FFCP PHASE1:Hg19::chr3:16553761..16553777,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1919|description=CAGE_peak_at_chr3:16553761..16553777,+|id=chr3:16553761..16553777,+|ontology_enrichment_celltype=CL:0000738!8.02e-53!140;CL:0000988!1.40e-47!182;CL:0000037!2.66e-47!172;CL:0000566!2.66e-47!172;CL:0002031!3.82e-42!124;CL:0002087!2.00e-41!119;CL:0002032!3.21e-41!165;CL:0000837!3.21e-41!165;CL:0000838!3.45e-38!52;CL:0000542!3.31e-37!53;CL:0000051!3.31e-37!53;CL:0000791!7.68e-20!18;CL:0000789!7.68e-20!18;CL:0002420!7.68e-20!18;CL:0002419!7.68e-20!18;CL:0000790!7.68e-20!18;CL:0000084!4.33e-19!25;CL:0000827!4.33e-19!25;CL:0000134!3.19e-18!358;CL:0002320!2.39e-17!365;CL:0000945!7.77e-16!24;CL:0000826!7.77e-16!24;CL:0000219!8.12e-15!390;CL:0002057!2.31e-12!42;CL:0000034!3.13e-12!444;CL:0000625!3.75e-12!11;CL:0002393!3.77e-12!9;CL:0002397!3.77e-12!9;CL:0000048!8.60e-12!430;CL:0000451!9.96e-12!10;CL:0000763!1.47e-11!112;CL:0000049!1.47e-11!112;CL:0000557!1.99e-11!71;CL:0000723!2.87e-11!436;CL:0000860!4.17e-11!45;CL:0000624!4.41e-11!6;CL:0000766!5.36e-10!76;CL:0000080!8.48e-10!6;CL:0000453!1.71e-09!5;CL:0002009!4.08e-09!65;CL:0000236!4.69e-09!14;CL:0000990!6.34e-09!8;CL:0000839!1.21e-08!70;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63|ontology_enrichment_celltype_v019=CL:0000542;1.41e-21;53!CL:0000624;2.62e-21;6!CL:0000791;3.10e-21;18!CL:0000789;3.10e-21;18!CL:0002419;3.10e-21;18!CL:0000084;1.67e-20;25!CL:0000451;2.16e-19;10!CL:0000453;1.31e-17;5!CL:0000990;9.26e-14;8!CL:0000898;9.00e-12;3!CL:0000623;2.00e-11;3!CL:0000784;2.38e-11;3!CL:0000945;3.57e-11;24!CL:0002087;1.29e-10;104!CL:0000226;1.32e-10;3!CL:0000842;1.32e-10;3!CL:0000767;4.48e-10;3!CL:0000738;1.72e-09;136!CL:0000815;2.21e-08;2!CL:0000792;2.21e-08;2!CL:0002677;2.21e-08;2!CL:0001014;2.63e-08;2!CL:0001016;2.63e-08;2!CL:0000236;3.59e-08;13!CL:0000625;1.93e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,8.62e-48,136;CL:0000988,2.08e-39,177;CL:0000037,2.39e-38,168;CL:0000838,7.72e-37,52;CL:0000542,5.19e-36,53;CL:0000051,5.19e-36,53;CL:0002032,3.10e-31,161;CL:0000837,3.10e-31,161;CL:0002031,1.44e-30,120;CL:0002087,3.09e-30,115;CL:0000624,2.85e-21,6;CL:0000791,3.03e-21,18;CL:0000789,3.03e-21,18;CL:0002420,3.03e-21,18;CL:0002419,3.03e-21,18;CL:0000790,3.03e-21,18;CL:0000084,1.45e-20,25;CL:0000827,1.45e-20,25;CL:0000451,1.33e-19,10;CL:0000453,5.56e-18,5;CL:0000990,5.30e-14,8;CL:0000134,3.72e-12,354;CL:0000898,9.73e-12,3;CL:0002320,1.07e-11,361;CL:0000623,2.16e-11,3;CL:0000825,2.16e-11,3;CL:0000784,2.84e-11,3;CL:0000945,3.73e-11,24;CL:0000826,3.73e-11,24;CL:0000226,1.57e-10,3;CL:0000842,1.57e-10,3;CL:0000767,3.66e-10,3;CL:0000219,4.31e-10,386;CL:0000034,9.71e-09,441;CL:0001014,2.22e-08,2;CL:0001016,2.22e-08,2;CL:0000815,2.30e-08,2;CL:0000792,2.30e-08,2;CL:0002677,2.30e-08,2;CL:0000048,3.86e-08,427;CL:0000723,7.16e-08,433;CL:0000236,1.81e-07,14;CL:0000625,1.83e-07,11|ontology_enrichment_development_v019=CL:0000051;1.41e-21;53!CL:0000790;3.10e-21;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.78e-16!102;UBERON:0003061!1.78e-16!102;UBERON:0002384!3.69e-16!375;UBERON:0002193!1.22e-14!112;UBERON:0002371!8.58e-11!80;UBERON:0002405!1.90e-09!115;UBERON:0001474!1.94e-09!86;UBERON:0004765!2.06e-07!101;UBERON:0001434!2.06e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.48e-11,371;UBERON:0002390,1.87e-07,98;UBERON:0003061,1.87e-07,98|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.47781061009902,0.865818594450472,1.57345710739562,1.91914699048606,1.08371286321253,0,0,0,0.154934401160603,0,0.293600439334847,2.21598163412751,2.80762226458198,3.03815219002193,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0.376484679085209,0,0.224723484445085,1.83650335422542,0.641858054152187,1.27867425159808,0,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,2.53169909952708,0.633765858935825,0.425208599930087,0.419317291016752,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.426730222566507,1.20118796110804,1.14950487990897,0,1.90810750907073,1.1384259382189,1.76171156811282,0.764546456250458,1.32171328579026,1.12101712596307,0.526768169550154,3.14735632182133,3.53709686474248,2.67281948699362,0,4.23698946623668,1.89379122293893,0,0.111410456885174,6.18672405697158,1.32920336750173,0.541607727530031,0.25618263945135,0.260118695119756,0,0.276350017785848,0.579606171470105,6.52460877913066,1.07016331235885,1.04535523804977,0,6.13152789763074,1.71813722741315,1.77113784413652,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1919 | |||
|description=CAGE_peak_at_chr3:16553761..16553777,+ | |||
|id=chr3:16553761..16553777,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.02e-53!140;CL:0000988!1.40e-47!182;CL:0000037!2.66e-47!172;CL:0000566!2.66e-47!172;CL:0002031!3.82e-42!124;CL:0002087!2.00e-41!119;CL:0002032!3.21e-41!165;CL:0000837!3.21e-41!165;CL:0000838!3.45e-38!52;CL:0000542!3.31e-37!53;CL:0000051!3.31e-37!53;CL:0000791!7.68e-20!18;CL:0000789!7.68e-20!18;CL:0002420!7.68e-20!18;CL:0002419!7.68e-20!18;CL:0000790!7.68e-20!18;CL:0000084!4.33e-19!25;CL:0000827!4.33e-19!25;CL:0000134!3.19e-18!358;CL:0002320!2.39e-17!365;CL:0000945!7.77e-16!24;CL:0000826!7.77e-16!24;CL:0000219!8.12e-15!390;CL:0002057!2.31e-12!42;CL:0000034!3.13e-12!444;CL:0000625!3.75e-12!11;CL:0002393!3.77e-12!9;CL:0002397!3.77e-12!9;CL:0000048!8.60e-12!430;CL:0000451!9.96e-12!10;CL:0000763!1.47e-11!112;CL:0000049!1.47e-11!112;CL:0000557!1.99e-11!71;CL:0000723!2.87e-11!436;CL:0000860!4.17e-11!45;CL:0000624!4.41e-11!6;CL:0000766!5.36e-10!76;CL:0000080!8.48e-10!6;CL:0000453!1.71e-09!5;CL:0002009!4.08e-09!65;CL:0000236!4.69e-09!14;CL:0000990!6.34e-09!8;CL:0000839!1.21e-08!70;CL:0002194!1.27e-07!63;CL:0000576!1.27e-07!63;CL:0000040!1.27e-07!63;CL:0000559!1.27e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.41e-21;53!CL:0000624;2.62e-21;6!CL:0000791;3.10e-21;18!CL:0000789;3.10e-21;18!CL:0002419;3.10e-21;18!CL:0000084;1.67e-20;25!CL:0000451;2.16e-19;10!CL:0000453;1.31e-17;5!CL:0000990;9.26e-14;8!CL:0000898;9.00e-12;3!CL:0000623;2.00e-11;3!CL:0000784;2.38e-11;3!CL:0000945;3.57e-11;24!CL:0002087;1.29e-10;104!CL:0000226;1.32e-10;3!CL:0000842;1.32e-10;3!CL:0000767;4.48e-10;3!CL:0000738;1.72e-09;136!CL:0000815;2.21e-08;2!CL:0000792;2.21e-08;2!CL:0002677;2.21e-08;2!CL:0001014;2.63e-08;2!CL:0001016;2.63e-08;2!CL:0000236;3.59e-08;13!CL:0000625;1.93e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.62e-48,136;CL:0000988,2.08e-39,177;CL:0000037,2.39e-38,168;CL:0000838,7.72e-37,52;CL:0000542,5.19e-36,53;CL:0000051,5.19e-36,53;CL:0002032,3.10e-31,161;CL:0000837,3.10e-31,161;CL:0002031,1.44e-30,120;CL:0002087,3.09e-30,115;CL:0000624,2.85e-21,6;CL:0000791,3.03e-21,18;CL:0000789,3.03e-21,18;CL:0002420,3.03e-21,18;CL:0002419,3.03e-21,18;CL:0000790,3.03e-21,18;CL:0000084,1.45e-20,25;CL:0000827,1.45e-20,25;CL:0000451,1.33e-19,10;CL:0000453,5.56e-18,5;CL:0000990,5.30e-14,8;CL:0000134,3.72e-12,354;CL:0000898,9.73e-12,3;CL:0002320,1.07e-11,361;CL:0000623,2.16e-11,3;CL:0000825,2.16e-11,3;CL:0000784,2.84e-11,3;CL:0000945,3.73e-11,24;CL:0000826,3.73e-11,24;CL:0000226,1.57e-10,3;CL:0000842,1.57e-10,3;CL:0000767,3.66e-10,3;CL:0000219,4.31e-10,386;CL:0000034,9.71e-09,441;CL:0001014,2.22e-08,2;CL:0001016,2.22e-08,2;CL:0000815,2.30e-08,2;CL:0000792,2.30e-08,2;CL:0002677,2.30e-08,2;CL:0000048,3.86e-08,427;CL:0000723,7.16e-08,433;CL:0000236,1.81e-07,14;CL:0000625,1.83e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;1.41e-21;53!CL:0000790;3.10e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.78e-16!102;UBERON:0003061!1.78e-16!102;UBERON:0002384!3.69e-16!375;UBERON:0002193!1.22e-14!112;UBERON:0002371!8.58e-11!80;UBERON:0002405!1.90e-09!115;UBERON:0001474!1.94e-09!86;UBERON:0004765!2.06e-07!101;UBERON:0001434!2.06e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.48e-11,371;UBERON:0002390,1.87e-07,98;UBERON:0003061,1.87e-07,98 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.47781061009902,0.865818594450472,1.57345710739562,1.91914699048606,1.08371286321253,0,0,0,0.154934401160603,0,0.293600439334847,2.21598163412751,2.80762226458198,3.03815219002193,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0,0,0.376484679085209,0,0.224723484445085,1.83650335422542,0.641858054152187,1.27867425159808,0,0.398927315243264,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,2.53169909952708,0.633765858935825,0.425208599930087,0.419317291016752,0,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.426730222566507,1.20118796110804,1.14950487990897,0,1.90810750907073,1.1384259382189,1.76171156811282,0.764546456250458,1.32171328579026,1.12101712596307,0.526768169550154,3.14735632182133,3.53709686474248,2.67281948699362,0,4.23698946623668,1.89379122293893,0,0.111410456885174,6.18672405697158,1.32920336750173,0.541607727530031,0.25618263945135,0.260118695119756,0,0.276350017785848,0.579606171470105,6.52460877913066,1.07016331235885,1.04535523804977,0,6.13152789763074,1.71813722741315,1.77113784413652,0.318565414324097,0.651083453856419,0,0.150575119077773,0.127986611154418,1.24930726552346,0.236777252044017,1.64225599384209,2.41928091869679,4.27904313253612,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,9.77811559651902,2.28797964312051,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65862492432618,0.864719720501769,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56139988262505,6.03757209606648,3.46526197955321,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,5.1771408196468,1.17400313583789,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6480387422676,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.77912677208373,0.741383633679017,1.25306339406546,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0.788662062837943,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,6.74921674654501,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,1.09613338542806,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67664741214532,3.85308036908753,1.96278473107013,0,0,0,3.79976052124367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.299823467774787,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.9234109538194 | |||
|short_description=p@chr3:16553761..16553777,+ | |||
}} |
Revision as of 22:34, 12 September 2013
Short description: | p@chr3:16553761..16553777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:16553761..16553777, + |
Coexpression cluster: | C1919_immature_CD4_Dendritic_Peripheral_Natural_migratory_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.48e-11 | 371 |
hematopoietic system | 1.87e-07 | 98 |
blood island | 1.87e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.