FFCP PHASE1:Hg19::chr17:80285126..80285138,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6398|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=10707|TSSclassifier=S|UniProt=|association_with_transcript=29bp_to_uc002ken.2_5end|coexpression_cluster_id=C7|description=CAGE_peak_4_at_SECTM1_5end|id=chr17:80285126..80285138,-|ontology_enrichment_celltype=CL:0002057!6.09e-28!42;CL:0000860!2.26e-25!45;CL:0000766!1.74e-22!76;CL:0002194!1.42e-18!63;CL:0000576!1.42e-18!63;CL:0000040!1.42e-18!63;CL:0000559!1.42e-18!63;CL:0002009!1.10e-17!65;CL:0000839!9.73e-17!70;CL:0000557!2.35e-16!71;CL:0000763!4.08e-12!112;CL:0000049!4.08e-12!112;CL:0000738!1.31e-08!140;CL:0002393!1.99e-08!9;CL:0002397!1.99e-08!9;CL:0000094!4.27e-07!8;CL:0002087!4.40e-07!119|ontology_enrichment_celltype_v019=CL:0000860;7.82e-26;33!CL:0002057;7.82e-26;33!CL:0000775;1.26e-24;3!CL:0000576;3.41e-21;48!CL:0000473;4.60e-18;39!CL:0000234;4.60e-18;39!CL:0000094;4.02e-16;8!CL:0000766;6.06e-14;69!CL:0000081;8.77e-12;11!CL:0000763;3.17e-09;100|ontology_enrichment_celltype_v019_2=CL:0000860,2.21e-35,42;CL:0002057,2.21e-35,42;CL:0000766,1.01e-32,72;CL:0000473,1.18e-30,48;CL:0000234,1.18e-30,48;CL:0000775,8.07e-25,3;CL:0002194,4.99e-24,59;CL:0000576,4.99e-24,59;CL:0000040,4.99e-24,59;CL:0000559,4.99e-24,59;CL:0002009,3.58e-23,61;CL:0000839,2.94e-21,66;CL:0000557,6.58e-21,67;CL:0000763,7.20e-21,108;CL:0000049,7.20e-21,108;CL:0000094,3.05e-16,8;CL:0000738,6.03e-16,136;CL:0002032,5.53e-13,161;CL:0000837,5.53e-13,161;CL:0000037,2.60e-12,168;CL:0000081,7.20e-12,11;CL:0000988,1.60e-11,177;CL:0002087,3.26e-11,115;CL:0002031,1.21e-10,120;CL:0002393,1.57e-08,9;CL:0002397,1.57e-08,9;CL:0000134,3.16e-07,354;CL:0002320,5.19e-07,361|ontology_enrichment_development_v019=CL:0002057;2.62e-24;42!CL:0000049;4.00e-09;108!UBERON:0003099;4.32e-09;1!UBERON:0003852;4.32e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.99e-19!102;UBERON:0003061!3.99e-19!102;UBERON:0002193!4.60e-18!112;UBERON:0002371!1.71e-14!80;UBERON:0001474!7.76e-14!86;UBERON:0004765!1.12e-13!101;UBERON:0001434!1.12e-13!101;UBERON:0002405!1.37e-11!115;UBERON:0002204!2.93e-10!167|ontology_enrichment_uberon_v019=UBERON:0005705;4.32e-09;1!UBERON:0008193;4.32e-09;1!UBERON:0010912;4.32e-09;1!UBERON:0002514;4.32e-09;1!UBERON:0003457;4.32e-09;1!UBERON:0008907;4.32e-09;1!UBERON:0008001;4.32e-09;1!UBERON:0007213;4.32e-09;1!UBERON:0009891;4.32e-09;1!UBERON:0007914;4.32e-09;1!UBERON:0007375;4.32e-09;1!UBERON:0003323;4.32e-09;1!UBERON:0010258;4.32e-09;1!UBERON:0005253;4.32e-09;1!UBERON:0007842;4.32e-09;1!UBERON:0002397;4.32e-09;1!UBERON:0003113;4.32e-09;1!UBERON:0003277;4.32e-09;1!UBERON:0001709;4.32e-09;1!UBERON:0002244;4.32e-09;1!UBERON:0005620;4.32e-09;1!UBERON:0010364;4.32e-09;1!UBERON:0004288;4.32e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.12e-19,82;UBERON:0002371,3.59e-18,76;UBERON:0004765,2.65e-17,90;UBERON:0002390,9.10e-16,98;UBERON:0003061,9.10e-16,98;UBERON:0001434,2.54e-15,100;UBERON:0002405,1.98e-14,93;UBERON:0002193,4.52e-14,108;UBERON:0002204,2.13e-09,167;UBERON:0005705,5.28e-09,1;UBERON:0008193,5.28e-09,1;UBERON:0010912,5.28e-09,1;UBERON:0002514,5.28e-09,1;UBERON:0003457,5.28e-09,1;UBERON:0008907,5.28e-09,1;UBERON:0008001,5.28e-09,1;UBERON:0007213,5.28e-09,1;UBERON:0009891,5.28e-09,1;UBERON:0007914,5.28e-09,1;UBERON:0009292,5.28e-09,1;UBERON:0003099,5.28e-09,1;UBERON:0007375,5.28e-09,1;UBERON:0003323,5.28e-09,1;UBERON:0010258,5.28e-09,1;UBERON:0007842,5.28e-09,1;UBERON:0009494,5.28e-09,1;UBERON:0010042,5.28e-09,1;UBERON:0010045,5.28e-09,1;UBERON:0010259,5.28e-09,1;UBERON:0010359,5.28e-09,1;UBERON:0009526,5.28e-09,1;UBERON:0002397,5.28e-09,1;UBERON:0003113,5.28e-09,1;UBERON:0003277,5.28e-09,1;UBERON:0001709,5.28e-09,1;UBERON:0004066,5.28e-09,1;UBERON:0002244,5.28e-09,1;UBERON:0005620,5.28e-09,1;UBERON:0004362,5.28e-09,1;UBERON:0010364,5.28e-09,1;UBERON:0010046,5.28e-09,1;UBERON:0005868,5.28e-09,1;UBERON:0007238,5.28e-09,1;UBERON:0004288,5.28e-09,1;UBERON:0004068,5.28e-09,1;UBERON:0010334,5.28e-09,1;UBERON:0003852,5.28e-09,1;UBERON:0010253,5.28e-09,1|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,1.30592814099919,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0.671746422719773,0,0.257575567634187,0.726991193897824,0,0.242584061187816,1.39457422143411,0,0.309706370895104,6.32923263108731,5.12321413058201,7.09446689665756,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0,2.14258724659632,0.320929027076094,0,11.8746468067218,8.57693727773017,7.2458207590558,0.580418477257168,0,0,7.03496262718881,4.69334626578181,2.6062661364614,0,0.368277635987565,0.316462387440884,2.95757400836718,2.33864729961548,0.838634582033504,0.44931452458598,0.901061357049038,0,0.570025487482497,1.79025009479181,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10707 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=29bp_to_uc002ken.2_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_SECTM1_5end | |||
|id=chr17:80285126..80285138,- | |||
|ontology_enrichment_celltype=CL:0002057!6.09e-28!42;CL:0000860!2.26e-25!45;CL:0000766!1.74e-22!76;CL:0002194!1.42e-18!63;CL:0000576!1.42e-18!63;CL:0000040!1.42e-18!63;CL:0000559!1.42e-18!63;CL:0002009!1.10e-17!65;CL:0000839!9.73e-17!70;CL:0000557!2.35e-16!71;CL:0000763!4.08e-12!112;CL:0000049!4.08e-12!112;CL:0000738!1.31e-08!140;CL:0002393!1.99e-08!9;CL:0002397!1.99e-08!9;CL:0000094!4.27e-07!8;CL:0002087!4.40e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.82e-26;33!CL:0002057;7.82e-26;33!CL:0000775;1.26e-24;3!CL:0000576;3.41e-21;48!CL:0000473;4.60e-18;39!CL:0000234;4.60e-18;39!CL:0000094;4.02e-16;8!CL:0000766;6.06e-14;69!CL:0000081;8.77e-12;11!CL:0000763;3.17e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.21e-35,42;CL:0002057,2.21e-35,42;CL:0000766,1.01e-32,72;CL:0000473,1.18e-30,48;CL:0000234,1.18e-30,48;CL:0000775,8.07e-25,3;CL:0002194,4.99e-24,59;CL:0000576,4.99e-24,59;CL:0000040,4.99e-24,59;CL:0000559,4.99e-24,59;CL:0002009,3.58e-23,61;CL:0000839,2.94e-21,66;CL:0000557,6.58e-21,67;CL:0000763,7.20e-21,108;CL:0000049,7.20e-21,108;CL:0000094,3.05e-16,8;CL:0000738,6.03e-16,136;CL:0002032,5.53e-13,161;CL:0000837,5.53e-13,161;CL:0000037,2.60e-12,168;CL:0000081,7.20e-12,11;CL:0000988,1.60e-11,177;CL:0002087,3.26e-11,115;CL:0002031,1.21e-10,120;CL:0002393,1.57e-08,9;CL:0002397,1.57e-08,9;CL:0000134,3.16e-07,354;CL:0002320,5.19e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-24;42!CL:0000049;4.00e-09;108!UBERON:0003099;4.32e-09;1!UBERON:0003852;4.32e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-19!102;UBERON:0003061!3.99e-19!102;UBERON:0002193!4.60e-18!112;UBERON:0002371!1.71e-14!80;UBERON:0001474!7.76e-14!86;UBERON:0004765!1.12e-13!101;UBERON:0001434!1.12e-13!101;UBERON:0002405!1.37e-11!115;UBERON:0002204!2.93e-10!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005705;4.32e-09;1!UBERON:0008193;4.32e-09;1!UBERON:0010912;4.32e-09;1!UBERON:0002514;4.32e-09;1!UBERON:0003457;4.32e-09;1!UBERON:0008907;4.32e-09;1!UBERON:0008001;4.32e-09;1!UBERON:0007213;4.32e-09;1!UBERON:0009891;4.32e-09;1!UBERON:0007914;4.32e-09;1!UBERON:0007375;4.32e-09;1!UBERON:0003323;4.32e-09;1!UBERON:0010258;4.32e-09;1!UBERON:0005253;4.32e-09;1!UBERON:0007842;4.32e-09;1!UBERON:0002397;4.32e-09;1!UBERON:0003113;4.32e-09;1!UBERON:0003277;4.32e-09;1!UBERON:0001709;4.32e-09;1!UBERON:0002244;4.32e-09;1!UBERON:0005620;4.32e-09;1!UBERON:0010364;4.32e-09;1!UBERON:0004288;4.32e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.12e-19,82;UBERON:0002371,3.59e-18,76;UBERON:0004765,2.65e-17,90;UBERON:0002390,9.10e-16,98;UBERON:0003061,9.10e-16,98;UBERON:0001434,2.54e-15,100;UBERON:0002405,1.98e-14,93;UBERON:0002193,4.52e-14,108;UBERON:0002204,2.13e-09,167;UBERON:0005705,5.28e-09,1;UBERON:0008193,5.28e-09,1;UBERON:0010912,5.28e-09,1;UBERON:0002514,5.28e-09,1;UBERON:0003457,5.28e-09,1;UBERON:0008907,5.28e-09,1;UBERON:0008001,5.28e-09,1;UBERON:0007213,5.28e-09,1;UBERON:0009891,5.28e-09,1;UBERON:0007914,5.28e-09,1;UBERON:0009292,5.28e-09,1;UBERON:0003099,5.28e-09,1;UBERON:0007375,5.28e-09,1;UBERON:0003323,5.28e-09,1;UBERON:0010258,5.28e-09,1;UBERON:0007842,5.28e-09,1;UBERON:0009494,5.28e-09,1;UBERON:0010042,5.28e-09,1;UBERON:0010045,5.28e-09,1;UBERON:0010259,5.28e-09,1;UBERON:0010359,5.28e-09,1;UBERON:0009526,5.28e-09,1;UBERON:0002397,5.28e-09,1;UBERON:0003113,5.28e-09,1;UBERON:0003277,5.28e-09,1;UBERON:0001709,5.28e-09,1;UBERON:0004066,5.28e-09,1;UBERON:0002244,5.28e-09,1;UBERON:0005620,5.28e-09,1;UBERON:0004362,5.28e-09,1;UBERON:0010364,5.28e-09,1;UBERON:0010046,5.28e-09,1;UBERON:0005868,5.28e-09,1;UBERON:0007238,5.28e-09,1;UBERON:0004288,5.28e-09,1;UBERON:0004068,5.28e-09,1;UBERON:0010334,5.28e-09,1;UBERON:0003852,5.28e-09,1;UBERON:0010253,5.28e-09,1 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.893922188854576,0,0,0,1.30592814099919,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0.671746422719773,0,0.257575567634187,0.726991193897824,0,0.242584061187816,1.39457422143411,0,0.309706370895104,6.32923263108731,5.12321413058201,7.09446689665756,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0,2.14258724659632,0.320929027076094,0,11.8746468067218,8.57693727773017,7.2458207590558,0.580418477257168,0,0,7.03496262718881,4.69334626578181,2.6062661364614,0,0.368277635987565,0.316462387440884,2.95757400836718,2.33864729961548,0.838634582033504,0.44931452458598,0.901061357049038,0,0.570025487482497,1.79025009479181,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,2.99161459204025,2.48649308061621,0,0,0.271265023699736,0.831883446123229,0.178428988797162,0,0,0,0,0,0,0,0.260650843404249,0.391602314925481,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.844430541190656,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0,0,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.179515288819544,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0.226624183040251,0.293104467356165,0,0,0,0,0,0.427149650270779,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.05802783107205,2.1437183414724,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0.196300467230486,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,1.08043821351123,0,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0.12729431655633,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p4@SECTM1 | |||
}} |
Revision as of 16:35, 11 September 2013
Short description: | p4@SECTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SECTM1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 29bp_to_uc002ken.2_5end |
EntrezGene: | SECTM1 |
HGNC: | 10707 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.21e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.21e-35 | 42 |
myeloid leukocyte | 1.01e-32 | 72 |
defensive cell | 1.18e-30 | 48 |
phagocyte | 1.18e-30 | 48 |
neutrophil | 8.07e-25 | 3 |
monopoietic cell | 4.99e-24 | 59 |
monocyte | 4.99e-24 | 59 |
monoblast | 4.99e-24 | 59 |
promonocyte | 4.99e-24 | 59 |
macrophage dendritic cell progenitor | 3.58e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.94e-21 | 66 |
granulocyte monocyte progenitor cell | 6.58e-21 | 67 |
myeloid cell | 7.20e-21 | 108 |
common myeloid progenitor | 7.20e-21 | 108 |
granulocyte | 3.05e-16 | 8 |
leukocyte | 6.03e-16 | 136 |
hematopoietic oligopotent progenitor cell | 5.53e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.53e-13 | 161 |
hematopoietic stem cell | 2.60e-12 | 168 |
blood cell | 7.20e-12 | 11 |
hematopoietic cell | 1.60e-11 | 177 |
nongranular leukocyte | 3.26e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.21e-10 | 120 |
intermediate monocyte | 1.57e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.57e-08 | 9 |
mesenchymal cell | 3.16e-07 | 354 |
connective tissue cell | 5.19e-07 | 361 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.