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FFCP PHASE1:Mm9::chr3:40549357..40549381,+: Difference between revisions

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{{FFCP|EntrezGene=18415|HGNC=|MCL_coexpression_id=0|UniProt=P48722|association_with_transcript=5bp_to_ENSMUST00000077083_5end|description=CAGE_peak_4_at_Hspa4l_5end|id=chr3:40549357..40549381,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!3.00e-14!63;UBERON:0004121!1.03e-13!102;UBERON:0000924!1.03e-13!102;UBERON:0006601!1.03e-13!102;UBERON:0002346!6.78e-13!71;UBERON:0003075!6.78e-13!71;UBERON:0007284!6.78e-13!71;UBERON:0001049!2.12e-11!52;UBERON:0005068!2.12e-11!52;UBERON:0006241!2.12e-11!52;UBERON:0007135!2.12e-11!52;UBERON:0000073!2.15e-11!75;UBERON:0001016!2.15e-11!75;UBERON:0001017!3.41e-11!73;UBERON:0005743!3.41e-11!73;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0003056!5.12e-11!49;UBERON:0002616!1.18e-10!49;UBERON:0000025!5.14e-09!114;UBERON:0004111!8.25e-09!122;UBERON:0000483!2.30e-08!181;UBERON:0003080!3.88e-08!40;UBERON:0002780!1.18e-07!39;UBERON:0001890!1.18e-07!39;UBERON:0006240!1.18e-07!39;UBERON:0000119!1.29e-07!183;UBERON:0007811!1.42e-07!86;UBERON:0002020!1.75e-07!34;UBERON:0002021!2.06e-07!10;UBERON:0000411!2.06e-07!10;UBERON:0001950!2.06e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.51e-22,92;UBERON:0004121,6.31e-17,95;UBERON:0000924,6.31e-17,95;UBERON:0006601,6.31e-17,95;UBERON:0002346,1.11e-16,64;UBERON:0003075,1.11e-16,64;UBERON:0007284,1.11e-16,64;UBERON:0010371,1.17e-16,73;UBERON:0000073,1.89e-14,54;UBERON:0001049,3.89e-13,52;UBERON:0005068,3.89e-13,52;UBERON:0006241,3.89e-13,52;UBERON:0007135,3.89e-13,52;UBERON:0001016,1.12e-12,75;UBERON:0003056,1.14e-12,49;UBERON:0001017,1.97e-12,73;UBERON:0000955,6.60e-11,47;UBERON:0006238,6.60e-11,47;UBERON:0002616,2.36e-10,46;UBERON:0003080,3.41e-09,40;UBERON:0000025,8.71e-09,114;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0002780,1.29e-08,39;UBERON:0001890,1.29e-08,39;UBERON:0006240,1.29e-08,39;UBERON:0004111,2.58e-08,122;UBERON:0002020,4.10e-08,34;UBERON:0000483,8.89e-08,174;UBERON:0000119,2.23e-07,176|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0.90739263392049,0,1.6787927191189,1.16806320297763,0.516493293766305,0.563154888606667,0.234064526321993,0.513653904676515,0.717949430958028,0.171200729931206,0.524522414513984,0.333109761815663,0.607425802169478,0,0,0.137114433605739,0.84877930359606,43.2870346868945,0.695036658406197,0.783599367416806,1.11994695955385,0.91763712426868,1.14846392823004,0.430761996159075,0.430942465371778,1.14014051673824,0.252030129759931,0.221730510655305,0,0,0,2.88851619751275,1.66234645358492,1.22501613757421,0.837063261473815,1.5626706890476,4.71171369576418,1.76469446409304,2.73218193983378,2.91306211818692,0.377690453926732,0.405507724878058,0.367093504323363,0,0.872100625521786,0.439372365468944,0.388859798148567,0.419959264876088,1.43752564364972,0.335565212115473,1.45072428402269,0,1.28629718017973,0.85960031981627,0.515672092277442,1.61853168687678,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.675029691658453,0.420649922702764,2.85650984403804,1.54607978666129,0.61245399607477,0.670918297127655,0,12.1127469099328,12.257984456178,14.5926206593431,0.923204014111357,1.73826522844578,0.52091337055676,6.97957497503452,13.5063026407603,11.6126668310376,5.89257170947335,4.41352210477219,1.86399445825301,1.13589289999776,1.43585964202892,0.869593466105033,1.72084775396277,0.679971333707751,1.07940638327563,0,1.34408066129201,5.05599912474307,0.170430322578058,0,0.35333957451034,1.97180787687353,0,0,0,2.16491041011214,1.77351905832569,3.0331466700887,6.62266502370548,0.258937883647172,1.92974780784272,0.346970653532272,0,0.230615497256059,0.753613202763113,1.05829836422134,1.38233250462643,2.47194967734374,0.722996784599558,0,0.323533699894818,1.10420759230197,0,0,6.14839673724249,4.1889341362691,0.510914110417183,0.718890747035522,0,0.889491589511453,11.6836698735762,11.4375150704657,1.88481528169297,15.8180131374972,14.5757810678288,8.93488591606108,8.76102820565891,0.509196819251581,0.870848794270651,1.0108910337347,2.73574412652416,1.17108398666433,2.5289231487682,1.80062129805349,1.50704817835715,3.06164246180975,2.562274405697,2.90475346135159,6.20888089773638,0,0.945530400839096,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0.199034266818493,0.702213187313235,1.02939162845886,0.852490498186778,1.65700618028402,1.17263029990548,2.16074473753218,2.13070262026689,3.14822770795846,3.08534225774756,2.09280550275367,2.14618721119695,2.10177616260905,3.12663714835613,2.46251196118643,1.62137619091711,2.92399974850665,2.19550115291051,2.14730270016595,10.3042074796422,2.16099685996497,0.330418782983798,1.32225283331772,0.426576501070468,0.464473343720877,0.902072229254653,1.21010114774006,1.55664630691409,1.52180500890047,0.949058123089023,0.658795818896044,1.25667604400135,0.198956472041151,0,0,1.29682829924817,0.199141273254367,0.18966790095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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:18415
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:P48722
|association_with_transcript=5bp_to_ENSMUST00000077083_5end
|cluster_id=chr3:40549357..40549381,+
|description=CAGE_peak_4_at_Hspa4l_5end
|id=chr3:40549357..40549381,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.00e-14!63;UBERON:0004121!1.03e-13!102;UBERON:0000924!1.03e-13!102;UBERON:0006601!1.03e-13!102;UBERON:0002346!6.78e-13!71;UBERON:0003075!6.78e-13!71;UBERON:0007284!6.78e-13!71;UBERON:0001049!2.12e-11!52;UBERON:0005068!2.12e-11!52;UBERON:0006241!2.12e-11!52;UBERON:0007135!2.12e-11!52;UBERON:0000073!2.15e-11!75;UBERON:0001016!2.15e-11!75;UBERON:0001017!3.41e-11!73;UBERON:0005743!3.41e-11!73;UBERON:0000955!3.87e-11!50;UBERON:0006238!3.87e-11!50;UBERON:0003056!5.12e-11!49;UBERON:0002616!1.18e-10!49;UBERON:0000025!5.14e-09!114;UBERON:0004111!8.25e-09!122;UBERON:0000483!2.30e-08!181;UBERON:0003080!3.88e-08!40;UBERON:0002780!1.18e-07!39;UBERON:0001890!1.18e-07!39;UBERON:0006240!1.18e-07!39;UBERON:0000119!1.29e-07!183;UBERON:0007811!1.42e-07!86;UBERON:0002020!1.75e-07!34;UBERON:0002021!2.06e-07!10;UBERON:0000411!2.06e-07!10;UBERON:0001950!2.06e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.51e-22,92;UBERON:0004121,6.31e-17,95;UBERON:0000924,6.31e-17,95;UBERON:0006601,6.31e-17,95;UBERON:0002346,1.11e-16,64;UBERON:0003075,1.11e-16,64;UBERON:0007284,1.11e-16,64;UBERON:0010371,1.17e-16,73;UBERON:0000073,1.89e-14,54;UBERON:0001049,3.89e-13,52;UBERON:0005068,3.89e-13,52;UBERON:0006241,3.89e-13,52;UBERON:0007135,3.89e-13,52;UBERON:0001016,1.12e-12,75;UBERON:0003056,1.14e-12,49;UBERON:0001017,1.97e-12,73;UBERON:0000955,6.60e-11,47;UBERON:0006238,6.60e-11,47;UBERON:0002616,2.36e-10,46;UBERON:0003080,3.41e-09,40;UBERON:0000025,8.71e-09,114;UBERON:0002021,1.03e-08,10;UBERON:0000411,1.03e-08,10;UBERON:0001950,1.03e-08,10;UBERON:0002780,1.29e-08,39;UBERON:0001890,1.29e-08,39;UBERON:0006240,1.29e-08,39;UBERON:0004111,2.58e-08,122;UBERON:0002020,4.10e-08,34;UBERON:0000483,8.89e-08,174;UBERON:0000119,2.23e-07,176
|phase1_expression=1.44133962394315,0.697950815278722,0.454999239389536,0.90739263392049,0,1.6787927191189,1.16806320297763,0.516493293766305,0.563154888606667,0.234064526321993,0.513653904676515,0.717949430958028,0.171200729931206,0.524522414513984,0.333109761815663,0.607425802169478,0,0,0.137114433605739,0.84877930359606,43.2870346868945,0.695036658406197,0.783599367416806,1.11994695955385,0.91763712426868,1.14846392823004,0.430761996159075,0.430942465371778,1.14014051673824,0.252030129759931,0.221730510655305,0,0,0,2.88851619751275,1.66234645358492,1.22501613757421,0.837063261473815,1.5626706890476,4.71171369576418,1.76469446409304,2.73218193983378,2.91306211818692,0.377690453926732,0.405507724878058,0.367093504323363,0,0.872100625521786,0.439372365468944,0.388859798148567,0.419959264876088,1.43752564364972,0.335565212115473,1.45072428402269,0,1.28629718017973,0.85960031981627,0.515672092277442,1.61853168687678,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.675029691658453,0.420649922702764,2.85650984403804,1.54607978666129,0.61245399607477,0.670918297127655,0,12.1127469099328,12.257984456178,14.5926206593431,0.923204014111357,1.73826522844578,0.52091337055676,6.97957497503452,13.5063026407603,11.6126668310376,5.89257170947335,4.41352210477219,1.86399445825301,1.13589289999776,1.43585964202892,0.869593466105033,1.72084775396277,0.679971333707751,1.07940638327563,0,1.34408066129201,5.05599912474307,0.170430322578058,0,0.35333957451034,1.97180787687353,0,0,0,2.16491041011214,1.77351905832569,3.0331466700887,6.62266502370548,0.258937883647172,1.92974780784272,0.346970653532272,0,0.230615497256059,0.753613202763113,1.05829836422134,1.38233250462643,2.47194967734374,0.722996784599558,0,0.323533699894818,1.10420759230197,0,0,6.14839673724249,4.1889341362691,0.510914110417183,0.718890747035522,0,0.889491589511453,11.6836698735762,11.4375150704657,1.88481528169297,15.8180131374972,14.5757810678288,8.93488591606108,8.76102820565891,0.509196819251581,0.870848794270651,1.0108910337347,2.73574412652416,1.17108398666433,2.5289231487682,1.80062129805349,1.50704817835715,3.06164246180975,2.562274405697,2.90475346135159,6.20888089773638,0,0.945530400839096,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0.199034266818493,0.702213187313235,1.02939162845886,0.852490498186778,1.65700618028402,1.17263029990548,2.16074473753218,2.13070262026689,3.14822770795846,3.08534225774756,2.09280550275367,2.14618721119695,2.10177616260905,3.12663714835613,2.46251196118643,1.62137619091711,2.92399974850665,2.19550115291051,2.14730270016595,10.3042074796422,2.16099685996497,0.330418782983798,1.32225283331772,0.426576501070468,0.464473343720877,0.902072229254653,1.21010114774006,1.55664630691409,1.52180500890047,0.949058123089023,0.658795818896044,1.25667604400135,0.198956472041151,0,0,1.29682829924817,0.199141273254367,0.189667900953082,0.228497025219458,0,0.407302655690628,0.387904974335251,0.841629838683823,0.69560190836683,0.590440591918409,0.784993639206874,1.60416313098341,1.48226313543574,0.83422552858047,0.393117990226406,0,0.608580364165509,0.964708639009667,1.01850340712568,0,0.324270453550071,0.823684239564244,1.43768206527355,0,0.936113019343682,1.26289438973556,1.61457672169721,0.482443521363367,1.66277871149944,0.568474235311454,0,0.169745085775188,0.469380496577004,0.502518772325447,1.19021820443007,0.975668239288994,0.472905432318573,0.664394068946325,0.797273843287435,0.983179888294428,1.72684981865896,1.01254341007058,0,0.54390568381871,1.47529281905711,0.275936746304732,12.36239542906,10.6662634798905,0.163934945376675,0.252470927204373,1.26203287766503,1.56175497718655,0.861693590931196,0.716906393857656,1.11399337041197,0.849229592366497,0.809621403349789,1.46127928955656,1.18586333383957,6.42642632843614,0.99358059645788,0.534196811001766,1.46598263418218,1.15479086080775,2.65490276679926,0.728341908464944,0,0.377210159511796,0.885905678642318,0.614870295887855,1.03371317267288,0,0.356497378384721,0.316036757935816,0,0,5.44703369206061,1.26042765821917,0.129358683782755,1.50035924522115,2.12808280370728,1.42695054081656,2.46823530903181,1.522324745573,0.23467170806371,1.48282449604674,0.661585194164886,1.81374878235628,0.968786560175433,0.663442174209714,1.19372344003136,1.80554989719567,1.45740418314925,13.7214723487777,0,0.619160603889667,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,1.5298058699447,0.839708713941948,1.24379976423981,0,0,1.01659733563424,0.648032044930808,0.627264888043406,0.436725127492355,0.404593039154462,0.826534557253359,1.04702376793612,1.42576470620972,0,239.569498940781,0.897099276263873,0.496375471371293,1.55560950675238,0.516639293910924,1.01373675294467,0.117357238645754,1.5624526181274,1.78260885523708,82.3801852016681,137.102282978744,0.948033361884535,0.202725215290164,0.308132871494482,0,0.537080087002444,0.993406773906324,0.961563596159751,0.590758108698309,0.302899349844443,1.5241361331,0.604957110821043,0.974578807397524,1.44317762460494,1.28564592399726,2.72076460338254,0.887943813496259,0.269141569828427,0.167884616364078,0.965947970160952,0.93841237725591,1.09890974560359,0.643105137237198,0.501572104035363,6.21227026878773,5.06357760157895,6.30185064783336,10.3111909406213,16.4419804744954,13.5970901530146,20.2506750069542,20.7147753483141,19.4851235863208,12.9440077937955,1.55681021376265,1.99512436700516,0.512200817262403,0.729320151204882,1.04806581313991,0.551530525350042,1.55572709461131,0.824140228955577,0.320919209591815,1.51618327058278,0.760437899670719,0.754505365544305,0.37456602987953,0.704276676453562,0.746661096422973,1.90517476513229,0.463537303779422,2.12200142510076,0,0.441596760403192,0.685738504770831,1.06485483695602,0.715308569841963,0.581385666529314,1.97629698872194,0.592302255241736,0.548783918618318,1.05227884575137,1.62964936615034,1.12228454331548,0.711810108745045,1.18205378850676,0.818462086339379,1.39443157067369,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p4@Hspa4l
}}

Revision as of 10:31, 6 August 2015

Short description:p4@Hspa4l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Hspa4l_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 5bp_to_ENSMUST00000077083_5end
EntrezGene:18415
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Hspa4l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A411.68
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D22.15
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A310.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C913.72
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5239.57
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H382.38
testis, neonate N30.CNhs11130.1391-42E2137.10
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A416.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest5.51e-2292
ectoderm-derived structure6.31e-1795
ectoderm6.31e-1795
presumptive ectoderm6.31e-1795
neurectoderm1.11e-1664
neural plate1.11e-1664
presumptive neural plate1.11e-1664
ecto-epithelium1.17e-1673
regional part of nervous system1.89e-1454
neural tube3.89e-1352
neural rod3.89e-1352
future spinal cord3.89e-1352
neural keel3.89e-1352
nervous system1.12e-1275
pre-chordal neural plate1.14e-1249
central nervous system1.97e-1273
brain6.60e-1147
future brain6.60e-1147
regional part of brain2.36e-1046
anterior neural tube3.41e-0940
tube8.71e-09114
occipital lobe1.03e-0810
visual cortex1.03e-0810
neocortex1.03e-0810
regional part of forebrain1.29e-0839
forebrain1.29e-0839
future forebrain1.29e-0839
anatomical conduit2.58e-08122
gray matter4.10e-0834
epithelium8.89e-08174
cell layer2.23e-07176
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