FFCP PHASE1:Hg19::chr13:108922429..108922446,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10673|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11929|TSSclassifier=S|UniProt=|association_with_transcript=-128bp_to_ENST00000479435_5end|coexpression_cluster_id=C1186|description=CAGE_peak_6_at_TNFSF13B_5end|id=chr13:108922429..108922446,+|ontology_enrichment_celltype=CL:0000763!3.53e-57!112;CL:0000049!3.53e-57!112;CL:0000037!4.53e-52!172;CL:0000566!4.53e-52!172;CL:0002032!3.49e-49!165;CL:0000837!3.49e-49!165;CL:0000766!2.04e-48!76;CL:0000988!7.74e-48!182;CL:0002194!1.51e-45!63;CL:0000576!1.51e-45!63;CL:0000040!1.51e-45!63;CL:0000559!1.51e-45!63;CL:0002009!2.88e-45!65;CL:0000738!2.99e-42!140;CL:0002057!4.30e-42!42;CL:0000557!2.29e-41!71;CL:0000839!1.09e-38!70;CL:0000860!4.83e-38!45;CL:0002087!4.78e-36!119;CL:0002031!5.30e-31!124;CL:0000094!3.24e-09!8;CL:0000134!5.49e-09!358;CL:0002393!9.22e-09!9;CL:0002397!9.22e-09!9;CL:0002320!1.51e-08!365;CL:0000990!7.71e-07!8|ontology_enrichment_celltype_v019=CL:0000860;2.72e-57;33!CL:0002057;2.72e-57;33!CL:0000473;6.87e-56;39!CL:0000234;6.87e-56;39!CL:0000576;3.94e-45;48!CL:0000766;9.47e-34;69!CL:0000763;2.68e-27;100!CL:0000738;7.11e-15;136!CL:0002087;2.01e-13;104!CL:0000988;5.02e-13;177!CL:0002393;3.97e-11;6!CL:0002397;3.97e-11;6!CL:0000235;4.20e-11;6!CL:0000094;6.36e-10;8!CL:0000990;4.94e-09;8!CL:0000775;6.43e-08;3!CL:0000451;3.37e-07;10!CL:0000081;6.11e-07;11!CL:0000219;8.28e-07;193|ontology_enrichment_celltype_v019_2=CL:0000763,1.04e-96,108;CL:0000049,1.04e-96,108;CL:0000473,9.80e-84,48;CL:0000234,9.80e-84,48;CL:0000766,3.22e-81,72;CL:0002194,2.80e-79,59;CL:0000576,2.80e-79,59;CL:0000040,2.80e-79,59;CL:0000559,2.80e-79,59;CL:0002009,3.51e-79,61;CL:0000557,6.34e-74,67;CL:0000860,1.07e-73,42;CL:0002057,1.07e-73,42;CL:0000037,2.12e-73,168;CL:0002032,1.60e-69,161;CL:0000837,1.60e-69,161;CL:0000839,2.71e-69,66;CL:0000988,1.56e-68,177;CL:0000738,6.52e-57,136;CL:0002087,9.82e-49,115;CL:0002031,1.51e-42,120;CL:0000134,4.74e-23,354;CL:0002320,3.59e-22,361;CL:0000219,4.41e-19,386;CL:0000034,1.17e-17,441;CL:0000048,9.63e-17,427;CL:0000723,3.36e-16,433;CL:0002393,4.02e-12,9;CL:0002397,4.02e-12,9;CL:0000235,5.29e-11,6;CL:0000094,7.27e-10,8;CL:0000990,2.70e-09,8;CL:0000775,6.44e-08,3;CL:0000451,2.09e-07,10;CL:0000081,6.70e-07,11|ontology_enrichment_development_v019=CL:0002057;7.23e-53;42!CL:0000049;1.34e-27;108|ontology_enrichment_disease=DOID:8692!1.72e-08!31|ontology_enrichment_disease_v019=DOID:8692;1.16e-10;31|ontology_enrichment_disease_v019_2=DOID:8692,9.13e-11,31;DOID:1240,8.47e-08,39|ontology_enrichment_uberon=UBERON:0002390!4.16e-44!102;UBERON:0003061!4.16e-44!102;UBERON:0002193!4.17e-40!112;UBERON:0002371!1.04e-35!80;UBERON:0001474!1.39e-31!86;UBERON:0004765!2.19e-25!101;UBERON:0001434!2.19e-25!101;UBERON:0002405!6.13e-25!115;UBERON:0003081!5.05e-13!216;UBERON:0007023!6.62e-11!115;UBERON:0002204!1.14e-10!167;UBERON:0002384!3.61e-08!375;UBERON:0000178!1.64e-07!15;UBERON:0000179!1.64e-07!15;UBERON:0000463!1.64e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.68e-08;15!UBERON:0000179;2.68e-08;15!UBERON:0000463;2.68e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.56e-67,98;UBERON:0003061,3.56e-67,98;UBERON:0002371,4.14e-66,76;UBERON:0002193,2.10e-61,108;UBERON:0001474,4.15e-60,82;UBERON:0004765,2.39e-53,90;UBERON:0002405,3.32e-53,93;UBERON:0001434,2.05e-46,100;UBERON:0003081,2.59e-25,203;UBERON:0002204,1.11e-23,167;UBERON:0002384,5.66e-21,371;UBERON:0000926,2.89e-10,315;UBERON:0004120,2.89e-10,315;UBERON:0006603,2.89e-10,315;UBERON:0000178,2.57e-08,15;UBERON:0000179,2.57e-08,15;UBERON:0000463,2.57e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,2.8272960126742,3.36612416744778,3.30585281517453,0.786728553697808,0.767658796194425,2.16742572642506,0,0,0,0,0,3.52320527201817,2.21598163412751,2.80762226458198,3.47217393145363,1.56740831967947,0.971680998056939,1.03030227053675,5.67053131240302,4.91238726795452,2.66842467306598,6.27558399645349,2.46700732813095,3.09706370895104,12.0830804775303,8.45330331546032,9.69577142543199,6.89491361473237,7.74581620300591,2.70852973188684,4.70605848856512,1.63743690034707,2.02251136000576,8.57034898638527,8.02322567690234,1.27867425159808,18.8015241106428,8.97586459297343,11.9342930149154,7.83564944297177,7.37600792098482,4.35975574296902,9.79869794501299,9.90817544998383,8.90474263290978,19.9781835869012,8.83866326370155,9.49387162322653,2.74631872205524,1.91343869968539,3.35453832813401,3.48218756554135,2.55300717830561,5.30394436100364,0.570025487482497,1.39241674039363,1.0959849225878,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,3.96513985737078,2.24203425192614,1.31692042387539,0.196709770113833,0,1.02800749499755,0.167186495390678,0,0,1.94826728407911,0.111410456885174,0.294605907474837,0.221533894583621,1.89562704635511,0.128091319725675,1.1705341280389,0.328875809207352,1.10540007114339,0,0,0,0,0.453237370790265,0,0,0.506039384039006,0.318565414324097,0,0,0.903450714466637,0.511946444617674,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10673 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11929 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-128bp_to_ENST00000479435_5end | |||
|coexpression_cluster_id=C1186 | |||
|description=CAGE_peak_6_at_TNFSF13B_5end | |||
|id=chr13:108922429..108922446,+ | |||
|ontology_enrichment_celltype=CL:0000763!3.53e-57!112;CL:0000049!3.53e-57!112;CL:0000037!4.53e-52!172;CL:0000566!4.53e-52!172;CL:0002032!3.49e-49!165;CL:0000837!3.49e-49!165;CL:0000766!2.04e-48!76;CL:0000988!7.74e-48!182;CL:0002194!1.51e-45!63;CL:0000576!1.51e-45!63;CL:0000040!1.51e-45!63;CL:0000559!1.51e-45!63;CL:0002009!2.88e-45!65;CL:0000738!2.99e-42!140;CL:0002057!4.30e-42!42;CL:0000557!2.29e-41!71;CL:0000839!1.09e-38!70;CL:0000860!4.83e-38!45;CL:0002087!4.78e-36!119;CL:0002031!5.30e-31!124;CL:0000094!3.24e-09!8;CL:0000134!5.49e-09!358;CL:0002393!9.22e-09!9;CL:0002397!9.22e-09!9;CL:0002320!1.51e-08!365;CL:0000990!7.71e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-57;33!CL:0002057;2.72e-57;33!CL:0000473;6.87e-56;39!CL:0000234;6.87e-56;39!CL:0000576;3.94e-45;48!CL:0000766;9.47e-34;69!CL:0000763;2.68e-27;100!CL:0000738;7.11e-15;136!CL:0002087;2.01e-13;104!CL:0000988;5.02e-13;177!CL:0002393;3.97e-11;6!CL:0002397;3.97e-11;6!CL:0000235;4.20e-11;6!CL:0000094;6.36e-10;8!CL:0000990;4.94e-09;8!CL:0000775;6.43e-08;3!CL:0000451;3.37e-07;10!CL:0000081;6.11e-07;11!CL:0000219;8.28e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.04e-96,108;CL:0000049,1.04e-96,108;CL:0000473,9.80e-84,48;CL:0000234,9.80e-84,48;CL:0000766,3.22e-81,72;CL:0002194,2.80e-79,59;CL:0000576,2.80e-79,59;CL:0000040,2.80e-79,59;CL:0000559,2.80e-79,59;CL:0002009,3.51e-79,61;CL:0000557,6.34e-74,67;CL:0000860,1.07e-73,42;CL:0002057,1.07e-73,42;CL:0000037,2.12e-73,168;CL:0002032,1.60e-69,161;CL:0000837,1.60e-69,161;CL:0000839,2.71e-69,66;CL:0000988,1.56e-68,177;CL:0000738,6.52e-57,136;CL:0002087,9.82e-49,115;CL:0002031,1.51e-42,120;CL:0000134,4.74e-23,354;CL:0002320,3.59e-22,361;CL:0000219,4.41e-19,386;CL:0000034,1.17e-17,441;CL:0000048,9.63e-17,427;CL:0000723,3.36e-16,433;CL:0002393,4.02e-12,9;CL:0002397,4.02e-12,9;CL:0000235,5.29e-11,6;CL:0000094,7.27e-10,8;CL:0000990,2.70e-09,8;CL:0000775,6.44e-08,3;CL:0000451,2.09e-07,10;CL:0000081,6.70e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;7.23e-53;42!CL:0000049;1.34e-27;108 | |||
|ontology_enrichment_disease=DOID:8692!1.72e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.16e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,9.13e-11,31;DOID:1240,8.47e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.16e-44!102;UBERON:0003061!4.16e-44!102;UBERON:0002193!4.17e-40!112;UBERON:0002371!1.04e-35!80;UBERON:0001474!1.39e-31!86;UBERON:0004765!2.19e-25!101;UBERON:0001434!2.19e-25!101;UBERON:0002405!6.13e-25!115;UBERON:0003081!5.05e-13!216;UBERON:0007023!6.62e-11!115;UBERON:0002204!1.14e-10!167;UBERON:0002384!3.61e-08!375;UBERON:0000178!1.64e-07!15;UBERON:0000179!1.64e-07!15;UBERON:0000463!1.64e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.68e-08;15!UBERON:0000179;2.68e-08;15!UBERON:0000463;2.68e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.56e-67,98;UBERON:0003061,3.56e-67,98;UBERON:0002371,4.14e-66,76;UBERON:0002193,2.10e-61,108;UBERON:0001474,4.15e-60,82;UBERON:0004765,2.39e-53,90;UBERON:0002405,3.32e-53,93;UBERON:0001434,2.05e-46,100;UBERON:0003081,2.59e-25,203;UBERON:0002204,1.11e-23,167;UBERON:0002384,5.66e-21,371;UBERON:0000926,2.89e-10,315;UBERON:0004120,2.89e-10,315;UBERON:0006603,2.89e-10,315;UBERON:0000178,2.57e-08,15;UBERON:0000179,2.57e-08,15;UBERON:0000463,2.57e-08,15 | |||
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| |||
|short_description=p6@TNFSF13B | |||
}} |
Revision as of 01:24, 11 September 2013
Short description: | p6@TNFSF13B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TNFSF13B_5end |
Coexpression cluster: | C1186_acute_Neutrophils_CD14_Eosinophils_Whole_Smooth_granulocyte |
Association with transcript: | -128bp_to_ENST00000479435_5end |
EntrezGene: | TNFSF13B |
HGNC: | 11929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.56e-67 | 98 |
blood island | 3.56e-67 | 98 |
bone marrow | 4.14e-66 | 76 |
hemolymphoid system | 2.10e-61 | 108 |
bone element | 4.15e-60 | 82 |
skeletal element | 2.39e-53 | 90 |
immune system | 3.32e-53 | 93 |
skeletal system | 2.05e-46 | 100 |
lateral plate mesoderm | 2.59e-25 | 203 |
musculoskeletal system | 1.11e-23 | 167 |
connective tissue | 5.66e-21 | 371 |
mesoderm | 2.89e-10 | 315 |
mesoderm-derived structure | 2.89e-10 | 315 |
presumptive mesoderm | 2.89e-10 | 315 |
blood | 2.57e-08 | 15 |
haemolymphatic fluid | 2.57e-08 | 15 |
organism substance | 2.57e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.13e-11 | 31 |
leukemia | 8.47e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.