FFCP PHASE1:Mm9::chr17:54438043..54438057,-: Difference between revisions
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|id=chr17:54438043..54438057,- | |id=chr17:54438043..54438057,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,3.81e-17,3;CL:0000117,1.37e-14,23;CL:0000337,1.37e-14,23;CL:0002611,1.77e-12,2;CL:0000540,6.59e-10,33;CL:0000047,6.59e-10,33;CL:0000031,6.59e-10,33;CL:0000404,6.59e-10,33;CL:0000393,3.02e-08,39;CL:0000211,3.02e-08,39;CL:0002610,4.63e-08,3;CL:0002319,2.15e-07,43;CL:0000221,3.32e-07,44;CL:0000133,3.32e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.58e-07!6;UBERON:0005174!1.58e-07!6;UBERON:0001137!1.58e-07!6 | |ontology_enrichment_uberon=UBERON:0002240!1.58e-07!6;UBERON:0005174!1.58e-07!6;UBERON:0001137!1.58e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.35e-33,6;UBERON:0005174,1.35e-33,6;UBERON:0001137,1.35e-33,6;UBERON:0003076,1.47e-29,12;UBERON:0003057,1.47e-29,12;UBERON:0001948,6.03e-28,5;UBERON:0002315,6.03e-28,5;UBERON:0002257,3.81e-17,3;UBERON:0000073,7.98e-16,54;UBERON:0001049,4.03e-14,52;UBERON:0005068,4.03e-14,52;UBERON:0006241,4.03e-14,52;UBERON:0007135,4.03e-14,52;UBERON:0001017,2.50e-13,73;UBERON:0001016,6.35e-13,75;UBERON:0001896,1.20e-12,2;UBERON:0002298,1.20e-12,2;UBERON:0005290,1.20e-12,2;UBERON:0010096,1.20e-12,2;UBERON:0002256,1.77e-12,2;UBERON:0002346,3.60e-11,64;UBERON:0003075,3.60e-11,64;UBERON:0007284,3.60e-11,64;UBERON:0004121,8.23e-10,95;UBERON:0000924,8.23e-10,95;UBERON:0006601,8.23e-10,95;UBERON:0010371,1.37e-09,73;UBERON:0000489,2.31e-09,21;UBERON:0004684,4.63e-08,3;UBERON:0002275,4.63e-08,3;UBERON:0002020,1.95e-07,34;UBERON:0010314,2.95e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,9.14083150092171,3.75476519617743,0.244981598429908,0,0,2.20231761998777,0.383062014255563,2.30409799884365,0.131886287730194,0.274462930807229,0,4.18774498502071,0,0,3.24091444021034,4.9830088279686,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.599162557619291,2.74500361691176,0.628271760564322,0,0.255715457330331,4.57133698031032,2.43361894601636,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0.696710015581316,0.38660238396628,1.00841762311671,1.33426826306922,0.380451252225118,0,0.988193728344065,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,5.9403718295483,8.43924143463863,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0,0,0,0,0,0,0,0,0.922305443831782,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0.164549020602121,0,0,0,0.882113592219848,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,13.5360470467672,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.86404272657441,0.418176592028937,0.655087691238533,0.944050424693745,0.578574190077352,0.523511883968059,0,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.579568782096571,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.579421629724277,0.77163688185482,0,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0.818462086339379,0,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,9.14083150092171,3.75476519617743,0.244981598429908,0,0,2.20231761998777,0.383062014255563,2.30409799884365,0.131886287730194,0.274462930807229,0,4.18774498502071,0,0,3.24091444021034,4.9830088279686,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.599162557619291,2.74500361691176,0.628271760564322,0,0.255715457330331,4.57133698031032,2.43361894601636,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0,0,0,0.696710015581316,0.38660238396628,1.00841762311671,1.33426826306922,0.380451252225118,0,0.988193728344065,0.754005626400808,0.795825888164603,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0.491764273019036,0,5.9403718295483,8.43924143463863,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.876767573733936,0,0,0,0,0,0,0,0,0,0,0,0.922305443831782,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0.428674070063185,0,0,0.164549020602121,0,0,0,0.882113592219848,0,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,13.5360470467672,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,0.86404272657441,0.418176592028937,0.655087691238533,0.944050424693745,0.578574190077352,0.523511883968059,0,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0,0.241584120826006,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.579568782096571,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.579421629724277,0.77163688185482,0,0.147198920134397,0.342869252385415,0.177475806159338,0.953744759789284,0,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0.818462086339379,0,0.192906610981141,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.441182838239031,0.463735671240843 | ||
|short_description=p1@Slc5a7 | |short_description=p1@Slc5a7 | ||
}} | }} |
Revision as of 01:38, 15 November 2012
Short description: | p1@Slc5a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc5a7_5end |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | 301bp_to_ENSMUST00000095712, NM_022025, uc008czy.1_5end |
EntrezGene: | Slc5a7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 3.81e-17 | 3 |
CNS neuron (sensu Vertebrata) | 1.37e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.37e-14 | 23 |
neuron of the dorsal spinal cord | 1.77e-12 | 2 |
neuron | 6.59e-10 | 33 |
neuronal stem cell | 6.59e-10 | 33 |
neuroblast | 6.59e-10 | 33 |
electrically signaling cell | 6.59e-10 | 33 |
electrically responsive cell | 3.02e-08 | 39 |
electrically active cell | 3.02e-08 | 39 |
raphe nuclei neuron | 4.63e-08 | 3 |
neural cell | 2.15e-07 | 43 |
ectodermal cell | 3.32e-07 | 44 |
neurectodermal cell | 3.32e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.35e-33 | 6 |
dorsal region element | 1.35e-33 | 6 |
dorsum | 1.35e-33 | 6 |
posterior neural tube | 1.47e-29 | 12 |
chordal neural plate | 1.47e-29 | 12 |
regional part of spinal cord | 6.03e-28 | 5 |
gray matter of spinal cord | 6.03e-28 | 5 |
ventral horn of spinal cord | 3.81e-17 | 3 |
regional part of nervous system | 7.98e-16 | 54 |
neural tube | 4.03e-14 | 52 |
neural rod | 4.03e-14 | 52 |
future spinal cord | 4.03e-14 | 52 |
neural keel | 4.03e-14 | 52 |
central nervous system | 2.50e-13 | 73 |
nervous system | 6.35e-13 | 75 |
medulla oblongata | 1.20e-12 | 2 |
brainstem | 1.20e-12 | 2 |
myelencephalon | 1.20e-12 | 2 |
future myelencephalon | 1.20e-12 | 2 |
dorsal horn of spinal cord | 1.77e-12 | 2 |
neurectoderm | 3.60e-11 | 64 |
neural plate | 3.60e-11 | 64 |
presumptive neural plate | 3.60e-11 | 64 |
ectoderm-derived structure | 8.23e-10 | 95 |
ectoderm | 8.23e-10 | 95 |
presumptive ectoderm | 8.23e-10 | 95 |
ecto-epithelium | 1.37e-09 | 73 |
cavitated compound organ | 2.31e-09 | 21 |
raphe nuclei | 4.63e-08 | 3 |
reticular formation | 4.63e-08 | 3 |
gray matter | 1.95e-07 | 34 |
structure with developmental contribution from neural crest | 2.95e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.