FFCP PHASE1:Mm9::chr17:56148922..56148946,+: Difference between revisions
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|id=chr17:56148922..56148946,+ | |id=chr17:56148922..56148946,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.57e-16!50;CL:0002319!4.76e-14!43;CL:0002321!3.38e-13!70;CL:0000220!3.38e-13!70;CL:0000221!4.21e-13!44;CL:0000133!4.21e-13!44;CL:0000393!8.33e-12!39;CL:0000211!8.33e-12!39;CL:0000548!1.70e-09!115;CL:0000004!1.70e-09!115;CL:0000255!1.70e-09!115;CL:0000540!2.55e-09!33;CL:0000047!2.55e-09!33;CL:0000031!2.55e-09!33;CL:0000404!2.55e-09!33;CL:0000117!3.33e-09!23;CL:0000337!3.33e-09!23;CL:0002371!6.46e-09!118;CL:0000144!2.31e-08!121;CL:0000012!2.31e-08!121 | |ontology_enrichment_celltype=CL:0000055!9.57e-16!50;CL:0002319!4.76e-14!43;CL:0002321!3.38e-13!70;CL:0000220!3.38e-13!70;CL:0000221!4.21e-13!44;CL:0000133!4.21e-13!44;CL:0000393!8.33e-12!39;CL:0000211!8.33e-12!39;CL:0000548!1.70e-09!115;CL:0000004!1.70e-09!115;CL:0000255!1.70e-09!115;CL:0000540!2.55e-09!33;CL:0000047!2.55e-09!33;CL:0000031!2.55e-09!33;CL:0000404!2.55e-09!33;CL:0000117!3.33e-09!23;CL:0000337!3.33e-09!23;CL:0002371!6.46e-09!118;CL:0000144!2.31e-08!121;CL:0000012!2.31e-08!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.43e-16,70;CL:0002319,3.01e-15,43;CL:0000221,1.05e-14,44;CL:0000133,1.05e-14,44;CL:0000393,7.56e-12,39;CL:0000211,7.56e-12,39;CL:0000117,3.32e-10,23;CL:0000337,3.32e-10,23;CL:0000333,5.29e-09,10;CL:0000095,5.29e-09,10;CL:0000243,5.29e-09,10;CL:0000123,5.29e-09,10;CL:0000125,5.29e-09,10;CL:0000030,5.29e-09,10;CL:0000339,5.29e-09,10;CL:0000723,1.24e-08,91;CL:0000048,1.24e-08,91;CL:0000540,1.59e-08,33;CL:0000047,1.59e-08,33;CL:0000031,1.59e-08,33;CL:0000404,1.59e-08,33;CL:0002453,1.38e-07,8;CL:0000034,1.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.67e-19!75;UBERON:0001016!4.67e-19!75;UBERON:0001017!3.55e-18!73;UBERON:0005743!3.55e-18!73;UBERON:0002020!4.83e-14!34;UBERON:0004121!2.37e-13!102;UBERON:0000924!2.37e-13!102;UBERON:0006601!2.37e-13!102;UBERON:0001049!5.27e-13!52;UBERON:0005068!5.27e-13!52;UBERON:0006241!5.27e-13!52;UBERON:0007135!5.27e-13!52;UBERON:0000955!5.38e-12!50;UBERON:0006238!5.38e-12!50;UBERON:0002616!7.55e-12!49;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0002346!4.05e-10!71;UBERON:0003075!4.05e-10!71;UBERON:0007284!4.05e-10!71;UBERON:0000033!3.92e-09!63;UBERON:0003080!6.05e-09!40;UBERON:0002780!1.08e-08!39;UBERON:0001890!1.08e-08!39;UBERON:0006240!1.08e-08!39;UBERON:0002619!4.19e-08!17;UBERON:0000956!5.06e-08!21;UBERON:0001869!5.06e-08!21;UBERON:0000203!5.06e-08!21;UBERON:0003056!9.98e-08!49 | |ontology_enrichment_uberon=UBERON:0000073!4.67e-19!75;UBERON:0001016!4.67e-19!75;UBERON:0001017!3.55e-18!73;UBERON:0005743!3.55e-18!73;UBERON:0002020!4.83e-14!34;UBERON:0004121!2.37e-13!102;UBERON:0000924!2.37e-13!102;UBERON:0006601!2.37e-13!102;UBERON:0001049!5.27e-13!52;UBERON:0005068!5.27e-13!52;UBERON:0006241!5.27e-13!52;UBERON:0007135!5.27e-13!52;UBERON:0000955!5.38e-12!50;UBERON:0006238!5.38e-12!50;UBERON:0002616!7.55e-12!49;UBERON:0002791!1.03e-11!29;UBERON:0003528!1.03e-11!29;UBERON:0001893!1.03e-11!29;UBERON:0002346!4.05e-10!71;UBERON:0003075!4.05e-10!71;UBERON:0007284!4.05e-10!71;UBERON:0000033!3.92e-09!63;UBERON:0003080!6.05e-09!40;UBERON:0002780!1.08e-08!39;UBERON:0001890!1.08e-08!39;UBERON:0006240!1.08e-08!39;UBERON:0002619!4.19e-08!17;UBERON:0000956!5.06e-08!21;UBERON:0001869!5.06e-08!21;UBERON:0000203!5.06e-08!21;UBERON:0003056!9.98e-08!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.42e-20,75;UBERON:0001017,3.65e-19,73;UBERON:0000073,4.52e-17,54;UBERON:0002020,1.55e-16,34;UBERON:0001049,3.05e-15,52;UBERON:0005068,3.05e-15,52;UBERON:0006241,3.05e-15,52;UBERON:0007135,3.05e-15,52;UBERON:0004121,1.98e-14,95;UBERON:0000924,1.98e-14,95;UBERON:0006601,1.98e-14,95;UBERON:0003528,1.42e-13,29;UBERON:0002791,1.42e-13,29;UBERON:0001893,1.42e-13,29;UBERON:0002616,8.05e-12,46;UBERON:0002346,1.87e-11,64;UBERON:0003075,1.87e-11,64;UBERON:0007284,1.87e-11,64;UBERON:0000955,2.11e-11,47;UBERON:0006238,2.11e-11,47;UBERON:0002619,1.71e-10,17;UBERON:0002780,1.99e-10,39;UBERON:0001890,1.99e-10,39;UBERON:0006240,1.99e-10,39;UBERON:0003080,5.30e-10,40;UBERON:0010371,9.56e-10,73;UBERON:0000956,3.56e-09,21;UBERON:0001869,3.56e-09,21;UBERON:0000203,3.56e-09,21;UBERON:0002021,1.24e-07,10;UBERON:0000411,1.24e-07,10;UBERON:0001950,1.24e-07,10;UBERON:0010314,1.91e-07,92;UBERON:0003056,5.14e-07,49 | |||
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| ||
|short_description=p4@Mpnd | |short_description=p4@Mpnd | ||
}} | }} |
Revision as of 09:59, 14 November 2012
Short description: | p4@Mpnd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mpnd_5end |
Coexpression cluster: | NA |
Association with transcript: | 244bp_to_ENSMUST00000124302_5end |
EntrezGene: | Mpnd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.43e-16 | 70 |
neural cell | 3.01e-15 | 43 |
ectodermal cell | 1.05e-14 | 44 |
neurectodermal cell | 1.05e-14 | 44 |
electrically responsive cell | 7.56e-12 | 39 |
electrically active cell | 7.56e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.32e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.32e-10 | 23 |
migratory neural crest cell | 5.29e-09 | 10 |
neuron associated cell | 5.29e-09 | 10 |
glial cell (sensu Vertebrata) | 5.29e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 5.29e-09 | 10 |
glial cell | 5.29e-09 | 10 |
glioblast | 5.29e-09 | 10 |
glioblast (sensu Vertebrata) | 5.29e-09 | 10 |
somatic stem cell | 1.24e-08 | 91 |
multi fate stem cell | 1.24e-08 | 91 |
neuron | 1.59e-08 | 33 |
neuronal stem cell | 1.59e-08 | 33 |
neuroblast | 1.59e-08 | 33 |
electrically signaling cell | 1.59e-08 | 33 |
oligodendrocyte precursor cell | 1.38e-07 | 8 |
stem cell | 1.71e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.42e-20 | 75 |
central nervous system | 3.65e-19 | 73 |
regional part of nervous system | 4.52e-17 | 54 |
gray matter | 1.55e-16 | 34 |
neural tube | 3.05e-15 | 52 |
neural rod | 3.05e-15 | 52 |
future spinal cord | 3.05e-15 | 52 |
neural keel | 3.05e-15 | 52 |
ectoderm-derived structure | 1.98e-14 | 95 |
ectoderm | 1.98e-14 | 95 |
presumptive ectoderm | 1.98e-14 | 95 |
brain grey matter | 1.42e-13 | 29 |
regional part of telencephalon | 1.42e-13 | 29 |
telencephalon | 1.42e-13 | 29 |
regional part of brain | 8.05e-12 | 46 |
neurectoderm | 1.87e-11 | 64 |
neural plate | 1.87e-11 | 64 |
presumptive neural plate | 1.87e-11 | 64 |
brain | 2.11e-11 | 47 |
future brain | 2.11e-11 | 47 |
regional part of cerebral cortex | 1.71e-10 | 17 |
regional part of forebrain | 1.99e-10 | 39 |
forebrain | 1.99e-10 | 39 |
future forebrain | 1.99e-10 | 39 |
anterior neural tube | 5.30e-10 | 40 |
ecto-epithelium | 9.56e-10 | 73 |
cerebral cortex | 3.56e-09 | 21 |
cerebral hemisphere | 3.56e-09 | 21 |
pallium | 3.56e-09 | 21 |
occipital lobe | 1.24e-07 | 10 |
visual cortex | 1.24e-07 | 10 |
neocortex | 1.24e-07 | 10 |
structure with developmental contribution from neural crest | 1.91e-07 | 92 |
pre-chordal neural plate | 5.14e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.