FFCP PHASE1:Hg19::chr3:12602482..12602502,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=40375|TSSclassifier=S|UniProt=|association_with_transcript=16bp_to_ENST00000447550_5end|coexpression_cluster_id=C11|description=CAGE_peak_1_at_MKRN2-AS1_5end|id=chr3:12602482..12602502,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!8.04e-48!34;UBERON:0001049!1.30e-47!57;UBERON:0005068!1.30e-47!57;UBERON:0006241!1.30e-47!57;UBERON:0007135!1.30e-47!57;UBERON:0002780!1.30e-47!41;UBERON:0001890!1.30e-47!41;UBERON:0006240!1.30e-47!41;UBERON:0003080!2.21e-46!42;UBERON:0001869!4.25e-46!32;UBERON:0002616!8.06e-46!59;UBERON:0000955!1.91e-44!69;UBERON:0006238!1.91e-44!69;UBERON:0002791!2.94e-44!33;UBERON:0002619!1.06e-41!22;UBERON:0001950!4.28e-40!20;UBERON:0001017!1.39e-39!82;UBERON:0002020!1.67e-38!34;UBERON:0003528!1.67e-38!34;UBERON:0003075!6.70e-38!86;UBERON:0007284!6.70e-38!86;UBERON:0005743!1.78e-37!86;UBERON:0000956!1.75e-36!25;UBERON:0000203!1.75e-36!25;UBERON:0007023!2.28e-36!115;UBERON:0002346!6.16e-36!90;UBERON:0000073!2.27e-33!94;UBERON:0001016!2.27e-33!94;UBERON:0003056!1.54e-30!61;UBERON:0000200!3.31e-28!6;UBERON:0000033!2.74e-24!123;UBERON:0000153!7.23e-23!129;UBERON:0007811!7.23e-23!129;UBERON:0004121!3.02e-20!169;UBERON:0000924!1.27e-19!173;UBERON:0006601!1.27e-19!173;UBERON:0002771!3.92e-15!3;UBERON:0001871!1.41e-14!7;UBERON:0000025!4.27e-13!194;UBERON:0000369!3.90e-11!4;UBERON:0002435!3.90e-11!4;UBERON:0000204!3.90e-11!4;UBERON:0010082!3.90e-11!4;UBERON:0001870!1.68e-10!2;UBERON:0004111!3.37e-10!241;UBERON:0000064!5.18e-09!219;UBERON:0001872!7.27e-09!5;UBERON:0000349!1.09e-08!5;UBERON:0002680!1.34e-08!9;UBERON:0001895!1.34e-08!9;UBERON:0010092!1.34e-08!9;UBERON:0002021!1.65e-08!5;UBERON:0002420!1.95e-08!9;UBERON:0007245!1.95e-08!9;UBERON:0010009!1.95e-08!9;UBERON:0010011!1.95e-08!9;UBERON:0000454!1.95e-08!9;UBERON:0000477!2.55e-08!286;UBERON:0002037!5.93e-08!6;UBERON:0006215!5.93e-08!6;UBERON:0005383!3.08e-07!3;UBERON:0005382!3.08e-07!3;UBERON:0003978!5.48e-07!3;UBERON:0009751!5.48e-07!3;UBERON:0000946!5.48e-07!3;UBERON:0002523!5.48e-07!3;UBERON:0005983!5.48e-07!3;UBERON:0002165!5.48e-07!3;UBERON:0002062!5.48e-07!3;UBERON:0007280!5.48e-07!3|ontology_enrichment_uberon_v019=UBERON:0002037;3.16e-43;6!UBERON:0002022;2.73e-29;1!UBERON:0002680;3.84e-29;9!UBERON:0001895;3.84e-29;9!UBERON:0004733;4.42e-22;12!UBERON:0002028;4.42e-22;12!UBERON:0004732;1.90e-20;13!UBERON:0000200;1.04e-19;6!UBERON:0002771;2.21e-15;2!UBERON:0002360;2.21e-15;2!UBERON:0002702;2.21e-15;2!UBERON:0000094;2.21e-15;2!UBERON:0010743;2.21e-15;2!UBERON:0000073;1.28e-14;53!UBERON:0002616;1.28e-14;53!UBERON:0001950;8.91e-13;20!UBERON:0002619;9.92e-12;22!UBERON:0001870;1.04e-10;3!UBERON:0000956;1.85e-10;25!UBERON:0000203;1.85e-10;25!UBERON:0000955;3.06e-10;68!UBERON:0001016;8.32e-10;83!UBERON:0001017;8.57e-10;75|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.16e-43,6;UBERON:0006215,3.16e-43,6;UBERON:0002022,1.78e-29,1;UBERON:0002680,3.84e-29,9;UBERON:0001895,3.84e-29,9;UBERON:0010092,3.84e-29,9;UBERON:0004733,4.42e-22,12;UBERON:0002028,4.42e-22,12;UBERON:0007277,4.42e-22,12;UBERON:0004732,1.90e-20,13;UBERON:0000200,1.04e-19,6;UBERON:0000073,3.99e-19,53;UBERON:0002616,3.99e-19,53;UBERON:0001049,3.89e-18,56;UBERON:0005068,3.89e-18,56;UBERON:0006241,3.89e-18,56;UBERON:0007135,3.89e-18,56;UBERON:0003076,7.82e-18,15;UBERON:0003057,7.82e-18,15;UBERON:0001017,6.63e-17,81;UBERON:0002702,2.05e-15,2;UBERON:0002771,2.37e-15,2;UBERON:0002360,2.74e-15,2;UBERON:0000094,2.74e-15,2;UBERON:0010743,2.74e-15,2;UBERON:0001016,2.81e-15,89;UBERON:0000955,7.93e-15,68;UBERON:0006238,7.93e-15,68;UBERON:0001950,8.39e-13,20;UBERON:0003075,1.51e-12,82;UBERON:0007284,1.51e-12,82;UBERON:0002346,5.57e-12,86;UBERON:0002619,9.39e-12,22;UBERON:0001870,9.90e-11,3;UBERON:0000956,1.76e-10,25;UBERON:0000203,1.76e-10,25;UBERON:0010371,5.80e-10,104;UBERON:0007023,3.55e-09,114;UBERON:0002791,2.12e-08,32;UBERON:0001869,2.12e-08,32;UBERON:0004121,3.72e-08,171;UBERON:0000924,3.72e-08,171;UBERON:0006601,3.72e-08,171;UBERON:0003528,5.87e-08,34;UBERON:0002020,5.87e-08,34;UBERON:0001893,5.87e-08,34;UBERON:0010314,6.75e-08,132;UBERON:0002780,9.81e-07,41;UBERON:0001890,9.81e-07,41;UBERON:0003080,9.81e-07,41;UBERON:0006240,9.81e-07,41|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=40375 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000447550_5end | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_MKRN2-AS1_5end | |||
|id=chr3:12602482..12602502,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.28e-85;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!8.04e-48!34;UBERON:0001049!1.30e-47!57;UBERON:0005068!1.30e-47!57;UBERON:0006241!1.30e-47!57;UBERON:0007135!1.30e-47!57;UBERON:0002780!1.30e-47!41;UBERON:0001890!1.30e-47!41;UBERON:0006240!1.30e-47!41;UBERON:0003080!2.21e-46!42;UBERON:0001869!4.25e-46!32;UBERON:0002616!8.06e-46!59;UBERON:0000955!1.91e-44!69;UBERON:0006238!1.91e-44!69;UBERON:0002791!2.94e-44!33;UBERON:0002619!1.06e-41!22;UBERON:0001950!4.28e-40!20;UBERON:0001017!1.39e-39!82;UBERON:0002020!1.67e-38!34;UBERON:0003528!1.67e-38!34;UBERON:0003075!6.70e-38!86;UBERON:0007284!6.70e-38!86;UBERON:0005743!1.78e-37!86;UBERON:0000956!1.75e-36!25;UBERON:0000203!1.75e-36!25;UBERON:0007023!2.28e-36!115;UBERON:0002346!6.16e-36!90;UBERON:0000073!2.27e-33!94;UBERON:0001016!2.27e-33!94;UBERON:0003056!1.54e-30!61;UBERON:0000200!3.31e-28!6;UBERON:0000033!2.74e-24!123;UBERON:0000153!7.23e-23!129;UBERON:0007811!7.23e-23!129;UBERON:0004121!3.02e-20!169;UBERON:0000924!1.27e-19!173;UBERON:0006601!1.27e-19!173;UBERON:0002771!3.92e-15!3;UBERON:0001871!1.41e-14!7;UBERON:0000025!4.27e-13!194;UBERON:0000369!3.90e-11!4;UBERON:0002435!3.90e-11!4;UBERON:0000204!3.90e-11!4;UBERON:0010082!3.90e-11!4;UBERON:0001870!1.68e-10!2;UBERON:0004111!3.37e-10!241;UBERON:0000064!5.18e-09!219;UBERON:0001872!7.27e-09!5;UBERON:0000349!1.09e-08!5;UBERON:0002680!1.34e-08!9;UBERON:0001895!1.34e-08!9;UBERON:0010092!1.34e-08!9;UBERON:0002021!1.65e-08!5;UBERON:0002420!1.95e-08!9;UBERON:0007245!1.95e-08!9;UBERON:0010009!1.95e-08!9;UBERON:0010011!1.95e-08!9;UBERON:0000454!1.95e-08!9;UBERON:0000477!2.55e-08!286;UBERON:0002037!5.93e-08!6;UBERON:0006215!5.93e-08!6;UBERON:0005383!3.08e-07!3;UBERON:0005382!3.08e-07!3;UBERON:0003978!5.48e-07!3;UBERON:0009751!5.48e-07!3;UBERON:0000946!5.48e-07!3;UBERON:0002523!5.48e-07!3;UBERON:0005983!5.48e-07!3;UBERON:0002165!5.48e-07!3;UBERON:0002062!5.48e-07!3;UBERON:0007280!5.48e-07!3 | |||
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|short_description=p1@MKRN2-AS1 | |||
}} |
Revision as of 21:19, 12 September 2013
Short description: | p1@MKRN2-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MKRN2-AS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 16bp_to_ENST00000447550_5end |
EntrezGene: | NA |
HGNC: | 40375 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.