CL:0000337,3.49e-22,23;CL:0002609,1.28e-16,6;CL:0000540,2.18e-14,33;CL:0000047,2.18e-14,33;CL:0000031,2.18e-14,33;CL:0000404,2.18e-14,33;CL:0002319,6.98e-12,43;CL:0000393,1.22e-11,39;CL:0000211,1.22e-11,39;CL:0000221,1.58e-11,44;CL:0000133,1.58e-11,44;CL:0002321,5.20e-09,70;CL:0002608,6.88e-09,3;CL:0000349,1.17e-08,3;CL:0000351,1.17e-08,3;CL:0002613,1.39e-08,3;CL:0000120,2.93e-08,3;CL:0000068,3.28e-08,3;CL:0002202,3.28e-08,3;CL:0000069,3.28e-08,3;CL:0002632,3.28e-08,3;CL:0002368,3.28e-08,3;CL:0000307,3.28e-08,3;CL:0000377,3.28e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!1.92e-09!49;UBERON:0000033!2.21e-09!63;UBERON:0002020!2.51e-09!34;UBERON:0004121!3.19e-08!102;UBERON:0000924!3.19e-08!102;UBERON:0006601!3.19e-08!102;UBERON:0002791!5.21e-08!29;UBERON:0003528!5.21e-08!29;UBERON:0001893!5.21e-08!29;UBERON:0002780!1.46e-07!39;UBERON:0001890!1.46e-07!39;UBERON:0006240!1.46e-07!39;UBERON:0001017!1.70e-07!73;UBERON:0005743!1.70e-07!73;UBERON:0000073!2.22e-07!75;UBERON:0001016!2.22e-07!75;UBERON:0003080!3.68e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.07e-10,29;UBERON:0002791,1.07e-10,29;UBERON:0001893,1.07e-10,29;UBERON:0002020,3.15e-10,34;UBERON:0003056,1.11e-09,49;UBERON:0000358,1.17e-08,3;UBERON:0000307,1.17e-08,3;UBERON:0007010,1.17e-08,3;UBERON:0002780,1.58e-08,39;UBERON:0001890,1.58e-08,39;UBERON:0006240,1.58e-08,39;UBERON:0000369,1.84e-08,5;UBERON:0002435,1.84e-08,5;UBERON:0000204,1.84e-08,5;UBERON:0010082,1.84e-08,5;UBERON:0001017,2.56e-08,73;UBERON:0003080,3.04e-08,40;UBERON:0003126,3.28e-08,3;UBERON:0001005,3.28e-08,3;UBERON:0007196,3.28e-08,3;UBERON:0001558,3.28e-08,3;UBERON:0001016,5.55e-08,75;UBERON:0004121,7.86e-08,95;UBERON:0000924,7.86e-08,95;UBERON:0006601,7.86e-08,95;UBERON:0002420,1.39e-07,8;UBERON:0007245,1.39e-07,8;UBERON:0010009,1.39e-07,8;UBERON:0010011,1.39e-07,8;UBERON:0000454,1.39e-07,8;UBERON:0002346,1.52e-07,64;UBERON:0003075,1.52e-07,64;UBERON:0007284,1.52e-07,64;UBERON:0000073,2.62e-07,54;UBERON:0002616,8.32e-07,46 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,1.90149421051854,0.677689064138264,0,0,0,0,0.599200221036809,3.45796474789399,12.0279950277834,9.18040380655497,13.4607975264884,0.285650984403804,1.10434270475807,5.26710436624302,3.06705507258356,5.51531271966013,1.10115880999389,0.510749352340751,0.307213066512487,4.61602007055678,2.01272815925301,4.16730696445408,0,0.56276261003168,1.06958773443767,0,0.427115042397309,0.931997229126503,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,3.24736561516821,2.53359865475099,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88481528169297,0.869121600961382,0.255715457330331,0,0.324482526135515,0,0.248813941220186,0.252722758433675,0.210441855886474,0.650602214813519,0,0.900310649026746,0.30140963567143,1.29269348387523,1.15302348256365,1.12442069471675,0,0,0.378212160335639,0,0.43839146485515,0.278047249225598,1.74126083261083,1.02891068203972,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,2.77842453424068,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0.193952487167626,0.420814919341911,0.505892296994058,0.147610147979602,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,1.89491411770485,1.30371981153621,0.678980343100753,0.469380496577004,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0.141940085208269,0,0.325773918707152,0,0,0,0.906970670894253,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.03486947026204,0.428674070063185,0,0,0.164549020602121,0,0,2.1183207086382,0,0.16488625294148,0.161464426695906,0.361877549568935,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,4.66170502085536,3.49884040776955,2.68615386182526,0,0,0.183151624267265,0.214368379079066,0,0,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0,0,0.453142408984205,0,3.63255716544618,1.99512436700516,1.36586884603307,0.729320151204882,0.628839487883947,0.551530525350042,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.320125762024346,0.114870937911227,0,0.463537303779422,0.578727661391115,0,0.735994600671987,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.407412341537585,0,0,0.394017929502254,0,0.619747364743864,0.385813221962283,0,0,0.429742108096597,0,0,0 | |||
|short_description=p3@Wnt7b | |||
}} |
Revision as of 19:00, 5 August 2015
Short description: | p3@Wnt7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Wnt7b_5end |
Coexpression cluster: | NA |
Association with transcript: | -106bp_to_ENSMUST00000023015, ENSMUST00000165521, NM_009528, uc007xdf.2, uc007xdg.2_5end |
EntrezGene: | 22422 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.49e-22 | 23 |
neuroblast (sensu Vertebrata) | 3.49e-22 | 23 |
neuron of cerebral cortex | 1.28e-16 | 6 |
neuron | 2.18e-14 | 33 |
neuronal stem cell | 2.18e-14 | 33 |
neuroblast | 2.18e-14 | 33 |
electrically signaling cell | 2.18e-14 | 33 |
neural cell | 6.98e-12 | 43 |
electrically responsive cell | 1.22e-11 | 39 |
electrically active cell | 1.22e-11 | 39 |
ectodermal cell | 1.58e-11 | 44 |
neurectodermal cell | 1.58e-11 | 44 |
embryonic cell | 5.20e-09 | 70 |
hippocampal neuron | 6.88e-09 | 3 |
extraembryonic cell | 1.17e-08 | 3 |
trophoblast cell | 1.17e-08 | 3 |
striatum neuron | 1.39e-08 | 3 |
granule cell | 2.93e-08 | 3 |
duct epithelial cell | 3.28e-08 | 3 |
epithelial cell of tracheobronchial tree | 3.28e-08 | 3 |
branched duct epithelial cell | 3.28e-08 | 3 |
epithelial cell of lower respiratory tract | 3.28e-08 | 3 |
respiratory epithelial cell | 3.28e-08 | 3 |
tracheal epithelial cell | 3.28e-08 | 3 |
tracheoblast | 3.28e-08 | 3 |