FFCP PHASE1:Hg19::chr6:138192345..138192366,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |||
|TSSclassifier=strong | |||
|UniProt=F5H7A9,F5GYN2,D3TTY7,F5H1G3,D3TTY5 | |||
|association_with_transcript=0bp_to_ENST00000535332,ENST00000535574,ENST00000536070,ENST00000539356,ENST00000544646_5end | |||
|coexpression_cluster_id=C426 | |||
|description=CAGE_peak_11_at_TNFAIP3_5end | |||
|id=chr6:138192345..138192366,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.16e-33!140;CL:0002057!2.32e-23!42;CL:0000988!8.65e-23!182;CL:0000766!1.25e-22!76;CL:0000037!1.80e-22!172;CL:0000566!1.80e-22!172;CL:0002087!2.19e-22!119;CL:0002031!9.23e-22!124;CL:0000860!1.07e-21!45;CL:0002032!2.74e-20!165;CL:0000837!2.74e-20!165;CL:0000557!7.41e-18!71;CL:0002009!2.24e-17!65;CL:0000839!5.62e-16!70;CL:0002194!5.93e-16!63;CL:0000576!5.93e-16!63;CL:0000040!5.93e-16!63;CL:0000559!5.93e-16!63;CL:0000763!1.62e-14!112;CL:0000049!1.62e-14!112;CL:0000048!3.90e-11!430;CL:0000134!6.97e-11!358;CL:0000723!8.89e-11!436;CL:0000034!1.39e-10!444;CL:0002320!5.84e-10!365;CL:0000219!1.21e-08!390;CL:0000094!2.10e-08!8;CL:0000081!4.99e-07!11;CL:0000624!9.75e-07!6;CL:0000451!9.77e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-27;33!CL:0002057;1.13e-27;33!CL:0000094;2.79e-21;8!CL:0000081;3.01e-19;11!CL:0000473;5.90e-19;39!CL:0000234;5.90e-19;39!CL:0000766;1.56e-17;69!CL:0000576;8.82e-16;48!CL:0000624;5.77e-12;6!CL:0002087;8.17e-11;104!CL:0000738;1.61e-09;136!CL:0000623;1.96e-09;3!CL:0000791;2.88e-09;18!CL:0000789;2.88e-09;18!CL:0002419;2.88e-09;18!CL:0000226;3.70e-09;3!CL:0000775;3.70e-09;3!CL:0000842;3.70e-09;3!CL:0000763;4.68e-09;100!CL:0000767;1.12e-08;3!CL:0000084;6.60e-08;25!CL:0000988;9.10e-08;177!CL:0000771;7.79e-07;2!CL:0001014;8.74e-07;2!CL:0001016;8.74e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.22e-47,136;CL:0000766,2.34e-39,72;CL:0000988,8.05e-38,177;CL:0000037,1.94e-35,168;CL:0000860,3.04e-31,42;CL:0002057,3.04e-31,42;CL:0002032,5.27e-31,161;CL:0000837,5.27e-31,161;CL:0002031,4.57e-30,120;CL:0000557,2.62e-28,67;CL:0002087,3.12e-28,115;CL:0000763,1.47e-26,108;CL:0000049,1.47e-26,108;CL:0000473,1.62e-26,48;CL:0000234,1.62e-26,48;CL:0002009,4.47e-25,61;CL:0000839,1.79e-24,66;CL:0002194,8.38e-22,59;CL:0000576,8.38e-22,59;CL:0000040,8.38e-22,59;CL:0000559,8.38e-22,59;CL:0000094,1.86e-21,8;CL:0000081,2.17e-19,11;CL:0000134,2.29e-14,354;CL:0002320,8.10e-14,361;CL:0000048,3.45e-12,427;CL:0000624,4.28e-12,6;CL:0000034,4.36e-12,441;CL:0000219,6.86e-12,386;CL:0000723,8.11e-12,433;CL:0000623,1.24e-09,3;CL:0000825,1.24e-09,3;CL:0000775,2.33e-09,3;CL:0000791,2.51e-09,18;CL:0000789,2.51e-09,18;CL:0002420,2.51e-09,18;CL:0002419,2.51e-09,18;CL:0000790,2.51e-09,18;CL:0000226,5.57e-09,3;CL:0000842,5.57e-09,3;CL:0000767,1.17e-08,3;CL:0000084,6.24e-08,25;CL:0000827,6.24e-08,25;CL:0001014,7.15e-07,2;CL:0001016,7.15e-07,2;CL:0000771,7.80e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.36e-23;42!CL:0000790;2.88e-09;18 | |||
|ontology_enrichment_disease=DOID:2394!3.04e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.56e-18!102;UBERON:0003061!6.56e-18!102;UBERON:0002193!2.14e-17!112;UBERON:0002371!1.48e-14!80;UBERON:0002405!1.65e-12!115;UBERON:0001474!2.31e-12!86;UBERON:0004765!3.25e-09!101;UBERON:0001434!3.25e-09!101;UBERON:0002384!4.73e-09!375;UBERON:0003081!1.79e-08!216;UBERON:0002204!1.17e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.32e-28,98;UBERON:0003061,3.32e-28,98;UBERON:0002193,2.44e-26,108;UBERON:0002371,4.74e-24,76;UBERON:0001474,9.87e-22,82;UBERON:0002405,2.73e-21,93;UBERON:0004765,4.00e-19,90;UBERON:0001434,1.85e-16,100;UBERON:0002384,4.53e-13,371;UBERON:0003081,5.55e-12,203;UBERON:0002204,2.12e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0.534893840235659,0.656804715599566,0.393553906568396,1.57345710739562,2.30297638858328,1.08371286321253,0,0,0,0,0,0,2.21598163412751,7.62068900386538,6.94434786290726,0,0,0,0.290796477559129,0.755751887377619,0,2.32429036905685,2.87817521615278,0.929119112685311,2.58923153089935,1.7931249457037,2.36482229888585,9.99762474136194,9.03678557017357,4.06279459783025,1.50593871634084,0.818718450173537,0.674170453335254,7.03992952453076,4.8139354061414,9.59005688698562,0.329851300186716,0.398927315243264,0.426224750532694,8.41606792022894,7.94339314567596,4.9825779919646,2.76373531782418,1.0429658368404,0.868755378820466,6.65939452896706,3.31449872388808,4.1140110367315,0.211255286311942,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.764546456250458,0,4.48406850385229,0,2.16380747125216,16.5064520354649,8.42966145897988,0,0.977766799900771,0,0,0.445641827540694,1.76763544484902,0.886135578334485,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0.289803085735052,1.03800594213442,1.33770414044857,1.04535523804977,0,1.53288197440768,4.12352934579156,0.759059076058509,0,0,0,0.150575119077773,0,0,0,0,5.24177532384304,9.89528724398977,5.50332734754636,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0.132957960518865,1.19245312152671,1.14398982156026,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,15.511210565933,0,0,0,1.19168262731897,0.573673241497627,0,0.560677600142307,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0,0,0,0,0,0.433099343283221,1.38895653772983,0.761016608938393,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,1.65862492432618,5.6206781832615,1.00993946741104,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,1.97030760201927,10.7813787429759,3.7219480521127,0,1.30139853857622,0,0,0,5.99205619157746,2.99161459204025,1.65766205374414,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,1.03384013061444,5.39285502046542,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,1.03850885836724,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0.715624433709956,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,1.46228093778771,1.05650146756755,0,0,0,0,0,0.876901770507525,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,2.17781969722645,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0.684704037099577,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0.552567831062295,0,0.20453736500431,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,1.91400695839152,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,4.15129580152871,1.11207545051853,1.8795950910982,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0.429226048136571,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,1.5748172408605,9.2856234546954,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.533937062838473,0.628817220398664,0,0,0.197611631897944,0.121792598380896,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0.705797459094515,0,0,0,0,0.554805861502613,0,0,0,0.915360273587694,0.151230923763239,0.310874401165561,1.33069634990671,0.318593534327405,0.899606224327209,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0.450772826991655,0.380805212168795,1.22061219961398,0.909243296012797,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0.2447367045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| |||
|short_description=p11@TNFAIP3 | |||
}} |
Revision as of 14:11, 22 January 2014
Short description: | p11@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TNFAIP3_5end |
Coexpression cluster: | C426_CD4_CD14_Neutrophils_CD8_Natural_Mast_Eosinophils |
Association with transcript: | 0bp_to_ENST00000535332, ENST00000535574, ENST00000536070, ENST00000539356, ENST00000544646_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | F5H7A9F5GYN2D3TTY7F5H1G3D3TTY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.32e-28 | 98 |
blood island | 3.32e-28 | 98 |
hemolymphoid system | 2.44e-26 | 108 |
bone marrow | 4.74e-24 | 76 |
bone element | 9.87e-22 | 82 |
immune system | 2.73e-21 | 93 |
skeletal element | 4.00e-19 | 90 |
skeletal system | 1.85e-16 | 100 |
connective tissue | 4.53e-13 | 371 |
lateral plate mesoderm | 5.55e-12 | 203 |
musculoskeletal system | 2.12e-08 | 167 |