FFCP PHASE1:Hg19::chr22:39473269..39473296,+: Difference between revisions
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{{FFCP | 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860573721,10.5327953572802,6.35020748171649,2.921597462471,1.96558024679421,2.05411211129873,0,15.038068625404,8.46458889008017,0.802940375518498,1.21079824314629,2.98092366383228,0.687010689511529,3.07240764308458,4.02616994206349,2.0021897005429,3.90776190804081,0,0,12.4409612098952,0.99921590399346,5.63948020351398,0,2.05111450980652,0,8.91547074219827,0,0.47748896947538,1.78178808499583,0.307160702099232,0,0.422008249231538,0.667852230137435,2.63686198762815,0,0.996239941255349,1.93398740871803,0,0.715880777515084,4.4310529965985,0.311039587661807,1.61763032065188,0,2.04628948090749,1.38100767891707,11.974154617347,2.22273980289274,0,0.278304294485554,0,0,0,0,1.2517279311405,0,0,0,0,1.56262495439963,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,1.53900517007594,0,0,0,0,0.957003479195758,1.09917112082235,0,13.2851287654457,1.72678282034527,5.15256213890485,4.51191321234361,2.74487548044835,2.01385904371011,1.89753732724185,2.86085842164682,1.89898258075224,0.163232808159148,0,0,0,1.14994833854341,1.22206028986725,8.30259160305741,14.9512366125268,13.8881192842256,0.741412462787447,0.802577647298789,0,1.82454789215666,2.54364004611717,0.728341138602278,2.76209081994573,0,0,1.5796644907122,0.300646838828985,1.14057010536972,7.31119259977904,8.27479889688747,5.96472544973728,8.36307008410712,0,2.21879476821022,0.173559738335131,2.6457947301882,0,1.04836000945218,4.98759494167688,0,0,0,1.06687918137261,0.0882561266915003,0.90392296312213,2.19267079434801,0.794858446811959,0.126621591911757,0,0.320635281006135,2.56143593687223,0.999048047910651,0,0,0.171594997861965,0,4.10033367365927,0,3.12579673969312,2.71967400412066,11.9337914634496,0,0.600420288709789,0.547621515567972,1.27746588066972,0.859530882839914,5.78352179414492,0.558564802544508,0.916641696046735,0,0.599037001496973,0,0.89268582976749,0.201550417460179,1.08089965062721,0,0.236349546921671,0.0824158583811665,0.26961417541674,0,8.7213532027758,0,0.544813624446302,0.643012593860077,0.137539436597234,0,0,0,0.121499113316049,0,1.18208560948797,0.314727528809989,0.105600336519406,0,0,2.1440859791201,0,0,0.542999601753713,1.72844298240254,1.30634944043764,0,2.70905318472819,0.851940108927109,9.63152777921068,1.02586563574658,0,0,0.13223260174269,0,2.81926008926669,2.0289608387862,0,1.24271716604159,4.96166021811951,9.09013506730544,2.9230223611415,10.8518013820931,0,0,0.919036730290385,0.327872630709804,0,0,0,0.3755727921195,0,0.776503360757966,0.683060432355218,0,0.499921631848426,0.303298235083296,0,6.58744295154881,0,0,2.08956724041624,2.80455971816669,2.21922344601045,0.947015026375446,2.0125432140206,3.55924488638614,0.457680136793847,2.11723293268535,1.86524640699337,0.73927574994817,1.11507737014592,0.449803112163605,0.931577741257556,2.48823724704513,2.65841714557995,1.04349012362347,2.10360652596106,0.761610424337591,2.03435366602331,0.363697318405119,1.28892668450986,0.464033759878494,0.796191777397232,0.800055529326307,3.09056134664514,4.37774335395695,1.26184898228651,1.54095864325843,6.00436455849792,0.782982875895635,1.13352962756136,4.39892701215285,1.71315693154527,0.358177682162975,2.16161013012681,1.75427239662966,6.36080925405172,0.38582807654183,1.52048196587765,0,0,0,0.276516872303462,2.72804432375144,2.65729680626726,3.59843867362857,1.96565909307848,0,0,20.3987143772029,1.17360902663555,2.06657975592979,1.13503190713367,0,0.139879507719444,1.24415452006595,0,0.215649622793364,0,0.218419276384028,1.3578602396322,0,0.371807292777007,0.558644917973244,0.318004350653419,2.68129933004261,0,1.41070377476274,3.3687002508852,0.385375350578757,1.41696576325585,0.319267718114302,0.205116364240755,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0.381382095467167,4.1421595563606,0,1.80504788038217,3.0255760305528,0,0,0.327543835020193,2.36569737947272,0.270150338473579,0,0,0.443910671357348,0,0,1.48863353516788,0,1.40538670403555,0,0.336283722218824,0.606965604236632,0.227662191351298,0.887023701626388,13.7128445191377,0.857440047187092,0.339848664884159,0.328863867814245,0.945550727071746,4.22679327189863,1.33438257845874,0.157115589916002,0,0,13.3875106555545,0,1.35805433935647,0,0,0.347716544605159,0.801711364730253,1.24329698497822,0,0,0.430227358820278,0.236664001461131,0.596493833314104,10.5846762547732,0.22910686854405,0.62041277132864,0,0.894843454382338,0,0,0,0.923965261706223,0,1.94284397223656,0,0,0.475680363110274,0,0,2.41540549706678,0.694567422971502,1.5299169235277,0,0.735444965261716,0,0.392616934229891,0.297046400327086,0,0.169927114687817,6.6728581765696,4.83434159801829,8.2951159417691,0,0.352894871715692,0,0,0.917458566809082,0.286679166302903,0,0.0679914901909147,0.436350690340377,0.5290268405154,0.743990036333503,1.84870251452567,0.865253124247578,0.252332849670158,0.109265571963696,10.2625785819264,2.34574308406558,1.60330443159336,0.643264296743914,6.51839602160175,7.65364852004218,5.89521086343593,0,0.20686599172379,0.639701945702943,0.952257725854961,1.87307838524418,2.91751157190532,0,0.827413057616144,0.404234377916439,0.653150243690884,0.684466602170562,5.388164241167,1.79305513481691,0.332660356546013,6.67506802609991,0.106727345877715,0,0,0,0.977931553462932,0.813792356631477,0,3.42165449104745,17.3106985843746|short_description=p1@APOBEC3G}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=60489 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17357 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=185bp_to_ENST00000480000_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_APOBEC3G_5end | |||
|id=chr22:39473269..39473296,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.97e-33!182;CL:0000037!2.66e-32!172;CL:0000566!2.66e-32!172;CL:0002032!5.71e-31!165;CL:0000837!5.71e-31!165;CL:0000738!1.04e-26!140;CL:0000542!1.18e-25!53;CL:0000051!1.18e-25!53;CL:0002087!2.37e-25!119;CL:0000838!3.16e-25!52;CL:0002031!1.21e-24!124;CL:0000134!2.67e-17!358;CL:0002320!9.41e-17!365;CL:0000048!1.36e-16!430;CL:0000723!5.23e-16!436;CL:0000034!6.90e-16!444;CL:0000084!1.59e-13!25;CL:0000827!1.59e-13!25;CL:0000219!1.02e-12!390;CL:0000791!3.29e-11!18;CL:0000789!3.29e-11!18;CL:0002420!3.29e-11!18;CL:0002419!3.29e-11!18;CL:0000790!3.29e-11!18;CL:0000945!5.70e-11!24;CL:0000826!5.70e-11!24;CL:0000763!6.31e-10!112;CL:0000049!6.31e-10!112;CL:0000625!8.98e-09!11;CL:0002371!2.63e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.41e-16;53!CL:0000084;5.23e-15;25!CL:0000791;1.46e-12;18!CL:0000789;1.46e-12;18!CL:0002419;1.46e-12;18!CL:0000945;5.04e-12;24!CL:0000625;7.25e-10;11!CL:0002087;7.51e-09;104!CL:0000988;8.28e-07;177!CL:0000738;9.78e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.03e-38,177;CL:0000037,1.54e-37,168;CL:0002032,1.57e-36,161;CL:0000837,1.57e-36,161;CL:0000738,1.58e-31,136;CL:0002087,1.35e-29,115;CL:0002031,3.16e-29,120;CL:0000542,4.74e-29,53;CL:0000051,4.74e-29,53;CL:0000838,1.46e-28,52;CL:0000134,4.15e-17,354;CL:0002320,3.67e-16,361;CL:0000084,3.33e-15,25;CL:0000827,3.33e-15,25;CL:0000048,1.22e-14,427;CL:0000723,3.12e-14,433;CL:0000034,6.80e-14,441;CL:0000791,1.46e-12,18;CL:0000789,1.46e-12,18;CL:0002420,1.46e-12,18;CL:0002419,1.46e-12,18;CL:0000790,1.46e-12,18;CL:0000945,2.72e-12,24;CL:0000826,2.72e-12,24;CL:0000219,3.76e-12,386;CL:0000763,6.83e-12,108;CL:0000049,6.83e-12,108;CL:0000625,8.71e-10,11;CL:0000766,1.51e-07,72;CL:0000236,1.90e-07,14;CL:0000839,4.17e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000051;1.41e-16;53!CL:0000790;1.46e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!6.23e-10!51;DOID:0060083!6.23e-10!51;DOID:1240!5.34e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.21e-10,51;DOID:0060083,4.21e-10,51;DOID:1240,1.30e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.70e-17!375;UBERON:0002390!5.76e-13!102;UBERON:0003061!5.76e-13!102;UBERON:0002193!1.28e-12!112;UBERON:0000178!3.70e-09!15;UBERON:0000179!3.70e-09!15;UBERON:0000463!3.70e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.38e-10;15!UBERON:0000179;3.38e-10;15!UBERON:0000463;3.38e-10;15!UBERON:0002390;5.29e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.86e-16,371;UBERON:0002390,6.73e-15,98;UBERON:0003061,6.73e-15,98;UBERON:0002193,1.36e-14,108;UBERON:0000178,3.17e-10,15;UBERON:0000179,3.17e-10,15;UBERON:0000463,3.17e-10,15;UBERON:0002405,1.62e-08,93 | |||
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| |||
|short_description=p1@APOBEC3G | |||
}} |
Revision as of 12:02, 12 September 2013
Short description: | p1@APOBEC3G |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_APOBEC3G_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 185bp_to_ENST00000480000_5end |
EntrezGene: | APOBEC3G |
HGNC: | 17357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.86e-16 | 371 |
hematopoietic system | 6.73e-15 | 98 |
blood island | 6.73e-15 | 98 |
hemolymphoid system | 1.36e-14 | 108 |
blood | 3.17e-10 | 15 |
haemolymphatic fluid | 3.17e-10 | 15 |
organism substance | 3.17e-10 | 15 |
immune system | 1.62e-08 | 93 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.21e-10 | 51 |
immune system cancer | 4.21e-10 | 51 |
leukemia | 1.30e-08 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.