FFCP PHASE1:Hg19::chr10:64003300..64003325,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:64003300..64003325,+|id=chr10:64003300..64003325,+|ontology_enrichment_celltype=CL:0002057!4.30e-30!42;CL:0002194!1.34e-29!63;CL:0000576!1.34e-29!63;CL:0000040!1.34e-29!63;CL:0000559!1.34e-29!63;CL:0000766!1.95e-28!76;CL:0002009!5.63e-28!65;CL:0000860!8.31e-27!45;CL:0000839!3.19e-25!70;CL:0000557!1.51e-24!71;CL:0000048!3.18e-19!430;CL:0000723!1.65e-18!436;CL:0000034!4.12e-17!444;CL:0002320!1.67e-15!365;CL:0000134!6.26e-15!358;CL:0000144!7.82e-14!625;CL:0002087!1.95e-13!119;CL:0000738!3.85e-13!140;CL:0000763!6.03e-13!112;CL:0000049!6.03e-13!112;CL:0002371!1.83e-12!591;CL:0000219!1.86e-11!390;CL:0002031!1.48e-10!124;CL:0000548!8.34e-10!679;CL:0000004!8.34e-10!679;CL:0000255!8.34e-10!679;CL:0000012!1.90e-09!682;CL:0000003!1.11e-08!722;CL:0000037!2.71e-07!172;CL:0000566!2.71e-07!172|ontology_enrichment_celltype_v019=CL:0000860;3.59e-54;33!CL:0002057;3.59e-54;33!CL:0000473;2.95e-46;39!CL:0000234;2.95e-46;39!CL:0000576;2.13e-34;48!CL:0000766;2.27e-25;69!CL:0000763;7.60e-10;100!CL:0002087;9.76e-09;104!CL:0000738;8.18e-08;136!CL:0002622;3.95e-07;3!CL:0002619;5.27e-07;3!CL:0002504;5.80e-07;3!CL:1000279;5.80e-07;3!CL:1000280;5.80e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,3.56e-58,59;CL:0000576,3.56e-58,59;CL:0000040,3.56e-58,59;CL:0000559,3.56e-58,59;CL:0002009,7.12e-56,61;CL:0000473,5.54e-55,48;CL:0000234,5.54e-55,48;CL:0000860,3.22e-54,42;CL:0002057,3.22e-54,42;CL:0000766,8.11e-53,72;CL:0000839,1.00e-50,66;CL:0000557,8.69e-50,67;CL:0000763,6.93e-31,108;CL:0000049,6.93e-31,108;CL:0002087,1.17e-26,115;CL:0000738,2.55e-24,136;CL:0002031,1.94e-22,120;CL:0000037,3.21e-17,168;CL:0002032,1.43e-16,161;CL:0000837,1.43e-16,161;CL:0000048,5.55e-16,427;CL:0000988,1.06e-15,177;CL:0000723,1.75e-15,433;CL:0000034,7.66e-15,441;CL:0000134,3.50e-14,354;CL:0002320,1.45e-13,361;CL:0000219,2.07e-11,386;CL:0002622,3.96e-07,3;CL:0002504,4.23e-07,3;CL:1000279,4.23e-07,3;CL:1000280,4.23e-07,3;CL:0002619,5.01e-07,3|ontology_enrichment_development_v019=CL:0002057;3.73e-41;42!CL:0000049;3.15e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!2.06e-25!167;UBERON:0002371!1.92e-24!80;UBERON:0004765!2.66e-23!101;UBERON:0001434!2.66e-23!101;UBERON:0001474!2.16e-22!86;UBERON:0002390!1.47e-20!102;UBERON:0003061!1.47e-20!102;UBERON:0002193!2.20e-19!112;UBERON:0002405!4.98e-19!115;UBERON:0002384!3.65e-15!375;UBERON:0003081!3.51e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-49,76;UBERON:0001474,1.20e-44,82;UBERON:0004765,1.59e-39,90;UBERON:0002390,8.36e-39,98;UBERON:0003061,8.36e-39,98;UBERON:0001434,3.69e-38,100;UBERON:0002405,7.88e-38,93;UBERON:0002193,5.76e-34,108;UBERON:0002204,1.00e-30,167;UBERON:0003081,5.36e-18,203;UBERON:0000926,2.29e-17,315;UBERON:0004120,2.29e-17,315;UBERON:0006603,2.29e-17,315;UBERON:0002384,2.35e-13,371;UBERON:0000923,3.00e-07,560;UBERON:0010316,3.00e-07,560;UBERON:0005291,3.00e-07,560;UBERON:0006598,3.00e-07,560;UBERON:0010317,3.00e-07,560;UBERON:0002532,3.00e-07,560;UBERON:0002050,4.59e-07,564|phase1_expression=0.54503513781167,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,2.01697543935533,0.602694528023977,0,0,0,0,0,0,0,0,0.305653622991805,0.410502947249729,0.472264687882075,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0,0.284338464974843,0,3.87796785972314,2.20598892217156,1.30206522429511,1.34349284543955,2.59114932815184,2.31818010870768,0.872389432677388,1.13362783106643,0.727752183563449,14.6430293250581,13.1573724166984,23.2279778171328,21.8646218164834,14.0888388591005,33.5804766441791,17.5820297175675,15.4916324060118,13.5426486594342,6.77672422353377,13.3724013528344,13.7081325511502,10.7129362329816,16.3673803808808,5.75403413219137,3.62836430205388,6.98122801675712,2.55734850319616,13.6398342155434,9.64554881974938,13.0792672289071,16.5824119069451,18.251902144707,22.1532621599219,13.9241885605675,33.5132648748684,24.3676038329481,0.633765858935825,0.212604299965044,0.209658645508376,2.80821577866238,0.600707571366025,1.12507910687956,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0.294605907474837,0,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0.679856056185397,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.511450247374121,0.361439152384566,2.50668955317945,0.289693037921647,0,0,0.378139268656271,0.665188192387692,0.351339142772504,0,0,0,2.92092654289215,1.91542711029194,0.930705723632056,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0.496971951695318,0.25326102332916,8.474187572046,1.72101972449288,0,0,0,0.98667019366864,2.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:64003300..64003325,+ | |||
|id=chr10:64003300..64003325,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.30e-30!42;CL:0002194!1.34e-29!63;CL:0000576!1.34e-29!63;CL:0000040!1.34e-29!63;CL:0000559!1.34e-29!63;CL:0000766!1.95e-28!76;CL:0002009!5.63e-28!65;CL:0000860!8.31e-27!45;CL:0000839!3.19e-25!70;CL:0000557!1.51e-24!71;CL:0000048!3.18e-19!430;CL:0000723!1.65e-18!436;CL:0000034!4.12e-17!444;CL:0002320!1.67e-15!365;CL:0000134!6.26e-15!358;CL:0000144!7.82e-14!625;CL:0002087!1.95e-13!119;CL:0000738!3.85e-13!140;CL:0000763!6.03e-13!112;CL:0000049!6.03e-13!112;CL:0002371!1.83e-12!591;CL:0000219!1.86e-11!390;CL:0002031!1.48e-10!124;CL:0000548!8.34e-10!679;CL:0000004!8.34e-10!679;CL:0000255!8.34e-10!679;CL:0000012!1.90e-09!682;CL:0000003!1.11e-08!722;CL:0000037!2.71e-07!172;CL:0000566!2.71e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-54;33!CL:0002057;3.59e-54;33!CL:0000473;2.95e-46;39!CL:0000234;2.95e-46;39!CL:0000576;2.13e-34;48!CL:0000766;2.27e-25;69!CL:0000763;7.60e-10;100!CL:0002087;9.76e-09;104!CL:0000738;8.18e-08;136!CL:0002622;3.95e-07;3!CL:0002619;5.27e-07;3!CL:0002504;5.80e-07;3!CL:1000279;5.80e-07;3!CL:1000280;5.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.56e-58,59;CL:0000576,3.56e-58,59;CL:0000040,3.56e-58,59;CL:0000559,3.56e-58,59;CL:0002009,7.12e-56,61;CL:0000473,5.54e-55,48;CL:0000234,5.54e-55,48;CL:0000860,3.22e-54,42;CL:0002057,3.22e-54,42;CL:0000766,8.11e-53,72;CL:0000839,1.00e-50,66;CL:0000557,8.69e-50,67;CL:0000763,6.93e-31,108;CL:0000049,6.93e-31,108;CL:0002087,1.17e-26,115;CL:0000738,2.55e-24,136;CL:0002031,1.94e-22,120;CL:0000037,3.21e-17,168;CL:0002032,1.43e-16,161;CL:0000837,1.43e-16,161;CL:0000048,5.55e-16,427;CL:0000988,1.06e-15,177;CL:0000723,1.75e-15,433;CL:0000034,7.66e-15,441;CL:0000134,3.50e-14,354;CL:0002320,1.45e-13,361;CL:0000219,2.07e-11,386;CL:0002622,3.96e-07,3;CL:0002504,4.23e-07,3;CL:1000279,4.23e-07,3;CL:1000280,4.23e-07,3;CL:0002619,5.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.73e-41;42!CL:0000049;3.15e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.06e-25!167;UBERON:0002371!1.92e-24!80;UBERON:0004765!2.66e-23!101;UBERON:0001434!2.66e-23!101;UBERON:0001474!2.16e-22!86;UBERON:0002390!1.47e-20!102;UBERON:0003061!1.47e-20!102;UBERON:0002193!2.20e-19!112;UBERON:0002405!4.98e-19!115;UBERON:0002384!3.65e-15!375;UBERON:0003081!3.51e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-49,76;UBERON:0001474,1.20e-44,82;UBERON:0004765,1.59e-39,90;UBERON:0002390,8.36e-39,98;UBERON:0003061,8.36e-39,98;UBERON:0001434,3.69e-38,100;UBERON:0002405,7.88e-38,93;UBERON:0002193,5.76e-34,108;UBERON:0002204,1.00e-30,167;UBERON:0003081,5.36e-18,203;UBERON:0000926,2.29e-17,315;UBERON:0004120,2.29e-17,315;UBERON:0006603,2.29e-17,315;UBERON:0002384,2.35e-13,371;UBERON:0000923,3.00e-07,560;UBERON:0010316,3.00e-07,560;UBERON:0005291,3.00e-07,560;UBERON:0006598,3.00e-07,560;UBERON:0010317,3.00e-07,560;UBERON:0002532,3.00e-07,560;UBERON:0002050,4.59e-07,564 | |||
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| |||
|short_description=p@chr10:64003300..64003325,+ | |||
}} |
Revision as of 13:54, 10 September 2013
Short description: | p@chr10:64003300..64003325, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:64003300..64003325, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.40e-49 | 76 |
bone element | 1.20e-44 | 82 |
skeletal element | 1.59e-39 | 90 |
hematopoietic system | 8.36e-39 | 98 |
blood island | 8.36e-39 | 98 |
skeletal system | 3.69e-38 | 100 |
immune system | 7.88e-38 | 93 |
hemolymphoid system | 5.76e-34 | 108 |
musculoskeletal system | 1.00e-30 | 167 |
lateral plate mesoderm | 5.36e-18 | 203 |
mesoderm | 2.29e-17 | 315 |
mesoderm-derived structure | 2.29e-17 | 315 |
presumptive mesoderm | 2.29e-17 | 315 |
connective tissue | 2.35e-13 | 371 |
germ layer | 3.00e-07 | 560 |
germ layer / neural crest | 3.00e-07 | 560 |
embryonic tissue | 3.00e-07 | 560 |
presumptive structure | 3.00e-07 | 560 |
germ layer / neural crest derived structure | 3.00e-07 | 560 |
epiblast (generic) | 3.00e-07 | 560 |
embryonic structure | 4.59e-07 | 564 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.