FFCP PHASE1:Mm9::chrX:133372559..133372564,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=212|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133372559..133372564,+|id=chrX:133372559..133372564,+|ontology_enrichment_celltype=CL:0000540!4.24e-12!33;CL:0000047!4.24e-12!33;CL:0000031!4.24e-12!33;CL:0000404!4.24e-12!33;CL:0002319!4.26e-11!43;CL:0000221!9.41e-11!44;CL:0000133!9.41e-11!44;CL:0000393!1.08e-09!39;CL:0000211!1.08e-09!39;CL:0000055!5.53e-09!50;CL:0002614!2.53e-08!3;CL:0002610!2.97e-08!3;CL:0000107!6.22e-08!9;CL:0000117!9.14e-07!23;CL:0000337!9.14e-07!23|ontology_enrichment_celltype_v019_2=CL:0002614,4.63e-20,3;CL:0002610,7.19e-20,3;CL:0000117,4.40e-13,23;CL:0000337,4.40e-13,23;CL:0000540,6.00e-09,33;CL:0000047,6.00e-09,33;CL:0000031,6.00e-09,33;CL:0000404,6.00e-09,33;CL:0000393,1.77e-07,39;CL:0000211,1.77e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.97e-28!75;UBERON:0001016!5.97e-28!75;UBERON:0001017!3.14e-25!73;UBERON:0005743!3.14e-25!73;UBERON:0004121!5.88e-20!102;UBERON:0000924!5.88e-20!102;UBERON:0006601!5.88e-20!102;UBERON:0002616!5.02e-18!49;UBERON:0001049!5.46e-18!52;UBERON:0005068!5.46e-18!52;UBERON:0006241!5.46e-18!52;UBERON:0007135!5.46e-18!52;UBERON:0000955!1.49e-17!50;UBERON:0006238!1.49e-17!50;UBERON:0002346!1.04e-15!71;UBERON:0003075!1.04e-15!71;UBERON:0007284!1.04e-15!71;UBERON:0000033!3.10e-14!63;UBERON:0002021!3.67e-14!10;UBERON:0000411!3.67e-14!10;UBERON:0001950!3.67e-14!10;UBERON:0002298!4.50e-14!6;UBERON:0002020!1.04e-13!34;UBERON:0003080!2.63e-11!40;UBERON:0000010!5.94e-11!11;UBERON:0002791!6.40e-11!29;UBERON:0003528!6.40e-11!29;UBERON:0001893!6.40e-11!29;UBERON:0002950!3.25e-10!4;UBERON:0001891!3.25e-10!4;UBERON:0009616!3.25e-10!4;UBERON:0002780!3.88e-10!39;UBERON:0001890!3.88e-10!39;UBERON:0006240!3.88e-10!39;UBERON:0003056!8.16e-10!49;UBERON:0002619!1.47e-09!17;UBERON:0000956!4.45e-09!21;UBERON:0001869!4.45e-09!21;UBERON:0000203!4.45e-09!21;UBERON:0007811!6.45e-09!86;UBERON:0002038!2.53e-08!3;UBERON:0002308!2.53e-08!3;UBERON:0009663!2.53e-08!3;UBERON:0009661!2.53e-08!3;UBERON:0006331!2.53e-08!3;UBERON:0000125!2.53e-08!3;UBERON:0004684!2.97e-08!3;UBERON:0002275!2.97e-08!3;UBERON:0003076!5.11e-08!12;UBERON:0003057!5.11e-08!12;UBERON:0002410!6.22e-08!9;UBERON:0000153!1.08e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.63e-20,3;UBERON:0009663,4.63e-20,3;UBERON:0009661,4.63e-20,3;UBERON:0000125,4.63e-20,3;UBERON:0002308,4.63e-20,3;UBERON:0004684,7.19e-20,3;UBERON:0002275,7.19e-20,3;UBERON:0000073,1.99e-18,54;UBERON:0001017,1.24e-15,73;UBERON:0002950,3.31e-15,4;UBERON:0001891,3.31e-15,4;UBERON:0009616,3.31e-15,4;UBERON:0010286,3.31e-15,4;UBERON:0001016,3.51e-15,75;UBERON:0001049,1.79e-13,52;UBERON:0005068,1.79e-13,52;UBERON:0006241,1.79e-13,52;UBERON:0007135,1.79e-13,52;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002020,3.54e-11,34;UBERON:0002346,1.03e-10,64;UBERON:0003075,1.03e-10,64;UBERON:0007284,1.03e-10,64;UBERON:0002021,2.34e-10,10;UBERON:0000411,2.34e-10,10;UBERON:0001950,2.34e-10,10;UBERON:0003528,3.01e-10,29;UBERON:0002791,3.01e-10,29;UBERON:0001893,3.01e-10,29;UBERON:0002616,3.34e-10,46;UBERON:0000955,5.78e-10,47;UBERON:0006238,5.78e-10,47;UBERON:0002780,1.11e-09,39;UBERON:0001890,1.11e-09,39;UBERON:0006240,1.11e-09,39;UBERON:0003080,2.03e-09,40;UBERON:0010371,3.11e-09,73;UBERON:0002420,7.10e-08,8;UBERON:0007245,7.10e-08,8;UBERON:0010009,7.10e-08,8;UBERON:0010011,7.10e-08,8;UBERON:0000454,7.10e-08,8;UBERON:0003056,1.54e-07,49;UBERON:0010314,4.76e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,2.20231761998777,2.042997409363,3.5329502648936,0,0,0,1.95428099300967,3.37657566019008,3.81995619442025,1.17851434189467,0.142371680799103,0,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0,0,0.347648640384553,0.511430914660661,0.62336413367868,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.28932855251423,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0,0.849229592366497,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,4.58316410751517,1.54667864109319,0.685082519770642,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:133372559..133372564,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:133372559..133372564,+ | |||
|description=CAGE_peak_at_chrX:133372559..133372564,+ | |||
|id=chrX:133372559..133372564,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.24e-12!33;CL:0000047!4.24e-12!33;CL:0000031!4.24e-12!33;CL:0000404!4.24e-12!33;CL:0002319!4.26e-11!43;CL:0000221!9.41e-11!44;CL:0000133!9.41e-11!44;CL:0000393!1.08e-09!39;CL:0000211!1.08e-09!39;CL:0000055!5.53e-09!50;CL:0002614!2.53e-08!3;CL:0002610!2.97e-08!3;CL:0000107!6.22e-08!9;CL:0000117!9.14e-07!23;CL:0000337!9.14e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,4.63e-20,3;CL:0002610,7.19e-20,3;CL:0000117,4.40e-13,23;CL:0000337,4.40e-13,23;CL:0000540,6.00e-09,33;CL:0000047,6.00e-09,33;CL:0000031,6.00e-09,33;CL:0000404,6.00e-09,33;CL:0000393,1.77e-07,39;CL:0000211,1.77e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.97e-28!75;UBERON:0001016!5.97e-28!75;UBERON:0001017!3.14e-25!73;UBERON:0005743!3.14e-25!73;UBERON:0004121!5.88e-20!102;UBERON:0000924!5.88e-20!102;UBERON:0006601!5.88e-20!102;UBERON:0002616!5.02e-18!49;UBERON:0001049!5.46e-18!52;UBERON:0005068!5.46e-18!52;UBERON:0006241!5.46e-18!52;UBERON:0007135!5.46e-18!52;UBERON:0000955!1.49e-17!50;UBERON:0006238!1.49e-17!50;UBERON:0002346!1.04e-15!71;UBERON:0003075!1.04e-15!71;UBERON:0007284!1.04e-15!71;UBERON:0000033!3.10e-14!63;UBERON:0002021!3.67e-14!10;UBERON:0000411!3.67e-14!10;UBERON:0001950!3.67e-14!10;UBERON:0002298!4.50e-14!6;UBERON:0002020!1.04e-13!34;UBERON:0003080!2.63e-11!40;UBERON:0000010!5.94e-11!11;UBERON:0002791!6.40e-11!29;UBERON:0003528!6.40e-11!29;UBERON:0001893!6.40e-11!29;UBERON:0002950!3.25e-10!4;UBERON:0001891!3.25e-10!4;UBERON:0009616!3.25e-10!4;UBERON:0002780!3.88e-10!39;UBERON:0001890!3.88e-10!39;UBERON:0006240!3.88e-10!39;UBERON:0003056!8.16e-10!49;UBERON:0002619!1.47e-09!17;UBERON:0000956!4.45e-09!21;UBERON:0001869!4.45e-09!21;UBERON:0000203!4.45e-09!21;UBERON:0007811!6.45e-09!86;UBERON:0002038!2.53e-08!3;UBERON:0002308!2.53e-08!3;UBERON:0009663!2.53e-08!3;UBERON:0009661!2.53e-08!3;UBERON:0006331!2.53e-08!3;UBERON:0000125!2.53e-08!3;UBERON:0004684!2.97e-08!3;UBERON:0002275!2.97e-08!3;UBERON:0003076!5.11e-08!12;UBERON:0003057!5.11e-08!12;UBERON:0002410!6.22e-08!9;UBERON:0000153!1.08e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.63e-20,3;UBERON:0009663,4.63e-20,3;UBERON:0009661,4.63e-20,3;UBERON:0000125,4.63e-20,3;UBERON:0002308,4.63e-20,3;UBERON:0004684,7.19e-20,3;UBERON:0002275,7.19e-20,3;UBERON:0000073,1.99e-18,54;UBERON:0001017,1.24e-15,73;UBERON:0002950,3.31e-15,4;UBERON:0001891,3.31e-15,4;UBERON:0009616,3.31e-15,4;UBERON:0010286,3.31e-15,4;UBERON:0001016,3.51e-15,75;UBERON:0001049,1.79e-13,52;UBERON:0005068,1.79e-13,52;UBERON:0006241,1.79e-13,52;UBERON:0007135,1.79e-13,52;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0002020,3.54e-11,34;UBERON:0002346,1.03e-10,64;UBERON:0003075,1.03e-10,64;UBERON:0007284,1.03e-10,64;UBERON:0002021,2.34e-10,10;UBERON:0000411,2.34e-10,10;UBERON:0001950,2.34e-10,10;UBERON:0003528,3.01e-10,29;UBERON:0002791,3.01e-10,29;UBERON:0001893,3.01e-10,29;UBERON:0002616,3.34e-10,46;UBERON:0000955,5.78e-10,47;UBERON:0006238,5.78e-10,47;UBERON:0002780,1.11e-09,39;UBERON:0001890,1.11e-09,39;UBERON:0006240,1.11e-09,39;UBERON:0003080,2.03e-09,40;UBERON:0010371,3.11e-09,73;UBERON:0002420,7.10e-08,8;UBERON:0007245,7.10e-08,8;UBERON:0010009,7.10e-08,8;UBERON:0010011,7.10e-08,8;UBERON:0000454,7.10e-08,8;UBERON:0003056,1.54e-07,49;UBERON:0010314,4.76e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,2.20231761998777,2.042997409363,3.5329502648936,0,0,0,1.95428099300967,3.37657566019008,3.81995619442025,1.17851434189467,0.142371680799103,0,0.151452386666368,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0,0,0.347648640384553,0.511430914660661,0.62336413367868,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,1.28932855251423,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0,0.849229592366497,0.404810701674894,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,4.58316410751517,1.54667864109319,0.685082519770642,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:133372559..133372564,+ | |||
}} |
Latest revision as of 00:37, 6 August 2015
Short description: | p@chrX:133372559..133372564, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133372559..133372564, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 4.63e-20 | 3 |
raphe nuclei neuron | 7.19e-20 | 3 |
CNS neuron (sensu Vertebrata) | 4.40e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.40e-13 | 23 |
neuron | 6.00e-09 | 33 |
neuronal stem cell | 6.00e-09 | 33 |
neuroblast | 6.00e-09 | 33 |
electrically signaling cell | 6.00e-09 | 33 |
electrically responsive cell | 1.77e-07 | 39 |
electrically active cell | 1.77e-07 | 39 |