FFCP PHASE1:Mm9::chr15:25293914..25294004,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=13|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:25293914..25294004,-|id=chr15:25293914..25294004,-|ontology_enrichment_celltype=CL:0002319!2.34e-17!43;CL:0000221!3.96e-17!44;CL:0000133!3.96e-17!44;CL:0000393!8.07e-17!39;CL:0000211!8.07e-17!39;CL:0000540!8.29e-17!33;CL:0000047!8.29e-17!33;CL:0000031!8.29e-17!33;CL:0000404!8.29e-17!33;CL:0000055!9.64e-17!50;CL:0000117!3.05e-15!23;CL:0000337!3.05e-15!23;CL:0002321!2.87e-08!70;CL:0000220!2.87e-08!70|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-23,23;CL:0000337,3.50e-23,23;CL:0000540,3.48e-22,33;CL:0000047,3.48e-22,33;CL:0000031,3.48e-22,33;CL:0000404,3.48e-22,33;CL:0002319,2.13e-20,43;CL:0000221,1.18e-19,44;CL:0000133,1.18e-19,44;CL:0000393,1.74e-19,39;CL:0000211,1.74e-19,39;CL:0002321,8.53e-12,70;CL:0002609,2.43e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.66e-29!73;UBERON:0005743!1.66e-29!73;UBERON:0000073!1.02e-28!75;UBERON:0001016!1.02e-28!75;UBERON:0004121!8.06e-22!102;UBERON:0000924!8.06e-22!102;UBERON:0006601!8.06e-22!102;UBERON:0001049!5.39e-21!52;UBERON:0005068!5.39e-21!52;UBERON:0006241!5.39e-21!52;UBERON:0007135!5.39e-21!52;UBERON:0002020!7.66e-21!34;UBERON:0002346!4.53e-20!71;UBERON:0003075!4.53e-20!71;UBERON:0007284!4.53e-20!71;UBERON:0000955!2.34e-19!50;UBERON:0006238!2.34e-19!50;UBERON:0000033!2.82e-19!63;UBERON:0002616!6.77e-19!49;UBERON:0003056!1.09e-18!49;UBERON:0002791!1.51e-17!29;UBERON:0003528!1.51e-17!29;UBERON:0001893!1.51e-17!29;UBERON:0003080!2.33e-17!40;UBERON:0002780!5.21e-17!39;UBERON:0001890!5.21e-17!39;UBERON:0006240!5.21e-17!39;UBERON:0000956!5.30e-13!21;UBERON:0001869!5.30e-13!21;UBERON:0000203!5.30e-13!21;UBERON:0002619!1.40e-10!17;UBERON:0000153!3.25e-10!94;UBERON:0007811!1.82e-09!86;UBERON:0002021!5.10e-08!10;UBERON:0000411!5.10e-08!10;UBERON:0001950!5.10e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.56e-37,73;UBERON:0001016,2.93e-35,75;UBERON:0002020,8.77e-30,34;UBERON:0004121,4.55e-29,95;UBERON:0000924,4.55e-29,95;UBERON:0006601,4.55e-29,95;UBERON:0000073,1.27e-28,54;UBERON:0002346,2.09e-27,64;UBERON:0003075,2.09e-27,64;UBERON:0007284,2.09e-27,64;UBERON:0001049,8.56e-27,52;UBERON:0005068,8.56e-27,52;UBERON:0006241,8.56e-27,52;UBERON:0007135,8.56e-27,52;UBERON:0003528,1.29e-24,29;UBERON:0002791,1.29e-24,29;UBERON:0001893,1.29e-24,29;UBERON:0003080,2.74e-23,40;UBERON:0010371,6.10e-23,73;UBERON:0003056,7.39e-23,49;UBERON:0002780,9.77e-23,39;UBERON:0001890,9.77e-23,39;UBERON:0006240,9.77e-23,39;UBERON:0000955,7.59e-22,47;UBERON:0006238,7.59e-22,47;UBERON:0002616,3.66e-21,46;UBERON:0000956,1.81e-17,21;UBERON:0001869,1.81e-17,21;UBERON:0000203,1.81e-17,21;UBERON:0010314,2.63e-16,92;UBERON:0002619,1.08e-13,17;UBERON:0002021,9.15e-12,10;UBERON:0000411,9.15e-12,10;UBERON:0001950,9.15e-12,10;UBERON:0002420,3.10e-08,8;UBERON:0007245,3.10e-08,8;UBERON:0010009,3.10e-08,8;UBERON:0010011,3.10e-08,8;UBERON:0000454,3.10e-08,8;UBERON:0000025,3.64e-07,114;UBERON:0002240,5.80e-07,6;UBERON:0005174,5.80e-07,6;UBERON:0001137,5.80e-07,6|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,0.503587271902309,0.608261587317087,0.734187008646726,2.34717403304412,0.65407546914134,0.878744730937887,0.58328969722285,1.1198913730029,1.43752564364972,0,0,0.336093799142464,1.54355661621568,0.573066879877513,1.03134418455488,9.91350658212029,11.1088105647127,10.1413024560989,0.677689064138264,0.889294796111139,0,0.988866362566974,0,1.49800055259202,1.15265491596466,8.50254820929517,9.58542162155004,5.67877395648731,6.56997264128748,3.09215957332259,6.49201235839256,8.14686503655009,13.7882817991503,3.30347642998166,3.19218345212969,3.22573719838111,10.0233578674947,11.161492519494,6.77187381723788,2.79182999001381,2.8138130501584,3.51435969886663,10.9012576625257,11.8168495063255,8.01517617048792,0.075726193333184,0.453429360640713,0,0,0,0,0.649776417447669,0,0.140444420131752,0.511290967734173,1.29893002301434,0.70667914902068,0.422530259330042,0,0,0,1.73192832808971,2.02687892380079,1.51657333504435,0.22836775943812,0.258937883647172,0,0.173485326766136,0.913396434936424,0,0.60289056221049,0.352766121407114,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0.83778682725382,0,0.239630249011841,0,0,1.49790639404823,1.83000241127451,5.27748278874031,4.51943232499919,4.09144731728529,1.87009240103604,1.78465389374533,0.407357455401265,0.373220911830279,1.0108910337347,0.210441855886474,1.04096354370163,0.919608417733892,0.900310649026746,2.71268672104287,1.7009124787832,2.3060469651273,0.374806898238915,1.03481348295606,1.07783996466421,0.756424320671277,0.879755620819744,0.657587197282725,0.834141747676794,0.696504333044333,0.411564272815887,0.796137067273973,0,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:25293914..25294004,- | |||
|id=chr15:25293914..25294004,- | |||
|ontology_enrichment_celltype=CL:0002319!2.34e-17!43;CL:0000221!3.96e-17!44;CL:0000133!3.96e-17!44;CL:0000393!8.07e-17!39;CL:0000211!8.07e-17!39;CL:0000540!8.29e-17!33;CL:0000047!8.29e-17!33;CL:0000031!8.29e-17!33;CL:0000404!8.29e-17!33;CL:0000055!9.64e-17!50;CL:0000117!3.05e-15!23;CL:0000337!3.05e-15!23;CL:0002321!2.87e-08!70;CL:0000220!2.87e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-23,23;CL:0000337,3.50e-23,23;CL:0000540,3.48e-22,33;CL:0000047,3.48e-22,33;CL:0000031,3.48e-22,33;CL:0000404,3.48e-22,33;CL:0002319,2.13e-20,43;CL:0000221,1.18e-19,44;CL:0000133,1.18e-19,44;CL:0000393,1.74e-19,39;CL:0000211,1.74e-19,39;CL:0002321,8.53e-12,70;CL:0002609,2.43e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.66e-29!73;UBERON:0005743!1.66e-29!73;UBERON:0000073!1.02e-28!75;UBERON:0001016!1.02e-28!75;UBERON:0004121!8.06e-22!102;UBERON:0000924!8.06e-22!102;UBERON:0006601!8.06e-22!102;UBERON:0001049!5.39e-21!52;UBERON:0005068!5.39e-21!52;UBERON:0006241!5.39e-21!52;UBERON:0007135!5.39e-21!52;UBERON:0002020!7.66e-21!34;UBERON:0002346!4.53e-20!71;UBERON:0003075!4.53e-20!71;UBERON:0007284!4.53e-20!71;UBERON:0000955!2.34e-19!50;UBERON:0006238!2.34e-19!50;UBERON:0000033!2.82e-19!63;UBERON:0002616!6.77e-19!49;UBERON:0003056!1.09e-18!49;UBERON:0002791!1.51e-17!29;UBERON:0003528!1.51e-17!29;UBERON:0001893!1.51e-17!29;UBERON:0003080!2.33e-17!40;UBERON:0002780!5.21e-17!39;UBERON:0001890!5.21e-17!39;UBERON:0006240!5.21e-17!39;UBERON:0000956!5.30e-13!21;UBERON:0001869!5.30e-13!21;UBERON:0000203!5.30e-13!21;UBERON:0002619!1.40e-10!17;UBERON:0000153!3.25e-10!94;UBERON:0007811!1.82e-09!86;UBERON:0002021!5.10e-08!10;UBERON:0000411!5.10e-08!10;UBERON:0001950!5.10e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.56e-37,73;UBERON:0001016,2.93e-35,75;UBERON:0002020,8.77e-30,34;UBERON:0004121,4.55e-29,95;UBERON:0000924,4.55e-29,95;UBERON:0006601,4.55e-29,95;UBERON:0000073,1.27e-28,54;UBERON:0002346,2.09e-27,64;UBERON:0003075,2.09e-27,64;UBERON:0007284,2.09e-27,64;UBERON:0001049,8.56e-27,52;UBERON:0005068,8.56e-27,52;UBERON:0006241,8.56e-27,52;UBERON:0007135,8.56e-27,52;UBERON:0003528,1.29e-24,29;UBERON:0002791,1.29e-24,29;UBERON:0001893,1.29e-24,29;UBERON:0003080,2.74e-23,40;UBERON:0010371,6.10e-23,73;UBERON:0003056,7.39e-23,49;UBERON:0002780,9.77e-23,39;UBERON:0001890,9.77e-23,39;UBERON:0006240,9.77e-23,39;UBERON:0000955,7.59e-22,47;UBERON:0006238,7.59e-22,47;UBERON:0002616,3.66e-21,46;UBERON:0000956,1.81e-17,21;UBERON:0001869,1.81e-17,21;UBERON:0000203,1.81e-17,21;UBERON:0010314,2.63e-16,92;UBERON:0002619,1.08e-13,17;UBERON:0002021,9.15e-12,10;UBERON:0000411,9.15e-12,10;UBERON:0001950,9.15e-12,10;UBERON:0002420,3.10e-08,8;UBERON:0007245,3.10e-08,8;UBERON:0010009,3.10e-08,8;UBERON:0010011,3.10e-08,8;UBERON:0000454,3.10e-08,8;UBERON:0000025,3.64e-07,114;UBERON:0002240,5.80e-07,6;UBERON:0005174,5.80e-07,6;UBERON:0001137,5.80e-07,6 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,0.503587271902309,0.608261587317087,0.734187008646726,2.34717403304412,0.65407546914134,0.878744730937887,0.58328969722285,1.1198913730029,1.43752564364972,0,0,0.336093799142464,1.54355661621568,0.573066879877513,1.03134418455488,9.91350658212029,11.1088105647127,10.1413024560989,0.677689064138264,0.889294796111139,0,0.988866362566974,0,1.49800055259202,1.15265491596466,8.50254820929517,9.58542162155004,5.67877395648731,6.56997264128748,3.09215957332259,6.49201235839256,8.14686503655009,13.7882817991503,3.30347642998166,3.19218345212969,3.22573719838111,10.0233578674947,11.161492519494,6.77187381723788,2.79182999001381,2.8138130501584,3.51435969886663,10.9012576625257,11.8168495063255,8.01517617048792,0.075726193333184,0.453429360640713,0,0,0,0,0.649776417447669,0,0.140444420131752,0.511290967734173,1.29893002301434,0.70667914902068,0.422530259330042,0,0,0,1.73192832808971,2.02687892380079,1.51657333504435,0.22836775943812,0.258937883647172,0,0.173485326766136,0.913396434936424,0,0.60289056221049,0.352766121407114,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0.83778682725382,0,0.239630249011841,0,0,1.49790639404823,1.83000241127451,5.27748278874031,4.51943232499919,4.09144731728529,1.87009240103604,1.78465389374533,0.407357455401265,0.373220911830279,1.0108910337347,0.210441855886474,1.04096354370163,0.919608417733892,0.900310649026746,2.71268672104287,1.7009124787832,2.3060469651273,0.374806898238915,1.03481348295606,1.07783996466421,0.756424320671277,0.879755620819744,0.657587197282725,0.834141747676794,0.696504333044333,0.411564272815887,0.796137067273973,0,0.257347907114715,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0,0.16455984991348,0,0,0,0,0,2.3131894342054,5.35103984372279,0,0,0.639864751605702,1.39342003116263,0,0.403367049246685,0.444756087689741,0,0,0,0,0.397912944082302,0,0,0.216138049874694,0,0.569003702859245,0.685491075658373,1.1270773567308,1.22190796707189,0,0.420814919341911,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,1.13694847062291,0.488894929326078,0.509235257325564,0.704070744865506,0,0,0.195133647857799,0,0.44292937929755,0,0.163863314715738,0,0,0,1.63171705145613,0,0,1.12385412991454,0.820481806145422,0.655739781506702,0,1.26203287766503,0.390438744296638,3.87762115919038,0.716906393857656,1.33679204449436,0.566153061577665,0.809621403349789,4.09158201075837,2.76701444562566,1.92792789853084,0.141940085208269,0.178065603667255,0.325773918707152,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,1.44048875225048,0.388076051348264,2.35770738534752,0.354680467284547,0.535106452806212,2.13913726782757,0,0.938686832254841,0.63549621259146,0.220528398054962,0,0.645857706783622,0.120625849856312,0,0.164140899745061,0,2.41052892613663,0,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,0.339956859987711,0.279902904647316,0.276399947608848,0.954670618015114,1.26534397432454,0.406638934253697,0.648032044930808,1.04544148007234,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0.56369293868419,0.598066184175915,0.66183396182839,0.583353565032143,0.129159823477731,0,0.234714477291508,0.781226309063701,1.78260885523708,0.724752362478018,0,0,0.810900861160657,0.513554785824136,0.25984164595559,0,0.198681354781265,0,0.443068581523732,0.100966449948148,0.15241361331,0.201652370273681,0,0.288635524920988,0,0,1.33191572024439,1.16628013592318,1.34307693091263,0.19318959403219,0.375364950902364,0.183151624267265,0,0,16.3778034358949,12.889106622201,14.8952833494243,16.497905504994,6.16574267793578,8.3093328712867,10.8003600037089,7.20513925158753,6.79713613476307,8.80192529978094,2.07574695168353,1.99512436700516,1.53660245178721,0.972426868273176,1.67690530102386,0.735374033800057,0.888986911206461,1.03017528619447,0.962757628775446,0.252697211763798,0.760437899670719,0.754505365544305,1.12369808963859,0.192075457214608,0.746661096422973,1.42888107384922,0.347652977834566,0.578727661391115,0,1.47198920134397,1.02860775715625,2.30718548007139,1.43061713968393,1.59881058295561,0.564656282491984,0.676916863133412,0.73171189149109,1.57841826862706,1.08643291076689,0.561142271657738,0.474540072496697,1.77308068276014,1.63692417267876,1.23949472948773,0.964533054905707,2.49810577937946,1.40358965067245,0.429742108096597,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr15:25293914..25294004,- | |||
}} |
Revision as of 10:16, 13 September 2013
Short description: | p@chr15:25293914..25294004, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25293914..25294004, - |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.50e-23 | 23 |
neuroblast (sensu Vertebrata) | 3.50e-23 | 23 |
neuron | 3.48e-22 | 33 |
neuronal stem cell | 3.48e-22 | 33 |
neuroblast | 3.48e-22 | 33 |
electrically signaling cell | 3.48e-22 | 33 |
neural cell | 2.13e-20 | 43 |
ectodermal cell | 1.18e-19 | 44 |
neurectodermal cell | 1.18e-19 | 44 |
electrically responsive cell | 1.74e-19 | 39 |
electrically active cell | 1.74e-19 | 39 |
embryonic cell | 8.53e-12 | 70 |
neuron of cerebral cortex | 2.43e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.