FFCP PHASE1:Hg19::chr5:179507817..179507822,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000839!2.73e-18!70;CL:0000557!6.86e-18!71;CL:0000766!4.70e-16!76;CL:0000738!3.74e-15!140;CL:0000037!5.49e-15!172;CL:0000566!5.49e-15!172;CL:0002031!4.84e-14!124;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000763!2.02e-13!112;CL:0000049!2.02e-13!112;CL:0000988!2.54e-13!182;CL:0002009!3.79e-13!65;CL:0002032!3.33e-12!165;CL:0000837!3.33e-12!165;CL:0002087!5.94e-12!119;CL:0002057!8.30e-12!42;CL:0000860!1.25e-10!45;CL:0002274!2.83e-10!5;CL:0000457!2.83e-10!5;CL:0002191!2.83e-10!5;CL:0000097!2.83e-10!5;CL:0000831!2.83e-10!5;CL:0002028!2.83e-10!5;CL:0002619!9.26e-07!3 | |ontology_enrichment_celltype=CL:0000839!2.73e-18!70;CL:0000557!6.86e-18!71;CL:0000766!4.70e-16!76;CL:0000738!3.74e-15!140;CL:0000037!5.49e-15!172;CL:0000566!5.49e-15!172;CL:0002031!4.84e-14!124;CL:0002194!8.02e-14!63;CL:0000576!8.02e-14!63;CL:0000040!8.02e-14!63;CL:0000559!8.02e-14!63;CL:0000763!2.02e-13!112;CL:0000049!2.02e-13!112;CL:0000988!2.54e-13!182;CL:0002009!3.79e-13!65;CL:0002032!3.33e-12!165;CL:0000837!3.33e-12!165;CL:0002087!5.94e-12!119;CL:0002057!8.30e-12!42;CL:0000860!1.25e-10!45;CL:0002274!2.83e-10!5;CL:0000457!2.83e-10!5;CL:0002191!2.83e-10!5;CL:0000097!2.83e-10!5;CL:0000831!2.83e-10!5;CL:0002028!2.83e-10!5;CL:0002619!9.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.45e-33;5!CL:0002619;2.13e-20;3!CL:0000163;1.36e-18;9!CL:0000784;2.02e-09;3!CL:0000766;9.64e-09;69 | |ontology_enrichment_celltype_v019=CL:0000097;1.45e-33;5!CL:0002619;2.13e-20;3!CL:0000163;1.36e-18;9!CL:0000784;2.02e-09;3!CL:0000766;9.64e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.28e-33,5;CL:0002028,1.28e-33,5;CL:0002619,1.11e-20,3;CL:0000163,1.27e-18,9;CL:0000839,3.11e-16,66;CL:0000557,5.93e-16,67;CL:0000766,1.13e-14,72;CL:0000763,4.62e-12,108;CL:0000049,4.62e-12,108;CL:0000784,1.94e-09,3;CL:0002031,8.91e-08,120;CL:0000037,1.04e-07,168;CL:0000738,1.09e-07,136;CL:0002194,3.31e-07,59;CL:0000576,3.31e-07,59;CL:0000040,3.31e-07,59;CL:0000559,3.31e-07,59;CL:0000988,3.77e-07,177;CL:0002032,4.37e-07,161;CL:0000837,4.37e-07,161;CL:0002009,6.27e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.11e-07;1!UBERON:0005425;1.11e-07;1 | |ontology_enrichment_development_v019=UBERON:0001045;1.11e-07;1!UBERON:0005425;1.11e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;1.11e-07;1 | |ontology_enrichment_disease_v019=DOID:9119;1.11e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:9119,6.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-22!102;UBERON:0003061!1.15e-22!102;UBERON:0002193!1.50e-21!112;UBERON:0007023!1.20e-17!115;UBERON:0002371!7.64e-16!80;UBERON:0001474!4.91e-14!86;UBERON:0002405!5.82e-14!115;UBERON:0004765!1.63e-10!101;UBERON:0001434!1.63e-10!101;UBERON:0003081!6.86e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!1.15e-22!102;UBERON:0003061!1.15e-22!102;UBERON:0002193!1.50e-21!112;UBERON:0007023!1.20e-17!115;UBERON:0002371!7.64e-16!80;UBERON:0001474!4.91e-14!86;UBERON:0002405!5.82e-14!115;UBERON:0004765!1.63e-10!101;UBERON:0001434!1.63e-10!101;UBERON:0003081!6.86e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.11e-07;1!UBERON:0000996;1.11e-07;1!UBERON:0000941;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0002171;1.11e-07;1!UBERON:0001785;1.11e-07;1!UBERON:0002464;1.11e-07;1!UBERON:0004904;1.11e-07;1!UBERON:0009854;1.11e-07;1!UBERON:0001021;1.11e-07;1!UBERON:0006518;1.11e-07;1!UBERON:0008949;1.11e-07;1!UBERON:0000101;1.11e-07;1!UBERON:0002167;1.11e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001154;1.11e-07;1!UBERON:0000996;1.11e-07;1!UBERON:0000941;1.11e-07;1!UBERON:0001153;1.11e-07;1!UBERON:0002171;1.11e-07;1!UBERON:0001785;1.11e-07;1!UBERON:0002464;1.11e-07;1!UBERON:0004904;1.11e-07;1!UBERON:0009854;1.11e-07;1!UBERON:0001021;1.11e-07;1!UBERON:0006518;1.11e-07;1!UBERON:0008949;1.11e-07;1!UBERON:0000101;1.11e-07;1!UBERON:0002167;1.11e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.11e-14,76;UBERON:0002390,1.58e-13,98;UBERON:0003061,1.58e-13,98;UBERON:0001474,1.42e-12,82;UBERON:0002193,5.41e-12,108;UBERON:0004765,3.15e-11,90;UBERON:0002405,8.79e-11,93;UBERON:0001434,7.57e-10,100;UBERON:0000941,9.10e-08,1;UBERON:0001785,9.10e-08,1;UBERON:0002464,9.10e-08,1;UBERON:0004904,9.10e-08,1;UBERON:0001021,9.10e-08,1;UBERON:0003902,9.10e-08,1;UBERON:0005425,9.10e-08,1;UBERON:0000996,1.04e-07,1;UBERON:0002171,1.26e-07,1;UBERON:0006518,1.26e-07,1;UBERON:0008949,1.26e-07,1;UBERON:0000101,1.26e-07,1;UBERON:0002167,1.26e-07,1;UBERON:0001154,1.75e-07,1;UBERON:0001153,1.75e-07,1;UBERON:0001045,1.75e-07,1 | |||
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| ||
|short_description=p@chr5:179507817..179507822,- | |short_description=p@chr5:179507817..179507822,- | ||
}} | }} |
Revision as of 22:14, 19 November 2012
Short description: | p@chr5:179507817..179507822, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:179507817..179507822, - |
Coexpression cluster: | C104_Mast_Basophils_immature_CD14_CD34_eye_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.28e-33 | 5 |
basophil mast progenitor cell | 1.28e-33 | 5 |
adult endothelial progenitor cell | 1.11e-20 | 3 |
endocrine cell | 1.27e-18 | 9 |
myeloid lineage restricted progenitor cell | 3.11e-16 | 66 |
granulocyte monocyte progenitor cell | 5.93e-16 | 67 |
myeloid leukocyte | 1.13e-14 | 72 |
myeloid cell | 4.62e-12 | 108 |
common myeloid progenitor | 4.62e-12 | 108 |
plasmacytoid dendritic cell | 1.94e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 8.91e-08 | 120 |
hematopoietic stem cell | 1.04e-07 | 168 |
leukocyte | 1.09e-07 | 136 |
monopoietic cell | 3.31e-07 | 59 |
monocyte | 3.31e-07 | 59 |
monoblast | 3.31e-07 | 59 |
promonocyte | 3.31e-07 | 59 |
hematopoietic cell | 3.77e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.37e-07 | 161 |
macrophage dendritic cell progenitor | 6.27e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.11e-14 | 76 |
hematopoietic system | 1.58e-13 | 98 |
blood island | 1.58e-13 | 98 |
bone element | 1.42e-12 | 82 |
hemolymphoid system | 5.41e-12 | 108 |
skeletal element | 3.15e-11 | 90 |
immune system | 8.79e-11 | 93 |
skeletal system | 7.57e-10 | 100 |
cranial nerve II | 9.10e-08 | 1 |
cranial nerve | 9.10e-08 | 1 |
nerve trunk | 9.10e-08 | 1 |
nerve connecting eye with brain | 9.10e-08 | 1 |
nerve | 9.10e-08 | 1 |
retinal neural layer | 9.10e-08 | 1 |
presumptive neural retina | 9.10e-08 | 1 |
vagina | 1.04e-07 | 1 |
lower lobe of right lung | 1.26e-07 | 1 |
right lung lobe | 1.26e-07 | 1 |
lower lobe of lung | 1.26e-07 | 1 |
lobe of lung | 1.26e-07 | 1 |
right lung | 1.26e-07 | 1 |
vermiform appendix | 1.75e-07 | 1 |
caecum | 1.75e-07 | 1 |
midgut | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.10e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.