FFCP PHASE1:Mm9::chr1:22812742..22812753,-: Difference between revisions
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{{FFCP|EntrezGene=116837|HGNC=|MCL_coexpression_id=39|UniProt=E9PWP6,Q99NE5,Q6BCW5|association_with_transcript=-179bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end|description=CAGE_peak_6_at_Rims1_5end|id=chr1:22812742..22812753,-|ontology_enrichment_celltype=CL:0000117!1.37e-09!23;CL:0000337!1.37e-09!23;CL:0000540!4.34e-07!33;CL:0000047!4.34e-07!33;CL:0000031!4.34e-07!33;CL:0000404!4.34e-07!33|ontology_enrichment_celltype_v019_2=CL:0002610,1.09e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.20e-23!71;UBERON:0003075!1.20e-23!71;UBERON:0007284!1.20e-23!71;UBERON:0000033!4.18e-23!63;UBERON:0000955!4.74e-23!50;UBERON:0006238!4.74e-23!50;UBERON:0002616!1.65e-22!49;UBERON:0001049!3.43e-22!52;UBERON:0005068!3.43e-22!52;UBERON:0006241!3.43e-22!52;UBERON:0007135!3.43e-22!52;UBERON:0001017!1.85e-20!73;UBERON:0005743!1.85e-20!73;UBERON:0000073!4.11e-20!75;UBERON:0001016!4.11e-20!75;UBERON:0003056!1.76e-19!49;UBERON:0003080!4.05e-18!40;UBERON:0004121!2.32e-17!102;UBERON:0000924!2.32e-17!102;UBERON:0006601!2.32e-17!102;UBERON:0002780!2.51e-17!39;UBERON:0001890!2.51e-17!39;UBERON:0006240!2.51e-17!39;UBERON:0002020!3.68e-17!34;UBERON:0002791!6.39e-16!29;UBERON:0003528!6.39e-16!29;UBERON:0001893!6.39e-16!29;UBERON:0007811!9.89e-13!86;UBERON:0002619!2.26e-11!17;UBERON:0000153!8.82e-11!94;UBERON:0002021!1.06e-10!10;UBERON:0000411!1.06e-10!10;UBERON:0001950!1.06e-10!10;UBERON:0000956!1.77e-10!21;UBERON:0001869!1.77e-10!21;UBERON:0000203!1.77e-10!21;UBERON:0000025!7.07e-08!114;UBERON:0004111!2.56e-07!122;UBERON:0002420!7.58e-07!8;UBERON:0007245!7.58e-07!8;UBERON:0010009!7.58e-07!8;UBERON:0010011!7.58e-07!8;UBERON:0000454!7.58e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.52e-36,10;UBERON:0000411,4.52e-36,10;UBERON:0001950,4.52e-36,10;UBERON:0000073,7.50e-29,54;UBERON:0002616,2.05e-25,46;UBERON:0000955,8.44e-25,47;UBERON:0006238,8.44e-25,47;UBERON:0002619,1.17e-24,17;UBERON:0000956,1.80e-23,21;UBERON:0001869,1.80e-23,21;UBERON:0000203,1.80e-23,21;UBERON:0003080,4.10e-23,40;UBERON:0003528,2.21e-22,29;UBERON:0002791,2.21e-22,29;UBERON:0001893,2.21e-22,29;UBERON:0001049,4.44e-22,52;UBERON:0005068,4.44e-22,52;UBERON:0006241,4.44e-22,52;UBERON:0007135,4.44e-22,52;UBERON:0002780,5.03e-21,39;UBERON:0001890,5.03e-21,39;UBERON:0006240,5.03e-21,39;UBERON:0003056,1.13e-20,49;UBERON:0001017,2.36e-20,73;UBERON:0001016,1.04e-19,75;UBERON:0002346,2.39e-19,64;UBERON:0003075,2.39e-19,64;UBERON:0007284,2.39e-19,64;UBERON:0002020,1.07e-18,34;UBERON:0010371,1.65e-16,73;UBERON:0004121,2.23e-16,95;UBERON:0000924,2.23e-16,95;UBERON:0006601,2.23e-16,95;UBERON:0010314,2.48e-12,92;UBERON:0004684,1.09e-10,3;UBERON:0002275,1.09e-10,3;UBERON:0000025,3.55e-09,114;UBERON:0004111,2.52e-08,122;UBERON:0002950,3.24e-08,4;UBERON:0001891,3.24e-08,4;UBERON:0009616,3.24e-08,4;UBERON:0010286,3.24e-08,4|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.244981598429908,0.383381884072945,0.919218786610021,2.20231761998777,1.40456071893706,1.53606533256243,0.923204014111357,0.457438218012048,0.52091337055676,0.837548997004143,1.68828783009504,1.83357897332172,0.883885756421003,0.569486723196412,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,7.90508151931177,11.1006754611131,0,0,0,0,1.49790639404823,0.457500602818626,0.376963056338593,4.86708096538374,6.13717097592793,1.66230435647648,1.78465389374533,0,0.124406970610093,0,0,0,0,0.180062129805349,0.60281927134286,0.544291993210623,0.640568601424249,0.187403449119458,1.81092359517311,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,1.68231958851302,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,1.26108115284953,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,3.95326289831947,4.14292712856459,6.30185064783336,2.92150409984269,4.11049511862385,7.55393897389701,2.70009000092722,5.85417564191487,9.5159905886683,4.65984280576638,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p6@Rims1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:116837 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PWP6,uniprot:Q99NE5,uniprot:Q6BCW5 | |||
|association_with_transcript=-179bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end | |||
|cluster_id=chr1:22812742..22812753,- | |||
|description=CAGE_peak_6_at_Rims1_5end | |||
|id=chr1:22812742..22812753,- | |||
|ontology_enrichment_celltype=CL:0000117!1.37e-09!23;CL:0000337!1.37e-09!23;CL:0000540!4.34e-07!33;CL:0000047!4.34e-07!33;CL:0000031!4.34e-07!33;CL:0000404!4.34e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.09e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.20e-23!71;UBERON:0003075!1.20e-23!71;UBERON:0007284!1.20e-23!71;UBERON:0000033!4.18e-23!63;UBERON:0000955!4.74e-23!50;UBERON:0006238!4.74e-23!50;UBERON:0002616!1.65e-22!49;UBERON:0001049!3.43e-22!52;UBERON:0005068!3.43e-22!52;UBERON:0006241!3.43e-22!52;UBERON:0007135!3.43e-22!52;UBERON:0001017!1.85e-20!73;UBERON:0005743!1.85e-20!73;UBERON:0000073!4.11e-20!75;UBERON:0001016!4.11e-20!75;UBERON:0003056!1.76e-19!49;UBERON:0003080!4.05e-18!40;UBERON:0004121!2.32e-17!102;UBERON:0000924!2.32e-17!102;UBERON:0006601!2.32e-17!102;UBERON:0002780!2.51e-17!39;UBERON:0001890!2.51e-17!39;UBERON:0006240!2.51e-17!39;UBERON:0002020!3.68e-17!34;UBERON:0002791!6.39e-16!29;UBERON:0003528!6.39e-16!29;UBERON:0001893!6.39e-16!29;UBERON:0007811!9.89e-13!86;UBERON:0002619!2.26e-11!17;UBERON:0000153!8.82e-11!94;UBERON:0002021!1.06e-10!10;UBERON:0000411!1.06e-10!10;UBERON:0001950!1.06e-10!10;UBERON:0000956!1.77e-10!21;UBERON:0001869!1.77e-10!21;UBERON:0000203!1.77e-10!21;UBERON:0000025!7.07e-08!114;UBERON:0004111!2.56e-07!122;UBERON:0002420!7.58e-07!8;UBERON:0007245!7.58e-07!8;UBERON:0010009!7.58e-07!8;UBERON:0010011!7.58e-07!8;UBERON:0000454!7.58e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.52e-36,10;UBERON:0000411,4.52e-36,10;UBERON:0001950,4.52e-36,10;UBERON:0000073,7.50e-29,54;UBERON:0002616,2.05e-25,46;UBERON:0000955,8.44e-25,47;UBERON:0006238,8.44e-25,47;UBERON:0002619,1.17e-24,17;UBERON:0000956,1.80e-23,21;UBERON:0001869,1.80e-23,21;UBERON:0000203,1.80e-23,21;UBERON:0003080,4.10e-23,40;UBERON:0003528,2.21e-22,29;UBERON:0002791,2.21e-22,29;UBERON:0001893,2.21e-22,29;UBERON:0001049,4.44e-22,52;UBERON:0005068,4.44e-22,52;UBERON:0006241,4.44e-22,52;UBERON:0007135,4.44e-22,52;UBERON:0002780,5.03e-21,39;UBERON:0001890,5.03e-21,39;UBERON:0006240,5.03e-21,39;UBERON:0003056,1.13e-20,49;UBERON:0001017,2.36e-20,73;UBERON:0001016,1.04e-19,75;UBERON:0002346,2.39e-19,64;UBERON:0003075,2.39e-19,64;UBERON:0007284,2.39e-19,64;UBERON:0002020,1.07e-18,34;UBERON:0010371,1.65e-16,73;UBERON:0004121,2.23e-16,95;UBERON:0000924,2.23e-16,95;UBERON:0006601,2.23e-16,95;UBERON:0010314,2.48e-12,92;UBERON:0004684,1.09e-10,3;UBERON:0002275,1.09e-10,3;UBERON:0000025,3.55e-09,114;UBERON:0004111,2.52e-08,122;UBERON:0002950,3.24e-08,4;UBERON:0001891,3.24e-08,4;UBERON:0009616,3.24e-08,4;UBERON:0010286,3.24e-08,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.244981598429908,0.383381884072945,0.919218786610021,2.20231761998777,1.40456071893706,1.53606533256243,0.923204014111357,0.457438218012048,0.52091337055676,0.837548997004143,1.68828783009504,1.83357897332172,0.883885756421003,0.569486723196412,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,7.90508151931177,11.1006754611131,0,0,0,0,1.49790639404823,0.457500602818626,0.376963056338593,4.86708096538374,6.13717097592793,1.66230435647648,1.78465389374533,0,0.124406970610093,0,0,0,0,0.180062129805349,0.60281927134286,0.544291993210623,0.640568601424249,0.187403449119458,1.81092359517311,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0,0,1.68231958851302,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,1.26108115284953,0.221464689648775,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0.963303539926752,0.937693492737625,0,0,0.315508219416257,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0,0,0,0.329098041204242,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0,0,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,3.95326289831947,4.14292712856459,6.30185064783336,2.92150409984269,4.11049511862385,7.55393897389701,2.70009000092722,5.85417564191487,9.5159905886683,4.65984280576638,0.207574695168353,0,0.170733605754134,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p6@Rims1 | |||
}} |
Revision as of 13:22, 5 August 2015
Short description: | p6@Rims1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rims1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -179bp_to_ENSMUST00000097808, NM_001012623, NM_001012624, NM_001012625, NM_053270, NM_183018, uc007als.1, uc007alt.1, uc007alu.1, uc007alv.1, uc007alw.1, uc007aly.1_5end |
EntrezGene: | 116837 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.09e-10 | 3 |