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FFCP PHASE1:Mm9::chr2:66248140..66248191,-: Difference between revisions

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|id=chr2:66248140..66248191,-
|id=chr2:66248140..66248191,-
|ontology_enrichment_celltype=CL:0000117!2.65e-12!23;CL:0000337!2.65e-12!23;CL:0000540!3.80e-11!33;CL:0000047!3.80e-11!33;CL:0000031!3.80e-11!33;CL:0000404!3.80e-11!33;CL:0000221!3.40e-08!44;CL:0000133!3.40e-08!44;CL:0002319!4.74e-08!43;CL:0000393!1.96e-07!39;CL:0000211!1.96e-07!39
|ontology_enrichment_celltype=CL:0000117!2.65e-12!23;CL:0000337!2.65e-12!23;CL:0000540!3.80e-11!33;CL:0000047!3.80e-11!33;CL:0000031!3.80e-11!33;CL:0000404!3.80e-11!33;CL:0000221!3.40e-08!44;CL:0000133!3.40e-08!44;CL:0002319!4.74e-08!43;CL:0000393!1.96e-07!39;CL:0000211!1.96e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.76e-16,23;CL:0000337,3.76e-16,23;CL:0000540,9.13e-11,33;CL:0000047,9.13e-11,33;CL:0000031,9.13e-11,33;CL:0000404,9.13e-11,33;CL:0000393,5.39e-08,39;CL:0000211,5.39e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.57e-25!71;UBERON:0003075!3.57e-25!71;UBERON:0007284!3.57e-25!71;UBERON:0000073!1.21e-24!75;UBERON:0001016!1.21e-24!75;UBERON:0001017!1.84e-24!73;UBERON:0005743!1.84e-24!73;UBERON:0000033!7.07e-24!63;UBERON:0004121!1.73e-23!102;UBERON:0000924!1.73e-23!102;UBERON:0006601!1.73e-23!102;UBERON:0001049!2.69e-22!52;UBERON:0005068!2.69e-22!52;UBERON:0006241!2.69e-22!52;UBERON:0007135!2.69e-22!52;UBERON:0000955!3.55e-21!50;UBERON:0006238!3.55e-21!50;UBERON:0002616!1.63e-20!49;UBERON:0003056!3.10e-20!49;UBERON:0002020!1.67e-17!34;UBERON:0000153!2.29e-17!94;UBERON:0003080!3.56e-17!40;UBERON:0002780!1.95e-16!39;UBERON:0001890!1.95e-16!39;UBERON:0006240!1.95e-16!39;UBERON:0007811!2.98e-16!86;UBERON:0002791!1.47e-14!29;UBERON:0003528!1.47e-14!29;UBERON:0001893!1.47e-14!29;UBERON:0000956!5.43e-10!21;UBERON:0001869!5.43e-10!21;UBERON:0000203!5.43e-10!21;UBERON:0002021!2.88e-08!10;UBERON:0000411!2.88e-08!10;UBERON:0001950!2.88e-08!10;UBERON:0002619!3.11e-08!17
|ontology_enrichment_uberon=UBERON:0002346!3.57e-25!71;UBERON:0003075!3.57e-25!71;UBERON:0007284!3.57e-25!71;UBERON:0000073!1.21e-24!75;UBERON:0001016!1.21e-24!75;UBERON:0001017!1.84e-24!73;UBERON:0005743!1.84e-24!73;UBERON:0000033!7.07e-24!63;UBERON:0004121!1.73e-23!102;UBERON:0000924!1.73e-23!102;UBERON:0006601!1.73e-23!102;UBERON:0001049!2.69e-22!52;UBERON:0005068!2.69e-22!52;UBERON:0006241!2.69e-22!52;UBERON:0007135!2.69e-22!52;UBERON:0000955!3.55e-21!50;UBERON:0006238!3.55e-21!50;UBERON:0002616!1.63e-20!49;UBERON:0003056!3.10e-20!49;UBERON:0002020!1.67e-17!34;UBERON:0000153!2.29e-17!94;UBERON:0003080!3.56e-17!40;UBERON:0002780!1.95e-16!39;UBERON:0001890!1.95e-16!39;UBERON:0006240!1.95e-16!39;UBERON:0007811!2.98e-16!86;UBERON:0002791!1.47e-14!29;UBERON:0003528!1.47e-14!29;UBERON:0001893!1.47e-14!29;UBERON:0000956!5.43e-10!21;UBERON:0001869!5.43e-10!21;UBERON:0000203!5.43e-10!21;UBERON:0002021!2.88e-08!10;UBERON:0000411!2.88e-08!10;UBERON:0001950!2.88e-08!10;UBERON:0002619!3.11e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-34,54;UBERON:0002346,3.41e-33,64;UBERON:0003075,3.41e-33,64;UBERON:0007284,3.41e-33,64;UBERON:0001049,5.79e-32,52;UBERON:0005068,5.79e-32,52;UBERON:0006241,5.79e-32,52;UBERON:0007135,5.79e-32,52;UBERON:0001017,3.71e-28,73;UBERON:0010371,7.00e-28,73;UBERON:0000955,3.00e-27,47;UBERON:0006238,3.00e-27,47;UBERON:0001016,6.67e-27,75;UBERON:0002616,2.65e-26,46;UBERON:0003056,5.88e-26,49;UBERON:0002020,1.12e-25,34;UBERON:0004121,3.44e-24,95;UBERON:0000924,3.44e-24,95;UBERON:0006601,3.44e-24,95;UBERON:0003080,1.17e-23,40;UBERON:0002780,1.37e-22,39;UBERON:0001890,1.37e-22,39;UBERON:0006240,1.37e-22,39;UBERON:0003528,2.33e-21,29;UBERON:0002791,2.33e-21,29;UBERON:0001893,2.33e-21,29;UBERON:0010314,2.51e-18,92;UBERON:0000956,1.17e-14,21;UBERON:0001869,1.17e-14,21;UBERON:0000203,1.17e-14,21;UBERON:0002619,4.28e-12,17;UBERON:0002021,2.55e-11,10;UBERON:0000411,2.55e-11,10;UBERON:0001950,2.55e-11,10;UBERON:0003076,1.43e-08,12;UBERON:0003057,1.43e-08,12;UBERON:0002420,6.60e-08,8;UBERON:0007245,6.60e-08,8;UBERON:0010009,6.60e-08,8;UBERON:0010011,6.60e-08,8;UBERON:0000454,6.60e-08,8
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,11.1406710097901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,2.90330914463737,2.56511282830212,1.89292465216244,6.56997264128748,6.62605622854841,3.06226998037385,2.68367318851062,1.83843757322004,46.2486700197433,52.8625579672677,47.925238375948,2.90149833006426,3.11057988248193,5.73004707612436,27.9182999001381,25.8870800614573,29.795658316478,14.4368006882097,16.5151149726959,8.38797506213853,0.37863096666592,0.68014404096107,0,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0.445326417194474,0.346970653532272,0,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,72.3168568618521,68.0701797143729,0,0,0,0,63.5112311076448,60.8475801748773,8.41884159156192,54.5808365403748,71.3446125951622,59.0118046549151,42.831693449888,0.611036183101898,0.497627882440372,0.505445516867349,2.73574412652416,1.56144531555244,0.919608417733892,1.0803727788321,0.753524089178575,1.97305847538851,3.20284300712124,2.24884138943349,9.31332134660456,0,1.32374256117473,2.28736461413134,1.09597866213787,0.834141747676794,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.134206418760372,42.899149507082,5.45394445610208,0,0,0.213288250535234,0.928946687441754,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.581857461502877,0.280543279561274,0.316182685621286,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3486879140425,64.4664276257117,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0.790575555893047,40.4864858691477,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.98067203434441,0.258717367565509,1.92903331528433,1.59606210278046,2.31879462882692,1.64549020602121,0.913394847343798,0,0,0.441056796109924,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,89.3749955690657,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,1.10717597753397,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,1.58005560314089,0.810900861160657,0.410843828659309,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.194915761479505,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0.501572104035363,45.7448992519824,52.016751725311,42.9671635079547,40.9010573977977,57.546931660734,63.4530873807348,56.7018900194717,63.4952896546151,69.3307885745833,48.1517089929193,0.518936737920883,2.79317411380722,1.70733605754134,1.45864030240976,0.419226325255965,0.735374033800057,2.22246727801615,0.412070114477788,1.92551525755089,2.52697211763797,1.77435509923168,2.07488975524684,3.183811253976,3.20125762024346,2.87177344778066,0.952587382566147,1.62238056322798,2.70072908649187,2.06042950401653,2.94397840268795,2.40008476669791,3.01708870470874,2.86123427936785,2.90692833264657,3.10560955370591,1.69229215783353,2.74391959309159,3.6829759601298,3.66671107383827,2.24456908663095,2.37270036248348,2.26560309463796,2.86461730218783,2.01417893541756,2.50778594275484,2.49810577937946,2.57324769289949,1.50409737833809,1.53030665655075,0.441182838239031,0.927471342481686
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,11.1406710097901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,2.90330914463737,2.56511282830212,1.89292465216244,6.56997264128748,6.62605622854841,3.06226998037385,2.68367318851062,1.83843757322004,46.2486700197433,52.8625579672677,47.925238375948,2.90149833006426,3.11057988248193,5.73004707612436,27.9182999001381,25.8870800614573,29.795658316478,14.4368006882097,16.5151149726959,8.38797506213853,0.37863096666592,0.68014404096107,0,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0.445326417194474,0.346970653532272,0,0.461230994512117,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,0.970601099684455,0.441683036920787,0.969750506270444,0,72.3168568618521,68.0701797143729,0,0,0,0,63.5112311076448,60.8475801748773,8.41884159156192,54.5808365403748,71.3446125951622,59.0118046549151,42.831693449888,0.611036183101898,0.497627882440372,0.505445516867349,2.73574412652416,1.56144531555244,0.919608417733892,1.0803727788321,0.753524089178575,1.97305847538851,3.20284300712124,2.24884138943349,9.31332134660456,0,1.32374256117473,2.28736461413134,1.09597866213787,0.834141747676794,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0,0,0.268273401399619,0,0.16455984991348,0,0,0,0,0.134206418760372,42.899149507082,5.45394445610208,0,0,0.213288250535234,0.928946687441754,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0.581857461502877,0.280543279561274,0.316182685621286,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.3486879140425,64.4664276257117,0,0,0.631016438832513,0.780877488593277,1.29254038639679,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0.790575555893047,40.4864858691477,0.141940085208269,0.178065603667255,0,0.659880491890142,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,1.98067203434441,0.258717367565509,1.92903331528433,1.59606210278046,2.31879462882692,1.64549020602121,0.913394847343798,0,0,0.441056796109924,0.16488625294148,0,0.0603129249281559,0,0.164140899745061,0,89.3749955690657,0,0,0,0,0,0,0.169978429993855,0,0,0.954670618015114,1.10717597753397,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,1.58005560314089,0.810900861160657,0.410843828659309,0.129920822977795,0.179026695667481,0.39736270956253,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0.194915761479505,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0.501572104035363,45.7448992519824,52.016751725311,42.9671635079547,40.9010573977977,57.546931660734,63.4530873807348,56.7018900194717,63.4952896546151,69.3307885745833,48.1517089929193,0.518936737920883,2.79317411380722,1.70733605754134,1.45864030240976,0.419226325255965,0.735374033800057,2.22246727801615,0.412070114477788,1.92551525755089,2.52697211763797,1.77435509923168,2.07488975524684,3.183811253976,3.20125762024346,2.87177344778066,0.952587382566147,1.62238056322798,2.70072908649187,2.06042950401653,2.94397840268795,2.40008476669791,3.01708870470874,2.86123427936785,2.90692833264657,3.10560955370591,1.69229215783353,2.74391959309159,3.6829759601298,3.66671107383827,2.24456908663095,2.37270036248348,2.26560309463796,2.86461730218783,2.01417893541756,2.50778594275484,2.49810577937946,2.57324769289949,1.50409737833809,1.53030665655075,0.441182838239031,0.927471342481686
|short_description=p1@Scn1a
|short_description=p1@Scn1a
}}
}}

Revision as of 07:08, 14 November 2012

Short description:p1@Scn1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scn1a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -19bp_to_ENSMUST00000112366_5end
EntrezGene:Scn1a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scn1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F352.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D747.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.92
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.89
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B272.32
cerebellum, neonate N30.CNhs11135.1395-42I268.07
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A463.51
corpus striatum, adult.CNhs10487.19-21D860.85
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D554.58
cortex, neonate N30.CNhs11107.1392-42F271.34
diencephalon, adult.CNhs10482.20-12F259.01
diencephalon, neonate N30.CNhs11201.1388-42B242.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E842.90
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C278.35
medulla oblongata, neonate N30.CNhs11200.1396-42A364.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I940.49
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C989.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A252.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D740.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A457.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A563.45
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A763.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A869.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A948.15
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.76e-1623
neuroblast (sensu Vertebrata)3.76e-1623
neuron9.13e-1133
neuronal stem cell9.13e-1133
neuroblast9.13e-1133
electrically signaling cell9.13e-1133
electrically responsive cell5.39e-0839
electrically active cell5.39e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.25e-3454
neurectoderm3.41e-3364
neural plate3.41e-3364
presumptive neural plate3.41e-3364
neural tube5.79e-3252
neural rod5.79e-3252
future spinal cord5.79e-3252
neural keel5.79e-3252
central nervous system3.71e-2873
ecto-epithelium7.00e-2873
brain3.00e-2747
future brain3.00e-2747
nervous system6.67e-2775
regional part of brain2.65e-2646
pre-chordal neural plate5.88e-2649
gray matter1.12e-2534
ectoderm-derived structure3.44e-2495
ectoderm3.44e-2495
presumptive ectoderm3.44e-2495
anterior neural tube1.17e-2340
regional part of forebrain1.37e-2239
forebrain1.37e-2239
future forebrain1.37e-2239
brain grey matter2.33e-2129
regional part of telencephalon2.33e-2129
telencephalon2.33e-2129
structure with developmental contribution from neural crest2.51e-1892
cerebral cortex1.17e-1421
cerebral hemisphere1.17e-1421
pallium1.17e-1421
regional part of cerebral cortex4.28e-1217
occipital lobe2.55e-1110
visual cortex2.55e-1110
neocortex2.55e-1110
posterior neural tube1.43e-0812
chordal neural plate1.43e-0812
basal ganglion6.60e-088
nuclear complex of neuraxis6.60e-088
aggregate regional part of brain6.60e-088
collection of basal ganglia6.60e-088
cerebral subcortex6.60e-088







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