FFCP PHASE1:Mm9::chr2:170557427..170557451,+: Difference between revisions
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{{FFCP|EntrezGene=76829|HGNC=|MCL_coexpression_id=950|UniProt=Q91ZM9,B1AVY6,Q6NXY7|association_with_transcript=120bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end|description=CAGE_peak_3_at_Dok5_5end|id=chr2:170557427..170557451,+|ontology_enrichment_celltype=CL:0000540!6.24e-16!33;CL:0000047!6.24e-16!33;CL:0000031!6.24e-16!33;CL:0000404!6.24e-16!33;CL:0000221!1.78e-15!44;CL:0000133!1.78e-15!44;CL:0002319!1.91e-15!43;CL:0000117!7.17e-15!23;CL:0000337!7.17e-15!23;CL:0000393!3.93e-12!39;CL:0000211!3.93e-12!39;CL:0000055!1.13e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-20,23;CL:0000337,2.15e-20,23;CL:0000540,2.29e-17,33;CL:0000047,2.29e-17,33;CL:0000031,2.29e-17,33;CL:0000404,2.29e-17,33;CL:0002319,3.90e-17,43;CL:0000221,1.82e-16,44;CL:0000133,1.82e-16,44;CL:0000393,4.29e-13,39;CL:0000211,4.29e-13,39;CL:0002609,2.34e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.90e-29!75;UBERON:0001016!7.90e-29!75;UBERON:0001017!2.56e-27!73;UBERON:0005743!2.56e-27!73;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0001049!8.60e-21!52;UBERON:0005068!8.60e-21!52;UBERON:0006241!8.60e-21!52;UBERON:0007135!8.60e-21!52;UBERON:0002346!3.77e-20!71;UBERON:0003075!3.77e-20!71;UBERON:0007284!3.77e-20!71;UBERON:0002020!2.50e-19!34;UBERON:0000033!5.89e-19!63;UBERON:0000955!7.68e-19!50;UBERON:0006238!7.68e-19!50;UBERON:0002616!1.55e-18!49;UBERON:0003080!5.73e-16!40;UBERON:0002791!6.43e-16!29;UBERON:0003528!6.43e-16!29;UBERON:0001893!6.43e-16!29;UBERON:0003056!6.55e-16!49;UBERON:0002780!2.00e-15!39;UBERON:0001890!2.00e-15!39;UBERON:0006240!2.00e-15!39;UBERON:0000956!4.14e-12!21;UBERON:0001869!4.14e-12!21;UBERON:0000203!4.14e-12!21;UBERON:0007811!7.84e-10!86;UBERON:0000153!7.86e-10!94;UBERON:0002619!2.31e-09!17;UBERON:0002021!5.04e-08!10;UBERON:0000411!5.04e-08!10;UBERON:0001950!5.04e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.36e-31,75;UBERON:0001017,3.06e-29,73;UBERON:0002020,2.25e-26,34;UBERON:0000073,4.86e-26,54;UBERON:0001049,1.91e-24,52;UBERON:0005068,1.91e-24,52;UBERON:0006241,1.91e-24,52;UBERON:0007135,1.91e-24,52;UBERON:0004121,8.60e-22,95;UBERON:0000924,8.60e-22,95;UBERON:0006601,8.60e-22,95;UBERON:0003528,1.50e-21,29;UBERON:0002791,1.50e-21,29;UBERON:0001893,1.50e-21,29;UBERON:0000955,1.49e-19,47;UBERON:0006238,1.49e-19,47;UBERON:0002616,3.92e-19,46;UBERON:0002346,7.31e-19,64;UBERON:0003075,7.31e-19,64;UBERON:0007284,7.31e-19,64;UBERON:0003080,2.05e-17,40;UBERON:0002780,1.09e-16,39;UBERON:0001890,1.09e-16,39;UBERON:0006240,1.09e-16,39;UBERON:0010371,2.87e-16,73;UBERON:0000956,3.73e-16,21;UBERON:0001869,3.73e-16,21;UBERON:0000203,3.73e-16,21;UBERON:0002619,2.76e-12,17;UBERON:0003056,4.20e-12,49;UBERON:0010314,1.02e-11,92;UBERON:0002021,1.04e-10,10;UBERON:0000411,1.04e-10,10;UBERON:0001950,1.04e-10,10;UBERON:0003076,1.14e-07,12;UBERON:0003057,1.14e-07,12;UBERON:0002240,9.38e-07,6;UBERON:0005174,9.38e-07,6;UBERON:0001137,9.38e-07,6|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0,0.419959264876088,0,0,0,0,0.771778308107841,0.286533439938757,0,4.65327859977075,3.70293685490423,5.07065122804943,2.03306719241479,0.889294796111139,0.899899717281399,0,2.1314403448383,2.69640099466564,6.91592949578798,12.2353742524004,10.6654691282036,11.1472229516232,5.71301968807607,4.19650227808066,4.77714116938321,4.02550978276593,12.8690630125403,4.40463523997555,3.57524546638526,3.07213066512487,3.29715719325485,4.57438218012048,4.16730696445408,3.62937898701795,1.12552522006336,2.44477196442896,4.71405736757868,5.41012387036591,5.40558392893372,7.19398836665249,4.45872204630035,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,2.77576522825817,0,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,1.94120219936891,0.883366073841574,0.484875253135222,0,1.75668478206928,1.46612694769419,0,0,0,0,3.44518470631092,2.28750301409313,4.27224797183739,3.82413504423008,3.83573185995496,2.0778804455956,3.0825839982874,0.101839363850316,0.870848794270651,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,0.90422890701429,0.95251098811859,0.512454881139399,0.937017245597288,0.517406741478031,0.215567992932842,0,0.703804496655795,1.31517439456545,1.11218899690239,1.74126083261083,0.411564272815887,0,0,0,0,0.621377317606506,0.703578179943289,1.2604344302271,1.18372367792605,0.787056926989615,0.462801338662135,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0,1.89260953707715,4.83651678182637,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.20365132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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76829 | |||
|HGNC= | |||
|MCL_coexpression_id=950 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91ZM9,uniprot:B1AVY6,uniprot:Q6NXY7 | |||
|association_with_transcript=120bp_to_ENSMUST00000029075,NM_001163686,NM_029761,uc008ocg.2,uc012ckm.1_5end | |||
|cluster_id=chr2:170557427..170557451,+ | |||
|description=CAGE_peak_3_at_Dok5_5end | |||
|id=chr2:170557427..170557451,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.24e-16!33;CL:0000047!6.24e-16!33;CL:0000031!6.24e-16!33;CL:0000404!6.24e-16!33;CL:0000221!1.78e-15!44;CL:0000133!1.78e-15!44;CL:0002319!1.91e-15!43;CL:0000117!7.17e-15!23;CL:0000337!7.17e-15!23;CL:0000393!3.93e-12!39;CL:0000211!3.93e-12!39;CL:0000055!1.13e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.15e-20,23;CL:0000337,2.15e-20,23;CL:0000540,2.29e-17,33;CL:0000047,2.29e-17,33;CL:0000031,2.29e-17,33;CL:0000404,2.29e-17,33;CL:0002319,3.90e-17,43;CL:0000221,1.82e-16,44;CL:0000133,1.82e-16,44;CL:0000393,4.29e-13,39;CL:0000211,4.29e-13,39;CL:0002609,2.34e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.90e-29!75;UBERON:0001016!7.90e-29!75;UBERON:0001017!2.56e-27!73;UBERON:0005743!2.56e-27!73;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0001049!8.60e-21!52;UBERON:0005068!8.60e-21!52;UBERON:0006241!8.60e-21!52;UBERON:0007135!8.60e-21!52;UBERON:0002346!3.77e-20!71;UBERON:0003075!3.77e-20!71;UBERON:0007284!3.77e-20!71;UBERON:0002020!2.50e-19!34;UBERON:0000033!5.89e-19!63;UBERON:0000955!7.68e-19!50;UBERON:0006238!7.68e-19!50;UBERON:0002616!1.55e-18!49;UBERON:0003080!5.73e-16!40;UBERON:0002791!6.43e-16!29;UBERON:0003528!6.43e-16!29;UBERON:0001893!6.43e-16!29;UBERON:0003056!6.55e-16!49;UBERON:0002780!2.00e-15!39;UBERON:0001890!2.00e-15!39;UBERON:0006240!2.00e-15!39;UBERON:0000956!4.14e-12!21;UBERON:0001869!4.14e-12!21;UBERON:0000203!4.14e-12!21;UBERON:0007811!7.84e-10!86;UBERON:0000153!7.86e-10!94;UBERON:0002619!2.31e-09!17;UBERON:0002021!5.04e-08!10;UBERON:0000411!5.04e-08!10;UBERON:0001950!5.04e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.36e-31,75;UBERON:0001017,3.06e-29,73;UBERON:0002020,2.25e-26,34;UBERON:0000073,4.86e-26,54;UBERON:0001049,1.91e-24,52;UBERON:0005068,1.91e-24,52;UBERON:0006241,1.91e-24,52;UBERON:0007135,1.91e-24,52;UBERON:0004121,8.60e-22,95;UBERON:0000924,8.60e-22,95;UBERON:0006601,8.60e-22,95;UBERON:0003528,1.50e-21,29;UBERON:0002791,1.50e-21,29;UBERON:0001893,1.50e-21,29;UBERON:0000955,1.49e-19,47;UBERON:0006238,1.49e-19,47;UBERON:0002616,3.92e-19,46;UBERON:0002346,7.31e-19,64;UBERON:0003075,7.31e-19,64;UBERON:0007284,7.31e-19,64;UBERON:0003080,2.05e-17,40;UBERON:0002780,1.09e-16,39;UBERON:0001890,1.09e-16,39;UBERON:0006240,1.09e-16,39;UBERON:0010371,2.87e-16,73;UBERON:0000956,3.73e-16,21;UBERON:0001869,3.73e-16,21;UBERON:0000203,3.73e-16,21;UBERON:0002619,2.76e-12,17;UBERON:0003056,4.20e-12,49;UBERON:0010314,1.02e-11,92;UBERON:0002021,1.04e-10,10;UBERON:0000411,1.04e-10,10;UBERON:0001950,1.04e-10,10;UBERON:0003076,1.14e-07,12;UBERON:0003057,1.14e-07,12;UBERON:0002240,9.38e-07,6;UBERON:0005174,9.38e-07,6;UBERON:0001137,9.38e-07,6 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0,0.419959264876088,0,0,0,0,0.771778308107841,0.286533439938757,0,4.65327859977075,3.70293685490423,5.07065122804943,2.03306719241479,0.889294796111139,0.899899717281399,0,2.1314403448383,2.69640099466564,6.91592949578798,12.2353742524004,10.6654691282036,11.1472229516232,5.71301968807607,4.19650227808066,4.77714116938321,4.02550978276593,12.8690630125403,4.40463523997555,3.57524546638526,3.07213066512487,3.29715719325485,4.57438218012048,4.16730696445408,3.62937898701795,1.12552522006336,2.44477196442896,4.71405736757868,5.41012387036591,5.40558392893372,7.19398836665249,4.45872204630035,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,2.77576522825817,0,0.691846491768175,0.452167921657868,0.352766121407114,0.125666591329675,0,0.289198713839823,0,1.94120219936891,0.883366073841574,0.484875253135222,0,1.75668478206928,1.46612694769419,0,0,0,0,3.44518470631092,2.28750301409313,4.27224797183739,3.82413504423008,3.83573185995496,2.0778804455956,3.0825839982874,0.101839363850316,0.870848794270651,1.0108910337347,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,0.90422890701429,0.95251098811859,0.512454881139399,0.937017245597288,0.517406741478031,0.215567992932842,0,0.703804496655795,1.31517439456545,1.11218899690239,1.74126083261083,0.411564272815887,0,0,0,0,0.621377317606506,0.703578179943289,1.2604344302271,1.18372367792605,0.787056926989615,0.462801338662135,0,0.268273401399619,0.467061369468678,0.329119699826961,0.164167464079095,0.405344047729279,0.877199924551994,0.439100230582101,0,1.89260953707715,4.83651678182637,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0.379335801906163,0.685491075658373,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0,0,0.274561413188081,1.43768206527355,0,0.312037673114561,0,0,0,0,0.189491411770485,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,2.72936002979246,3.16471553798949,0,1.26235463602186,1.57754109708128,0.780877488593277,1.93881057959519,0.955875191810208,0.668396022247182,0.849229592366497,1.61924280669958,1.75353514746787,0.395287777946524,1.60660658210904,0,0.712262414669021,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.517434735131018,1.07168517515796,0.532020700926821,0.891844088010353,0.822745103010605,0.304464949114599,0.23467170806371,0.42366414172764,0,0,0,1.08563264870681,0.119372344003136,0.164140899745061,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0.747582730219894,0.66183396182839,0.583353565032143,1.16243841129958,1.18269287843545,1.05621514781179,0.2604087696879,0,0,0.288030006257865,0,0.405450430580328,0.513554785824136,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,1.36038230169127,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,9.03602948187307,5.52390283808612,8.59343270159095,12.0297227640581,5.48066015816514,5.2877572817279,6.75022500231806,4.05289082901798,3.17199686288943,5.1776031175182,1.03787347584177,1.19707462020309,1.70733605754134,1.21553358534147,1.46729213839588,0.919217542250071,1.33348036680969,2.47242068686673,1.28367683836726,1.76888048234658,2.02783439912192,1.88626341386076,1.87283014939765,2.81710670581425,3.0440798546475,3.33405583898152,3.01299247456624,2.50781986602817,3.29668720642645,2.06078488188156,1.37147700954166,1.59728225543404,3.33810665926249,1.74415699958794,1.78807822789128,1.94613598150856,1.09756783723664,1.05227884575137,2.58027816307137,1.68342681497322,2.25406534435931,2.75812550651578,1.63692417267876,2.16911577660352,1.15743966588685,3.74715866906919,2.33931608445408,0.859484216193193,0.191288332068843,0.441182838239031,2.55054619182464 | |||
|short_description=p3@Dok5 | |||
}} |
Revision as of 15:25, 4 August 2015
Short description: | p3@Dok5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dok5_5end |
Coexpression cluster: | MCL_coexpression_mm9:950 |
Association with transcript: | 120bp_to_ENSMUST00000029075, NM_001163686, NM_029761, uc008ocg.2, uc012ckm.1_5end |
EntrezGene: | 76829 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.15e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.15e-20 | 23 |
neuron | 2.29e-17 | 33 |
neuronal stem cell | 2.29e-17 | 33 |
neuroblast | 2.29e-17 | 33 |
electrically signaling cell | 2.29e-17 | 33 |
neural cell | 3.90e-17 | 43 |
ectodermal cell | 1.82e-16 | 44 |
neurectodermal cell | 1.82e-16 | 44 |
electrically responsive cell | 4.29e-13 | 39 |
electrically active cell | 4.29e-13 | 39 |
neuron of cerebral cortex | 2.34e-07 | 6 |