FFCP PHASE1:Hg19::chr14:68283291..68283323,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23503|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20761|TSSclassifier=W|UniProt=Q68DK2,G3V230,G3V2D8|association_with_transcript=0bp_to_ENST00000347230,ENST00000411699,ENST00000553399,ENST00000554523,ENST00000554557,ENST00000555452,ENST00000557366,ENST00000557407,NM_015346,uc001xka.2,uc001xkc.3,uc010tsz.1,uc010tta.1_5end|description=CAGE_peak_1_at_ZFYVE26_5end|id=chr14:68283291..68283323,-|ontology_enrichment_celltype=CL:0002009!5.12e-21!65;CL:0000557!4.26e-20!71;CL:0002194!7.10e-20!63;CL:0000576!7.10e-20!63;CL:0000040!7.10e-20!63;CL:0000559!7.10e-20!63;CL:0000839!1.81e-19!70;CL:0002031!2.32e-19!124;CL:0000738!3.61e-19!140;CL:0002087!1.05e-18!119;CL:0002057!2.87e-17!42;CL:0000860!4.90e-17!45;CL:0000766!1.81e-15!76;CL:0000988!1.42e-12!182;CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0002032!1.72e-11!165;CL:0000837!1.72e-11!165;CL:0000763!5.61e-10!112;CL:0000049!5.61e-10!112;CL:0000451!4.71e-08!10;CL:0000990!7.30e-07!8|ontology_enrichment_celltype_v019=CL:0000473;3.47e-17;39!CL:0000234;3.47e-17;39!CL:0000860;1.70e-16;33!CL:0002057;1.70e-16;33!CL:0000576;5.24e-11;48!CL:0000451;4.47e-08;10!CL:0000766;3.66e-07;69!CL:0000990;6.93e-07;8|ontology_enrichment_celltype_v019_2=CL:0002009,1.08e-21,61;CL:0000473,4.17e-21,48;CL:0000234,4.17e-21,48;CL:0000557,1.20e-20,67;CL:0002194,1.57e-20,59;CL:0000576,1.57e-20,59;CL:0000040,1.57e-20,59;CL:0000559,1.57e-20,59;CL:0000839,5.25e-20,66;CL:0002031,1.60e-19,120;CL:0000738,2.82e-19,136;CL:0002087,7.11e-19,115;CL:0000860,2.87e-17,42;CL:0002057,2.87e-17,42;CL:0000766,8.69e-16,72;CL:0000037,1.70e-12,168;CL:0000988,2.24e-12,177;CL:0002032,1.83e-11,161;CL:0000837,1.83e-11,161;CL:0000763,5.27e-10,108;CL:0000049,5.27e-10,108;CL:0000451,4.71e-08,10;CL:0000990,7.30e-07,8|ontology_enrichment_development_v019=CL:0002057;4.43e-13;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.03e-20!112;UBERON:0002390!1.13e-18!102;UBERON:0003061!1.13e-18!102;UBERON:0002371!1.15e-16!80;UBERON:0001474!1.93e-15!86;UBERON:0002405!1.87e-14!115;UBERON:0007023!2.75e-12!115;UBERON:0004765!5.51e-11!101;UBERON:0001434!5.51e-11!101;UBERON:0001049!1.36e-08!57;UBERON:0005068!1.36e-08!57;UBERON:0006241!1.36e-08!57;UBERON:0007135!1.36e-08!57;UBERON:0002616!8.76e-08!59;UBERON:0001017!2.82e-07!82;UBERON:0005743!2.83e-07!86;UBERON:0000073!6.34e-07!94;UBERON:0001016!6.34e-07!94;UBERON:0003081!9.29e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.38e-20,108;UBERON:0002390,6.39e-19,98;UBERON:0003061,6.39e-19,98;UBERON:0002405,7.81e-19,93;UBERON:0002371,5.37e-17,76;UBERON:0001474,1.09e-15,82;UBERON:0004765,4.35e-12,90;UBERON:0007023,5.36e-12,114;UBERON:0001434,1.09e-09,100;UBERON:0001049,1.23e-08,56;UBERON:0005068,1.23e-08,56;UBERON:0006241,1.23e-08,56;UBERON:0007135,1.23e-08,56;UBERON:0000073,5.94e-08,53;UBERON:0002616,5.94e-08,53;UBERON:0001017,2.76e-07,81;UBERON:0001016,6.58e-07,89|phase1_expression=9.6289541013395,10.9191267184401,16.3507108751327,11.0080628188443,12.5149106439641,4.36169262050184,0,5.05375898741465,15.6711376919903,8.10921990454979,9.07141518364156,19.4412821195853,20.5738243018194,12.9954670608049,7.62213964174206,8.0679017574213,7.23233433628772,7.30310090387373,6.8310591830671,16.9907060145967,15.7080532258075,12.8516435806016,16.6016872536013,14.0980657825071,14.3118609138075,16.3524688300616,16.0096149427394,18.5757443900283,16.9146639045029,26.4842284687077,14.3978994683951,8.27479102031034,11.4458249135735,10.3531122846701,11.7750144882058,12.3687232264057,9.68881449804996,18.8358438900838,23.8647892489469,18.2289131401316,90.4618515929294,80.3256291727069,67.9999498554253,26.7532759354399,35.1424627630593,25.4713264247207,35.7940716834754,46.0508034584445,51.1015511976921,56.1000165028193,53.2814269580529,50.1342327363801,22.7532149286168,33.565203546359,41.9822108442459,23.7185347823682,32.7487380069415,28.5398825245257,19.2832852193669,30.1673285451528,21.7374622771674,44.8597768253934,52.8578692697324,47.7371720596617,24.3775760448011,24.9649498864101,28.6498234537965,67.0833936235504,59.9705356183232,75.3645291126755,36.9293696606355,32.7767096028933,29.7474644194431,16.4779123323315,17.0083439972035,18.0306435137203,20.6684681309551,19.8233498550788,24.108838004562,12.5405607246149,14.7198341127327,15.7091172237585,10.5597746676794,20.2071286166989,18.6796943311347,20.4830506831923,21.6213832999447,16.0930683187255,13.2208974556972,20.989182599778,22.7685187643779,26.4256735216922,19.1136614062614,17.1822727152734,22.4203425192614,13.4325883235289,23.2117528734323,22.0086027139532,21.1769543969494,21.2326849146161,15.9701910650459,21.7785990637977,25.3274746930285,17.0457999034316,20.6224135232386,17.9442454612733,30.0592288779167,20.2384285166567,22.5002671278589,20.8836138846669,15.1992509782217,26.0822777161547,23.2809904164435,22.7409703876256,24.0431704751447,19.60251628667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8967624422883,17.6332828753828,17.9143149914377,13.2009162338841,13.3924325021289,13.1332300618708,7.57109389371906,5.7785949122191,13.0809370738705,8.35181734288677,8.61482516946635,10.6500338188964,13.4605187478557,14.327107286519,11.7344549921169,13.1570429747224,8.65776815134817,12.1535844110676,9.96760399853129,8.45597011340224,12.4354923023231,14.8891378526917,26.1308444326771,35.4645762087687,30.1603187511334,36.1479521305416,20.3118106284776,16.9583307040066,6.97330007083469,10.1993571886014,11.6293985366614,15.4993481694734,10.7828031177699,11.7827808161178,11.330240125275,6.22077260032973,11.382599046025,13.3702766131885,11.0086159299127,14.1972529649618,22.5744264838854,18.7065929689481,15.6159062966343,10.0556085235184,7.63210441568205,5.12601342508147,9.60684897942564,8.46422264857641,12.8623100488344,22.5444580088573,8.5017945795351,26.1799528853728,13.5376800398898,21.426094178846,19.9172887096948,21.637736514668,25.6984956466478,8.73514694659128,10.2633659312534,27.5142897782519,11.8991436134848,12.2042270549493,6.90359926060101,39.1864957569061,15.5685379682963,11.4971889161006,9.37816813479711,11.2619878627012,13.593069153338,20.5519959841693,19.9235874624264,15.6215619722769,23.9756683941374,22.7028600494186,28.4426900689474,7.12735096914337,24.3143477410754,8.09007724054255,16.2258283102286,10.1783348816874,19.8407396109106,20.0298649398088,33.9216665113433,21.9981878003344,8.75778305423922,9.08886450018318,21.002647489841,20.6526508987346,16.4289438828716,19.7991895367883,15.0706738272987,16.6542525310962,11.4911586958653,21.0026505717184,4.31855182437243,7.6440270061928,28.3761880381326,16.4334156202036,13.2515224919663,5.0418898967748,11.2239591062235,9.11751122317362,14.1696335987978,8.2951159417691,20.220685864553,28.5180121760662,36.6417640464378,18.6290302084009,14.2046258497311,9.92660434125824,6.68877257284203,16.2190376106799,15.0169857431322,7.80274719886524,18.7754362784489,12.7301880501746,20.8766597640876,18.4570177362473,15.440004588499,15.7171112377481,11.7730889869793,10.8428238757402,6.15666893774403,19.3232439765342,16.4380956769922,24.0415516554353,13.1688842981226,17.1603825227734,5.18488403623577,24.7348668564831,24.9518976274752,16.0609176481692,6.45723035813704,18.608815760011,30.2952073475813,20.4879369646104,3.03541695629618,12.7042153817649,22.4675826729671,12.4157186001908,17.8904420527771,23.3643520536866,14.9882984083525,24.2729619981565,27.9264441817842,29.096476228347,11.5318455631693,10.6300394585226,9.51778436672336,8.9578161632906,12.0192129160065,16.9775991355326,14.3804249936194,17.1019139369959,17.0924513134812,10.7804241895721,11.5941408273906,15.8098836792145,14.925049910258,24.3067540275454,17.9116544796824,21.6638632632004,22.6707073524381,21.415776432071,13.1194279219318,13.8750805046399,20.2117188958219,20.9008077981083,10.6092323336437,22.9670500779743,14.0575522569646,14.9697160445706,15.3852177674742,19.2109222579888,7.7228912914776,10.4197234443641,7.03922827210363,29.2157051597051,15.0551585976823,17.9754329030088,22.5426648821949,17.951835568981|short_description=p1@ZFYVE26}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20761 | |||
|TSSclassifier=W | |||
|UniProt=Q68DK2,G3V230,G3V2D8 | |||
|association_with_transcript=0bp_to_ENST00000347230,ENST00000411699,ENST00000553399,ENST00000554523,ENST00000554557,ENST00000555452,ENST00000557366,ENST00000557407,NM_015346,uc001xka.2,uc001xkc.3,uc010tsz.1,uc010tta.1_5end | |||
|description=CAGE_peak_1_at_ZFYVE26_5end | |||
|id=chr14:68283291..68283323,- | |||
|ontology_enrichment_celltype=CL:0002009!5.12e-21!65;CL:0000557!4.26e-20!71;CL:0002194!7.10e-20!63;CL:0000576!7.10e-20!63;CL:0000040!7.10e-20!63;CL:0000559!7.10e-20!63;CL:0000839!1.81e-19!70;CL:0002031!2.32e-19!124;CL:0000738!3.61e-19!140;CL:0002087!1.05e-18!119;CL:0002057!2.87e-17!42;CL:0000860!4.90e-17!45;CL:0000766!1.81e-15!76;CL:0000988!1.42e-12!182;CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0002032!1.72e-11!165;CL:0000837!1.72e-11!165;CL:0000763!5.61e-10!112;CL:0000049!5.61e-10!112;CL:0000451!4.71e-08!10;CL:0000990!7.30e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.47e-17;39!CL:0000234;3.47e-17;39!CL:0000860;1.70e-16;33!CL:0002057;1.70e-16;33!CL:0000576;5.24e-11;48!CL:0000451;4.47e-08;10!CL:0000766;3.66e-07;69!CL:0000990;6.93e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.08e-21,61;CL:0000473,4.17e-21,48;CL:0000234,4.17e-21,48;CL:0000557,1.20e-20,67;CL:0002194,1.57e-20,59;CL:0000576,1.57e-20,59;CL:0000040,1.57e-20,59;CL:0000559,1.57e-20,59;CL:0000839,5.25e-20,66;CL:0002031,1.60e-19,120;CL:0000738,2.82e-19,136;CL:0002087,7.11e-19,115;CL:0000860,2.87e-17,42;CL:0002057,2.87e-17,42;CL:0000766,8.69e-16,72;CL:0000037,1.70e-12,168;CL:0000988,2.24e-12,177;CL:0002032,1.83e-11,161;CL:0000837,1.83e-11,161;CL:0000763,5.27e-10,108;CL:0000049,5.27e-10,108;CL:0000451,4.71e-08,10;CL:0000990,7.30e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.43e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@ZFYVE26 | |||
}} |
Revision as of 05:15, 11 September 2013
Short description: | p1@ZFYVE26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZFYVE26_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347230, ENST00000411699, ENST00000553399, ENST00000554523, ENST00000554557, ENST00000555452, ENST00000557366, ENST00000557407, NM_015346, uc001xka.2, uc001xkc.3, uc010tsz.1, uc010tta.1_5end |
EntrezGene: | ZFYVE26 |
HGNC: | 20761 |
UniProt: | Q68DK2G3V230G3V2D8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.08e-21 | 61 |
defensive cell | 4.17e-21 | 48 |
phagocyte | 4.17e-21 | 48 |
granulocyte monocyte progenitor cell | 1.20e-20 | 67 |
monopoietic cell | 1.57e-20 | 59 |
monocyte | 1.57e-20 | 59 |
monoblast | 1.57e-20 | 59 |
promonocyte | 1.57e-20 | 59 |
myeloid lineage restricted progenitor cell | 5.25e-20 | 66 |
hematopoietic lineage restricted progenitor cell | 1.60e-19 | 120 |
leukocyte | 2.82e-19 | 136 |
nongranular leukocyte | 7.11e-19 | 115 |
classical monocyte | 2.87e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-17 | 42 |
myeloid leukocyte | 8.69e-16 | 72 |
hematopoietic stem cell | 1.70e-12 | 168 |
hematopoietic cell | 2.24e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.83e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-11 | 161 |
myeloid cell | 5.27e-10 | 108 |
common myeloid progenitor | 5.27e-10 | 108 |
dendritic cell | 4.71e-08 | 10 |
conventional dendritic cell | 7.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.38e-20 | 108 |
hematopoietic system | 6.39e-19 | 98 |
blood island | 6.39e-19 | 98 |
immune system | 7.81e-19 | 93 |
bone marrow | 5.37e-17 | 76 |
bone element | 1.09e-15 | 82 |
skeletal element | 4.35e-12 | 90 |
adult organism | 5.36e-12 | 114 |
skeletal system | 1.09e-09 | 100 |
neural tube | 1.23e-08 | 56 |
neural rod | 1.23e-08 | 56 |
future spinal cord | 1.23e-08 | 56 |
neural keel | 1.23e-08 | 56 |
regional part of nervous system | 5.94e-08 | 53 |
regional part of brain | 5.94e-08 | 53 |
central nervous system | 2.76e-07 | 81 |
nervous system | 6.58e-07 | 89 |
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