FFCP PHASE1:Hg19::chr20:6034598..6034603,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000077!9.77e-25!19;CL:1000449!2.34e-24!16;CL:1000497!1.79e-21!18;CL:0002518!1.79e-21!18;CL:1000507!4.62e-20!12;CL:1000494!4.62e-20!12;CL:0002681!2.90e-18!13;CL:0002584!2.90e-18!13;CL:1000612!4.98e-12!7;CL:1000746!4.98e-12!7;CL:0002563!2.56e-11!4;CL:0002253!1.22e-10!2;CL:0000213!2.74e-10!57;CL:0000215!2.74e-10!57;CL:0000066!2.76e-08!254;CL:0000650!6.24e-08!3;CL:1000618!6.24e-08!3;CL:1001318!6.24e-08!3;CL:0002173!6.24e-08!3;CL:1000500!6.24e-08!3;CL:0000239!1.39e-07!3;CL:1000615!1.39e-07!3;CL:0002306!1.39e-07!3 | |ontology_enrichment_celltype=CL:0000077!9.77e-25!19;CL:1000449!2.34e-24!16;CL:1000497!1.79e-21!18;CL:0002518!1.79e-21!18;CL:1000507!4.62e-20!12;CL:1000494!4.62e-20!12;CL:0002681!2.90e-18!13;CL:0002584!2.90e-18!13;CL:1000612!4.98e-12!7;CL:1000746!4.98e-12!7;CL:0002563!2.56e-11!4;CL:0002253!1.22e-10!2;CL:0000213!2.74e-10!57;CL:0000215!2.74e-10!57;CL:0000066!2.76e-08!254;CL:0000650!6.24e-08!3;CL:1000618!6.24e-08!3;CL:1001318!6.24e-08!3;CL:0002173!6.24e-08!3;CL:1000500!6.24e-08!3;CL:0000239!1.39e-07!3;CL:1000615!1.39e-07!3;CL:0002306!1.39e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000449;2.60e-42;15!CL:1000497;2.69e-37;17!CL:0002518;2.69e-37;17!CL:1000507;5.72e-33;10!CL:1000494;5.72e-33;10!CL:1000746;3.16e-30;7!CL:1000612;3.16e-30;7!CL:0000650;2.23e-27;2!CL:1000500;2.23e-27;2!CL:1000618;2.23e-27;2!CL:1001318;2.23e-27;2!CL:0002173;2.23e-27;2!CL:0002681;3.01e-27;12!CL:0002584;3.01e-27;12!CL:0000077;1.69e-17;19!CL:0000669;3.26e-14;4!CL:0002188;2.06e-11;5!CL:0002097;7.52e-08;2!CL:0000213;9.39e-08;58!CL:0000215;9.39e-08;58 | |ontology_enrichment_celltype_v019=CL:1000449;2.60e-42;15!CL:1000497;2.69e-37;17!CL:0002518;2.69e-37;17!CL:1000507;5.72e-33;10!CL:1000494;5.72e-33;10!CL:1000746;3.16e-30;7!CL:1000612;3.16e-30;7!CL:0000650;2.23e-27;2!CL:1000500;2.23e-27;2!CL:1000618;2.23e-27;2!CL:1001318;2.23e-27;2!CL:0002173;2.23e-27;2!CL:0002681;3.01e-27;12!CL:0002584;3.01e-27;12!CL:0000077;1.69e-17;19!CL:0000669;3.26e-14;4!CL:0002188;2.06e-11;5!CL:0002097;7.52e-08;2!CL:0000213;9.39e-08;58!CL:0000215;9.39e-08;58 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.77e-42,15;CL:1000497,2.84e-37,17;CL:0002518,2.84e-37,17;CL:1000507,4.69e-33,10;CL:1000494,4.69e-33,10;CL:1000746,3.83e-30,7;CL:1000612,3.83e-30,7;CL:0000650,1.83e-27,2;CL:1000500,1.83e-27,2;CL:1000618,1.83e-27,2;CL:1001318,1.83e-27,2;CL:0002173,1.83e-27,2;CL:0002681,3.45e-27,12;CL:0002584,3.45e-27,12;CL:0000077,1.55e-17,19;CL:0000669,2.95e-14,4;CL:0002188,2.54e-11,5;CL:0000213,1.22e-10,58;CL:0000215,1.22e-10,58;CL:0002097,6.15e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.02e-08!14 | |ontology_enrichment_disease=DOID:2394!1.02e-08!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!2.34e-24!16;UBERON:0001285!2.34e-24!16;UBERON:0007684!2.34e-24!16;UBERON:0003220!2.34e-24!16;UBERON:0004208!2.34e-24!16;UBERON:0006555!7.87e-23!17;UBERON:0005103!7.87e-23!17;UBERON:0000083!7.87e-23!17;UBERON:0009201!7.87e-23!17;UBERON:0004819!7.87e-23!17;UBERON:0006553!7.87e-23!17;UBERON:0003074!7.87e-23!17;UBERON:0003060!7.87e-23!17;UBERON:0000080!1.79e-21!18;UBERON:0002120!1.79e-21!18;UBERON:0004875!1.79e-21!18;UBERON:0005721!1.79e-21!18;UBERON:0005754!1.79e-21!18;UBERON:0007297!1.79e-21!18;UBERON:0009773!4.62e-20!12;UBERON:0001231!4.62e-20!12;UBERON:0004810!4.62e-20!12;UBERON:0004876!3.65e-19!20;UBERON:0001851!3.79e-19!16;UBERON:0001225!2.90e-18!13;UBERON:0008987!2.90e-18!13;UBERON:0003887!3.56e-18!21;UBERON:0002113!6.55e-17!27;UBERON:0003918!6.55e-17!27;UBERON:0005095!6.55e-17!27;UBERON:0007687!6.55e-17!27;UBERON:0005172!7.16e-15!55;UBERON:0005173!7.16e-15!55;UBERON:0003064!2.15e-14!37;UBERON:0000058!2.27e-14!26;UBERON:0000489!5.71e-14!32;UBERON:0000353!9.59e-14!17;UBERON:0002417!4.13e-13!61;UBERON:0000916!4.13e-13!61;UBERON:0003886!1.59e-12!63;UBERON:0000074!4.98e-12!7;UBERON:0001229!4.98e-12!7;UBERON:0001230!4.98e-12!7;UBERON:0005749!4.98e-12!7;UBERON:0004199!4.98e-12!7;UBERON:0004209!4.98e-12!7;UBERON:0004198!4.98e-12!7;UBERON:0006554!1.21e-11!44;UBERON:0001008!2.46e-11!45;UBERON:0001242!2.56e-11!4;UBERON:0001262!2.56e-11!4;UBERON:0004786!2.56e-11!4;UBERON:0004808!2.56e-11!4;UBERON:0001277!2.56e-11!4;UBERON:0002553!5.64e-11!70;UBERON:0003350!3.76e-09!5;UBERON:0000466!8.69e-09!126;UBERON:0000464!9.82e-09!104;UBERON:0005177!1.93e-08!107;UBERON:0003567!6.24e-08!3;UBERON:0003838!6.24e-08!3;UBERON:0005169!6.24e-08!3;UBERON:0002321!6.24e-08!3;UBERON:0005215!6.24e-08!3;UBERON:0002303!6.24e-08!3;UBERON:0002319!6.24e-08!3;UBERON:0009569!8.14e-08!113;UBERON:0006853!1.39e-07!3;UBERON:0007685!1.39e-07!3;UBERON:0004134!1.39e-07!3 | |ontology_enrichment_uberon=UBERON:0004211!2.34e-24!16;UBERON:0001285!2.34e-24!16;UBERON:0007684!2.34e-24!16;UBERON:0003220!2.34e-24!16;UBERON:0004208!2.34e-24!16;UBERON:0006555!7.87e-23!17;UBERON:0005103!7.87e-23!17;UBERON:0000083!7.87e-23!17;UBERON:0009201!7.87e-23!17;UBERON:0004819!7.87e-23!17;UBERON:0006553!7.87e-23!17;UBERON:0003074!7.87e-23!17;UBERON:0003060!7.87e-23!17;UBERON:0000080!1.79e-21!18;UBERON:0002120!1.79e-21!18;UBERON:0004875!1.79e-21!18;UBERON:0005721!1.79e-21!18;UBERON:0005754!1.79e-21!18;UBERON:0007297!1.79e-21!18;UBERON:0009773!4.62e-20!12;UBERON:0001231!4.62e-20!12;UBERON:0004810!4.62e-20!12;UBERON:0004876!3.65e-19!20;UBERON:0001851!3.79e-19!16;UBERON:0001225!2.90e-18!13;UBERON:0008987!2.90e-18!13;UBERON:0003887!3.56e-18!21;UBERON:0002113!6.55e-17!27;UBERON:0003918!6.55e-17!27;UBERON:0005095!6.55e-17!27;UBERON:0007687!6.55e-17!27;UBERON:0005172!7.16e-15!55;UBERON:0005173!7.16e-15!55;UBERON:0003064!2.15e-14!37;UBERON:0000058!2.27e-14!26;UBERON:0000489!5.71e-14!32;UBERON:0000353!9.59e-14!17;UBERON:0002417!4.13e-13!61;UBERON:0000916!4.13e-13!61;UBERON:0003886!1.59e-12!63;UBERON:0000074!4.98e-12!7;UBERON:0001229!4.98e-12!7;UBERON:0001230!4.98e-12!7;UBERON:0005749!4.98e-12!7;UBERON:0004199!4.98e-12!7;UBERON:0004209!4.98e-12!7;UBERON:0004198!4.98e-12!7;UBERON:0006554!1.21e-11!44;UBERON:0001008!2.46e-11!45;UBERON:0001242!2.56e-11!4;UBERON:0001262!2.56e-11!4;UBERON:0004786!2.56e-11!4;UBERON:0004808!2.56e-11!4;UBERON:0001277!2.56e-11!4;UBERON:0002553!5.64e-11!70;UBERON:0003350!3.76e-09!5;UBERON:0000466!8.69e-09!126;UBERON:0000464!9.82e-09!104;UBERON:0005177!1.93e-08!107;UBERON:0003567!6.24e-08!3;UBERON:0003838!6.24e-08!3;UBERON:0005169!6.24e-08!3;UBERON:0002321!6.24e-08!3;UBERON:0005215!6.24e-08!3;UBERON:0002303!6.24e-08!3;UBERON:0002319!6.24e-08!3;UBERON:0009569!8.14e-08!113;UBERON:0006853!1.39e-07!3;UBERON:0007685!1.39e-07!3;UBERON:0004134!1.39e-07!3 | ||
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|short_description=p7@LRRN4 | |short_description=p7@LRRN4 | ||
}} | }} |
Revision as of 19:13, 20 November 2012
Short description: | p7@LRRN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LRRN4_5end |
Coexpression cluster: | C548_Mesothelial_mesenchymal_rhabdomyosarcoma_Renal_mesothelioma_Hepatic_clear |
Association with transcript: | 90bp_to_NM_152611, uc002wmo.2, uc002wmp.2_5end |
EntrezGene: | LRRN4 |
HGNC: | 16208 |
UniProt: | Q8WUT4Q6ZMD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.77e-42 | 15 |
kidney cell | 2.84e-37 | 17 |
kidney epithelial cell | 2.84e-37 | 17 |
kidney tubule cell | 4.69e-33 | 10 |
nephron tubule epithelial cell | 4.69e-33 | 10 |
glomerular cell | 3.83e-30 | 7 |
kidney corpuscule cell | 3.83e-30 | 7 |
mesangial cell | 1.83e-27 | 2 |
kidney interstitial cell | 1.83e-27 | 2 |
juxtaglomerular complex cell | 1.83e-27 | 2 |
renal interstitial pericyte | 1.83e-27 | 2 |
extraglomerular mesangial cell | 1.83e-27 | 2 |
kidney cortical cell | 3.45e-27 | 12 |
renal cortical epithelial cell | 3.45e-27 | 12 |
mesothelial cell | 1.55e-17 | 19 |
pericyte cell | 2.95e-14 | 4 |
glomerular endothelial cell | 2.54e-11 | 5 |
lining cell | 1.22e-10 | 58 |
barrier cell | 1.22e-10 | 58 |
cortical cell of adrenal gland | 6.15e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.