FFCP PHASE1:Hg19::chr12:53298841..53298867,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!5.75e-46!254;CL:0000223!1.05e-15!59;CL:0002076!3.10e-10!43;CL:0000077!3.31e-10!19;CL:1000497!4.53e-08!18;CL:0002518!4.53e-08!18;CL:1000449!2.24e-07!16;CL:0002321!3.43e-07!248;CL:0000082!7.67e-07!19;CL:1000507!8.37e-07!12;CL:1000494!8.37e-07!12;CL:0000220!8.53e-07!246 | |ontology_enrichment_celltype=CL:0000066!5.75e-46!254;CL:0000223!1.05e-15!59;CL:0002076!3.10e-10!43;CL:0000077!3.31e-10!19;CL:1000497!4.53e-08!18;CL:0002518!4.53e-08!18;CL:1000449!2.24e-07!16;CL:0002321!3.43e-07!248;CL:0000082!7.67e-07!19;CL:1000507!8.37e-07!12;CL:1000494!8.37e-07!12;CL:0000220!8.53e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000077;9.22e-11;19!CL:0002076;1.95e-08;42!CL:1000497;2.20e-08;17!CL:0002518;2.20e-08;17!CL:1000507;2.48e-08;10!CL:1000494;2.48e-08;10!CL:1000449;1.20e-07;15 | |ontology_enrichment_celltype_v019=CL:0000077;9.22e-11;19!CL:0002076;1.95e-08;42!CL:1000497;2.20e-08;17!CL:0002518;2.20e-08;17!CL:1000507;2.48e-08;10!CL:1000494;2.48e-08;10!CL:1000449;1.20e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.05e-48,253;CL:0000223,1.42e-17,58;CL:0002076,1.19e-11,42;CL:0000077,8.68e-11,19;CL:1000497,2.15e-08,17;CL:0002518,2.15e-08,17;CL:1000507,2.45e-08,10;CL:1000494,2.45e-08,10;CL:1000449,1.18e-07,15;CL:0002321,2.15e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000223;1.31e-09;58!UBERON:0001041;4.45e-09;30!UBERON:0008947;1.91e-08;29!UBERON:0006595;1.03e-07;86 | |ontology_enrichment_development_v019=CL:0000223;1.31e-09;58!UBERON:0001041;4.45e-09;30!UBERON:0008947;1.91e-08;29!UBERON:0006595;1.03e-07;86 | ||
|ontology_enrichment_disease=DOID:305!6.46e-32!106;DOID:0050687!1.59e-25!143;DOID:162!9.00e-19!235;DOID:14566!2.19e-17!239;DOID:299!2.22e-10!25;DOID:7!2.15e-07!39 | |ontology_enrichment_disease=DOID:305!6.46e-32!106;DOID:0050687!1.59e-25!143;DOID:162!9.00e-19!235;DOID:14566!2.19e-17!239;DOID:299!2.22e-10!25;DOID:7!2.15e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:299;4.39e-11;25!DOID:305;3.84e-10;106 | |ontology_enrichment_disease_v019=DOID:299;4.39e-11;25!DOID:305;3.84e-10;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,4.96e-33,106;DOID:0050687,3.57e-25,143;DOID:162,6.88e-18,235;DOID:14566,2.31e-16,239;DOID:299,4.30e-11,25;DOID:7,2.21e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.27e-25!169;UBERON:0000925!1.27e-25!169;UBERON:0006595!1.27e-25!169;UBERON:0004921!4.69e-24!129;UBERON:0004185!4.69e-24!129;UBERON:0005177!1.15e-22!107;UBERON:0001007!6.44e-22!155;UBERON:0001555!6.44e-22!155;UBERON:0007026!6.44e-22!155;UBERON:0000466!8.12e-22!126;UBERON:0000077!2.02e-20!130;UBERON:0001048!2.05e-20!168;UBERON:0001041!1.59e-19!98;UBERON:0003104!2.40e-19!238;UBERON:0009142!2.40e-19!238;UBERON:0000481!1.10e-17!347;UBERON:0005911!2.38e-17!82;UBERON:0009569!3.29e-17!113;UBERON:0005172!5.76e-17!55;UBERON:0005173!5.76e-17!55;UBERON:0000464!1.69e-14!104;UBERON:0002417!4.14e-14!61;UBERON:0000916!4.14e-14!61;UBERON:0006554!8.71e-12!44;UBERON:0001008!9.90e-12!45;UBERON:0002100!1.08e-10!216;UBERON:0008947!1.25e-10!38;UBERON:0003258!1.25e-10!38;UBERON:0002113!1.39e-10!27;UBERON:0003918!1.39e-10!27;UBERON:0005095!1.39e-10!27;UBERON:0007687!1.39e-10!27;UBERON:0009856!1.66e-10!26;UBERON:0007499!1.77e-10!25;UBERON:0003929!7.35e-10!54;UBERON:0003103!7.42e-10!69;UBERON:0009497!1.28e-09!25;UBERON:0000015!1.28e-09!25;UBERON:0002423!1.28e-09!25;UBERON:0006235!1.28e-09!25;UBERON:0004161!1.28e-09!25;UBERON:0000065!2.11e-09!53;UBERON:0002530!4.50e-09!59;UBERON:0000063!4.92e-09!97;UBERON:0009854!5.52e-09!23;UBERON:0000058!5.77e-09!26;UBERON:0008835!6.02e-09!22;UBERON:0003894!6.02e-09!22;UBERON:0002365!7.16e-09!31;UBERON:0002330!7.16e-09!31;UBERON:0000489!7.39e-09!32;UBERON:0000072!7.51e-09!46;UBERON:0001004!7.86e-09!72;UBERON:0000949!1.33e-08!45;UBERON:0002553!4.08e-08!70;UBERON:0002107!7.73e-08!19;UBERON:0006925!7.73e-08!19;UBERON:0008836!7.73e-08!19;UBERON:0005178!1.14e-07!34;UBERON:0002224!1.14e-07!34;UBERON:0000062!1.86e-07!511;UBERON:0002368!2.19e-07!35;UBERON:0004211!2.24e-07!16;UBERON:0001285!2.24e-07!16;UBERON:0007684!2.24e-07!16;UBERON:0003220!2.24e-07!16;UBERON:0004208!2.24e-07!16;UBERON:0006555!2.58e-07!17;UBERON:0005103!2.58e-07!17;UBERON:0000083!2.58e-07!17;UBERON:0009201!2.58e-07!17;UBERON:0004819!2.58e-07!17;UBERON:0006553!2.58e-07!17;UBERON:0003074!2.58e-07!17;UBERON:0003060!2.58e-07!17;UBERON:0000080!2.85e-07!18;UBERON:0002120!2.85e-07!18;UBERON:0004875!2.85e-07!18;UBERON:0005721!2.85e-07!18;UBERON:0005754!2.85e-07!18;UBERON:0007297!2.85e-07!18;UBERON:0005153!2.93e-07!37;UBERON:0007625!4.21e-07!11;UBERON:0003064!4.33e-07!37;UBERON:0005181!4.53e-07!35;UBERON:0000064!5.46e-07!219;UBERON:0003886!5.84e-07!63;UBERON:0004876!6.42e-07!20;UBERON:0002048!7.09e-07!22;UBERON:0000117!7.09e-07!22;UBERON:0000171!7.09e-07!22;UBERON:0000170!7.09e-07!22;UBERON:0005597!7.09e-07!22;UBERON:0000118!7.09e-07!22;UBERON:0005409!7.25e-07!35;UBERON:0004802!7.67e-07!19;UBERON:0000115!7.67e-07!19;UBERON:0009773!8.37e-07!12;UBERON:0001231!8.37e-07!12;UBERON:0004810!8.37e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!1.27e-25!169;UBERON:0000925!1.27e-25!169;UBERON:0006595!1.27e-25!169;UBERON:0004921!4.69e-24!129;UBERON:0004185!4.69e-24!129;UBERON:0005177!1.15e-22!107;UBERON:0001007!6.44e-22!155;UBERON:0001555!6.44e-22!155;UBERON:0007026!6.44e-22!155;UBERON:0000466!8.12e-22!126;UBERON:0000077!2.02e-20!130;UBERON:0001048!2.05e-20!168;UBERON:0001041!1.59e-19!98;UBERON:0003104!2.40e-19!238;UBERON:0009142!2.40e-19!238;UBERON:0000481!1.10e-17!347;UBERON:0005911!2.38e-17!82;UBERON:0009569!3.29e-17!113;UBERON:0005172!5.76e-17!55;UBERON:0005173!5.76e-17!55;UBERON:0000464!1.69e-14!104;UBERON:0002417!4.14e-14!61;UBERON:0000916!4.14e-14!61;UBERON:0006554!8.71e-12!44;UBERON:0001008!9.90e-12!45;UBERON:0002100!1.08e-10!216;UBERON:0008947!1.25e-10!38;UBERON:0003258!1.25e-10!38;UBERON:0002113!1.39e-10!27;UBERON:0003918!1.39e-10!27;UBERON:0005095!1.39e-10!27;UBERON:0007687!1.39e-10!27;UBERON:0009856!1.66e-10!26;UBERON:0007499!1.77e-10!25;UBERON:0003929!7.35e-10!54;UBERON:0003103!7.42e-10!69;UBERON:0009497!1.28e-09!25;UBERON:0000015!1.28e-09!25;UBERON:0002423!1.28e-09!25;UBERON:0006235!1.28e-09!25;UBERON:0004161!1.28e-09!25;UBERON:0000065!2.11e-09!53;UBERON:0002530!4.50e-09!59;UBERON:0000063!4.92e-09!97;UBERON:0009854!5.52e-09!23;UBERON:0000058!5.77e-09!26;UBERON:0008835!6.02e-09!22;UBERON:0003894!6.02e-09!22;UBERON:0002365!7.16e-09!31;UBERON:0002330!7.16e-09!31;UBERON:0000489!7.39e-09!32;UBERON:0000072!7.51e-09!46;UBERON:0001004!7.86e-09!72;UBERON:0000949!1.33e-08!45;UBERON:0002553!4.08e-08!70;UBERON:0002107!7.73e-08!19;UBERON:0006925!7.73e-08!19;UBERON:0008836!7.73e-08!19;UBERON:0005178!1.14e-07!34;UBERON:0002224!1.14e-07!34;UBERON:0000062!1.86e-07!511;UBERON:0002368!2.19e-07!35;UBERON:0004211!2.24e-07!16;UBERON:0001285!2.24e-07!16;UBERON:0007684!2.24e-07!16;UBERON:0003220!2.24e-07!16;UBERON:0004208!2.24e-07!16;UBERON:0006555!2.58e-07!17;UBERON:0005103!2.58e-07!17;UBERON:0000083!2.58e-07!17;UBERON:0009201!2.58e-07!17;UBERON:0004819!2.58e-07!17;UBERON:0006553!2.58e-07!17;UBERON:0003074!2.58e-07!17;UBERON:0003060!2.58e-07!17;UBERON:0000080!2.85e-07!18;UBERON:0002120!2.85e-07!18;UBERON:0004875!2.85e-07!18;UBERON:0005721!2.85e-07!18;UBERON:0005754!2.85e-07!18;UBERON:0007297!2.85e-07!18;UBERON:0005153!2.93e-07!37;UBERON:0007625!4.21e-07!11;UBERON:0003064!4.33e-07!37;UBERON:0005181!4.53e-07!35;UBERON:0000064!5.46e-07!219;UBERON:0003886!5.84e-07!63;UBERON:0004876!6.42e-07!20;UBERON:0002048!7.09e-07!22;UBERON:0000117!7.09e-07!22;UBERON:0000171!7.09e-07!22;UBERON:0000170!7.09e-07!22;UBERON:0005597!7.09e-07!22;UBERON:0000118!7.09e-07!22;UBERON:0005409!7.25e-07!35;UBERON:0004802!7.67e-07!19;UBERON:0000115!7.67e-07!19;UBERON:0009773!8.37e-07!12;UBERON:0001231!8.37e-07!12;UBERON:0004810!8.37e-07!12 | ||
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| ||
|short_description=p1@KRT8 | |short_description=p1@KRT8 | ||
}} | }} |
Revision as of 07:42, 19 November 2012
Short description: | p1@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_KRT8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000293308, NM_002273, uc001sbd.2, uc009zmj.2_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | P05787 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.05e-48 | 253 |
endodermal cell | 1.42e-17 | 58 |
endo-epithelial cell | 1.19e-11 | 42 |
mesothelial cell | 8.68e-11 | 19 |
kidney cell | 2.15e-08 | 17 |
kidney epithelial cell | 2.15e-08 | 17 |
kidney tubule cell | 2.45e-08 | 10 |
nephron tubule epithelial cell | 2.45e-08 | 10 |
epithelial cell of nephron | 1.18e-07 | 15 |
embryonic cell | 2.15e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.96e-33 | 106 |
cell type cancer | 3.57e-25 | 143 |
cancer | 6.88e-18 | 235 |
disease of cellular proliferation | 2.31e-16 | 239 |
adenocarcinoma | 4.30e-11 | 25 |
disease of anatomical entity | 2.21e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.