FFCP PHASE1:Mm9::chr8:121868390..121868436,+: Difference between revisions
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{{FFCP|EntrezGene=68196|HGNC=|MCL_coexpression_id=60|UniProt=Q9CQZ1|association_with_transcript=-1bp_to_ENSMUST00000034300,NM_024219,uc009npm.1_5end|description=CAGE_peak_1_at_Hsbp1_5end|id=chr8:121868390..121868436,+|ontology_enrichment_celltype=CL:0000055!1.27e-12!50;CL:0000221!1.30e-10!44;CL:0000133!1.30e-10!44;CL:0002319!2.82e-10!43;CL:0000393!4.49e-10!39;CL:0000211!4.49e-10!39;CL:0000117!4.47e-09!23;CL:0000337!4.47e-09!23;CL:0000540!4.86e-08!33;CL:0000047!4.86e-08!33;CL:0000031!4.86e-08!33;CL:0000404!4.86e-08!33;CL:0002321!5.82e-07!70;CL:0000220!5.82e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.30e-10,44;CL:0000133,1.30e-10,44;CL:0002319,2.82e-10,43;CL:0000393,4.49e-10,39;CL:0000211,4.49e-10,39;CL:0000117,4.47e-09,23;CL:0000337,4.47e-09,23;CL:0000540,4.86e-08,33;CL:0000047,4.86e-08,33;CL:0000031,4.86e-08,33;CL:0000404,4.86e-08,33;CL:0002321,5.82e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.45e-23!75;UBERON:0001016!6.45e-23!75;UBERON:0001017!1.83e-22!73;UBERON:0005743!1.83e-22!73;UBERON:0004121!6.94e-20!102;UBERON:0000924!6.94e-20!102;UBERON:0006601!6.94e-20!102;UBERON:0002346!8.65e-20!71;UBERON:0003075!8.65e-20!71;UBERON:0007284!8.65e-20!71;UBERON:0001049!1.18e-19!52;UBERON:0005068!1.18e-19!52;UBERON:0006241!1.18e-19!52;UBERON:0007135!1.18e-19!52;UBERON:0000033!1.53e-18!63;UBERON:0000955!1.01e-17!50;UBERON:0006238!1.01e-17!50;UBERON:0002616!3.07e-17!49;UBERON:0002020!1.68e-16!34;UBERON:0003056!4.70e-15!49;UBERON:0003080!1.46e-14!40;UBERON:0002780!4.14e-14!39;UBERON:0001890!4.14e-14!39;UBERON:0006240!4.14e-14!39;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0004111!1.65e-12!122;UBERON:0000025!4.29e-12!114;UBERON:0002619!3.10e-09!17;UBERON:0000956!4.63e-09!21;UBERON:0001869!4.63e-09!21;UBERON:0000203!4.63e-09!21;UBERON:0002021!1.81e-07!10;UBERON:0000411!1.81e-07!10;UBERON:0001950!1.81e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.03e-25,92;UBERON:0001016,6.45e-23,75;UBERON:0001017,1.83e-22,73;UBERON:0002346,1.49e-20,64;UBERON:0003075,1.49e-20,64;UBERON:0007284,1.49e-20,64;UBERON:0000073,1.70e-20,54;UBERON:0004121,4.24e-20,95;UBERON:0000924,4.24e-20,95;UBERON:0006601,4.24e-20,95;UBERON:0001049,1.18e-19,52;UBERON:0005068,1.18e-19,52;UBERON:0006241,1.18e-19,52;UBERON:0007135,1.18e-19,52;UBERON:0010371,5.42e-17,73;UBERON:0002020,1.68e-16,34;UBERON:0000955,2.11e-16,47;UBERON:0006238,2.11e-16,47;UBERON:0002616,6.31e-16,46;UBERON:0003056,4.70e-15,49;UBERON:0003080,1.46e-14,40;UBERON:0002780,4.14e-14,39;UBERON:0001890,4.14e-14,39;UBERON:0006240,4.14e-14,39;UBERON:0003528,2.60e-13,29;UBERON:0002791,2.60e-13,29;UBERON:0001893,2.60e-13,29;UBERON:0004111,1.65e-12,122;UBERON:0000025,4.29e-12,114;UBERON:0002619,3.10e-09,17;UBERON:0000956,4.63e-09,21;UBERON:0001869,4.63e-09,21;UBERON:0000203,4.63e-09,21;UBERON:0002021,1.81e-07,10;UBERON:0000411,1.81e-07,10;UBERON:0001950,1.81e-07,10|phase1_expression=236.219549479571,204.848564284305,192.464678261774,121.893077156653,115.706913617606,134.639176073336,142.970936044462,128.090336854044,68.42331896571,66.2402609491241,90.2318692548411,80.0114754723224,125.832536499436,133.490954493809,57.9610985559253,60.540104949558,47.570207712714,106.783942973763,91.4553272150278,99.7315681725371,512.130693289742,106.737772540952,119.107103847355,200.790490605725,205.321306555117,230.841249574238,224.426999998878,203.620314888165,260.902154913601,185.494175503309,227.495503932343,46.9922698360127,38.7490816178279,47.5445043046316,103.408879870956,106.390173029435,105.759726543907,163.227335987394,198.459177509045,181.662739158908,218.822113547537,195.351008698115,220.907210629175,256.451818216251,256.88914371025,247.78811541827,242.541316747892,251.383005306655,359.845967319065,348.807238939264,203.120297778401,173.940602881616,93.4549115741592,87.0434570413613,68.8992288242051,286.329752308009,235.817021069597,299.605485613194,354.053806504296,362.887811780615,257.969381227015,186.364492638023,163.63024248445,213.276232995692,234.361327928373,205.328753219423,299.000910297368,301.995587982742,196.906573773799,193.868527444308,217.476010037329,429.333429558917,508.218512729663,262.865255115291,238.463531893372,168.217037949634,277.49202011846,277.081523644857,274.955694528676,325.231585542658,366.499500271253,336.510037379667,311.28904388654,369.172272180782,304.221311323629,412.480019663135,436.796316691648,363.665318805161,224.679615619557,228.679540883133,137.395767644595,234.035294538937,165.913005424691,222.357714954781,207.928453583254,166.217975113111,263.333287747035,291.606281931057,314.081279564868,280.55162216121,254.785746376015,183.506862702475,203.844191765317,113.770672504533,247.016277793795,240.438512335869,203.726351340958,227.682656159806,192.390847549849,195.646739287439,171.230017518176,187.246269161967,224.850109824657,244.170677695249,194.962076430999,214.512871399756,207.643772896874,266.062816732637,122.076256169083,174.8699647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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68196 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CQZ1 | |||
|association_with_transcript=-1bp_to_ENSMUST00000034300,NM_024219,uc009npm.1_5end | |||
|cluster_id=chr8:121868390..121868436,+ | |||
|description=CAGE_peak_1_at_Hsbp1_5end | |||
|id=chr8:121868390..121868436,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.27e-12!50;CL:0000221!1.30e-10!44;CL:0000133!1.30e-10!44;CL:0002319!2.82e-10!43;CL:0000393!4.49e-10!39;CL:0000211!4.49e-10!39;CL:0000117!4.47e-09!23;CL:0000337!4.47e-09!23;CL:0000540!4.86e-08!33;CL:0000047!4.86e-08!33;CL:0000031!4.86e-08!33;CL:0000404!4.86e-08!33;CL:0002321!5.82e-07!70;CL:0000220!5.82e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.30e-10,44;CL:0000133,1.30e-10,44;CL:0002319,2.82e-10,43;CL:0000393,4.49e-10,39;CL:0000211,4.49e-10,39;CL:0000117,4.47e-09,23;CL:0000337,4.47e-09,23;CL:0000540,4.86e-08,33;CL:0000047,4.86e-08,33;CL:0000031,4.86e-08,33;CL:0000404,4.86e-08,33;CL:0002321,5.82e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.45e-23!75;UBERON:0001016!6.45e-23!75;UBERON:0001017!1.83e-22!73;UBERON:0005743!1.83e-22!73;UBERON:0004121!6.94e-20!102;UBERON:0000924!6.94e-20!102;UBERON:0006601!6.94e-20!102;UBERON:0002346!8.65e-20!71;UBERON:0003075!8.65e-20!71;UBERON:0007284!8.65e-20!71;UBERON:0001049!1.18e-19!52;UBERON:0005068!1.18e-19!52;UBERON:0006241!1.18e-19!52;UBERON:0007135!1.18e-19!52;UBERON:0000033!1.53e-18!63;UBERON:0000955!1.01e-17!50;UBERON:0006238!1.01e-17!50;UBERON:0002616!3.07e-17!49;UBERON:0002020!1.68e-16!34;UBERON:0003056!4.70e-15!49;UBERON:0003080!1.46e-14!40;UBERON:0002780!4.14e-14!39;UBERON:0001890!4.14e-14!39;UBERON:0006240!4.14e-14!39;UBERON:0002791!2.60e-13!29;UBERON:0003528!2.60e-13!29;UBERON:0001893!2.60e-13!29;UBERON:0004111!1.65e-12!122;UBERON:0000025!4.29e-12!114;UBERON:0002619!3.10e-09!17;UBERON:0000956!4.63e-09!21;UBERON:0001869!4.63e-09!21;UBERON:0000203!4.63e-09!21;UBERON:0002021!1.81e-07!10;UBERON:0000411!1.81e-07!10;UBERON:0001950!1.81e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.03e-25,92;UBERON:0001016,6.45e-23,75;UBERON:0001017,1.83e-22,73;UBERON:0002346,1.49e-20,64;UBERON:0003075,1.49e-20,64;UBERON:0007284,1.49e-20,64;UBERON:0000073,1.70e-20,54;UBERON:0004121,4.24e-20,95;UBERON:0000924,4.24e-20,95;UBERON:0006601,4.24e-20,95;UBERON:0001049,1.18e-19,52;UBERON:0005068,1.18e-19,52;UBERON:0006241,1.18e-19,52;UBERON:0007135,1.18e-19,52;UBERON:0010371,5.42e-17,73;UBERON:0002020,1.68e-16,34;UBERON:0000955,2.11e-16,47;UBERON:0006238,2.11e-16,47;UBERON:0002616,6.31e-16,46;UBERON:0003056,4.70e-15,49;UBERON:0003080,1.46e-14,40;UBERON:0002780,4.14e-14,39;UBERON:0001890,4.14e-14,39;UBERON:0006240,4.14e-14,39;UBERON:0003528,2.60e-13,29;UBERON:0002791,2.60e-13,29;UBERON:0001893,2.60e-13,29;UBERON:0004111,1.65e-12,122;UBERON:0000025,4.29e-12,114;UBERON:0002619,3.10e-09,17;UBERON:0000956,4.63e-09,21;UBERON:0001869,4.63e-09,21;UBERON:0000203,4.63e-09,21;UBERON:0002021,1.81e-07,10;UBERON:0000411,1.81e-07,10;UBERON:0001950,1.81e-07,10 | |||
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| |||
|short_description=p1@Hsbp1 | |||
}} |
Revision as of 00:35, 6 August 2015
Short description: | p1@Hsbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hsbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | -1bp_to_ENSMUST00000034300, NM_024219, uc009npm.1_5end |
EntrezGene: | 68196 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.30e-10 | 44 |
neurectodermal cell | 1.30e-10 | 44 |
neural cell | 2.82e-10 | 43 |
electrically responsive cell | 4.49e-10 | 39 |
electrically active cell | 4.49e-10 | 39 |
CNS neuron (sensu Vertebrata) | 4.47e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.47e-09 | 23 |
neuron | 4.86e-08 | 33 |
neuronal stem cell | 4.86e-08 | 33 |
neuroblast | 4.86e-08 | 33 |
electrically signaling cell | 4.86e-08 | 33 |
embryonic cell | 5.82e-07 | 70 |