FFCP PHASE1:Hg19::chr4:41699402..41699405,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22998|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29191|TSSclassifier=N|UniProt=|association_with_transcript=-453bp_to_AK026815_5end|description=CAGE_peak_9_at_LIMCH1_5end|id=chr4:41699402..41699405,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000136;2.37e-08;13|ontology_enrichment_celltype_v019_2=CL:0000136,5.88e-08,15|ontology_enrichment_development_v019=UBERON:0008947;2.46e-12;29|ontology_enrichment_disease=DOID:0050687!7.14e-07!143;DOID:305!9.48e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.31e-19!115;UBERON:0000477!9.89e-18!286;UBERON:0004111!1.02e-15!241;UBERON:0001049!5.42e-15!57;UBERON:0005068!5.42e-15!57;UBERON:0006241!5.42e-15!57;UBERON:0007135!5.42e-15!57;UBERON:0002020!2.43e-14!34;UBERON:0003528!2.43e-14!34;UBERON:0000025!2.99e-14!194;UBERON:0005743!3.19e-14!86;UBERON:0001893!6.86e-14!34;UBERON:0003075!9.90e-14!86;UBERON:0007284!9.90e-14!86;UBERON:0000073!1.12e-13!94;UBERON:0001016!1.12e-13!94;UBERON:0002791!1.41e-13!33;UBERON:0002346!1.55e-13!90;UBERON:0001017!2.21e-13!82;UBERON:0002780!3.62e-13!41;UBERON:0001890!3.62e-13!41;UBERON:0006240!3.62e-13!41;UBERON:0000955!7.70e-13!69;UBERON:0006238!7.70e-13!69;UBERON:0001869!8.40e-13!32;UBERON:0003080!1.72e-12!42;UBERON:0000475!2.11e-12!365;UBERON:0000064!1.93e-11!219;UBERON:0000481!6.23e-11!347;UBERON:0002616!6.33e-11!59;UBERON:0003056!6.23e-10!61;UBERON:0000956!7.52e-10!25;UBERON:0000203!7.52e-10!25;UBERON:0000483!1.96e-09!309;UBERON:0000119!6.35e-09!312;UBERON:0002619!1.06e-08!22;UBERON:0001737!1.48e-08!9;UBERON:0000033!2.84e-08!123;UBERON:0000153!4.85e-08!129;UBERON:0007811!4.85e-08!129;UBERON:0000468!8.99e-08!659;UBERON:0001950!1.01e-07!20;UBERON:0000062!2.82e-07!511;UBERON:0000924!4.67e-07!173;UBERON:0006601!4.67e-07!173;UBERON:0004121!5.24e-07!169;UBERON:0000063!8.29e-07!97|ontology_enrichment_uberon_v019=UBERON:0003528;1.55e-15;34!UBERON:0002020;1.55e-15;34!UBERON:0002791;4.90e-15;32!UBERON:0001893;1.37e-14;34!UBERON:0001869;1.81e-14;32!UBERON:0002780;7.21e-13;41!UBERON:0001890;7.21e-13;41!UBERON:0001737;1.04e-12;9!UBERON:0001557;1.04e-12;9!UBERON:0000956;1.38e-12;25!UBERON:0000203;1.38e-12;25!UBERON:0000073;1.06e-10;53!UBERON:0002616;1.06e-10;53!UBERON:0002619;1.15e-10;22!UBERON:0001950;3.32e-09;20!UBERON:0003688;2.82e-07;6!UBERON:0002358;2.82e-07;6!UBERON:0003684;2.82e-07;6!UBERON:0001178;2.82e-07;6!UBERON:0004457;3.34e-07;9!UBERON:0000042;3.34e-07;9!UBERON:0000125;3.78e-07;9!UBERON:0002308;3.78e-07;9!UBERON:0000955;6.98e-07;68|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.89e-20,56;UBERON:0005068,7.89e-20,56;UBERON:0006241,7.89e-20,56;UBERON:0007135,7.89e-20,56;UBERON:0003528,2.35e-18,34;UBERON:0002020,2.35e-18,34;UBERON:0007023,2.46e-18,114;UBERON:0001893,1.06e-17,34;UBERON:0000073,1.11e-17,53;UBERON:0002616,1.11e-17,53;UBERON:0002780,2.77e-17,41;UBERON:0001890,2.77e-17,41;UBERON:0003080,2.77e-17,41;UBERON:0006240,2.77e-17,41;UBERON:0002791,1.43e-16,32;UBERON:0003075,4.70e-16,82;UBERON:0007284,4.70e-16,82;UBERON:0001869,4.90e-16,32;UBERON:0011216,7.61e-16,223;UBERON:0001017,1.58e-15,81;UBERON:0000955,8.44e-15,68;UBERON:0006238,8.44e-15,68;UBERON:0002346,1.18e-14,86;UBERON:0001016,1.57e-14,89;UBERON:0003056,4.01e-13,61;UBERON:0001737,9.97e-13,9;UBERON:0000956,1.39e-12,25;UBERON:0000203,1.39e-12,25;UBERON:0000025,3.81e-11,192;UBERON:0002619,8.54e-11,22;UBERON:0010314,2.49e-10,132;UBERON:0004111,3.51e-10,240;UBERON:0010371,7.70e-10,104;UBERON:0001950,2.62e-09,20;UBERON:0008947,4.21e-08,38;UBERON:0003258,4.21e-08,38;UBERON:0000125,2.10e-07,9;UBERON:0002308,2.10e-07,9;UBERON:0003688,2.37e-07,6;UBERON:0002358,2.37e-07,6;UBERON:0003684,2.37e-07,6;UBERON:0001178,2.37e-07,6;UBERON:0001041,4.06e-07,87;UBERON:0001557,7.99e-07,19|phase1_expression=4.36028110249336,5.35251309727458,2.53717927372748,16.0117277365009,3.12872766099101,9.59572376510406,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0,0,2.0036519099174,1.09499540058307,1.63205431473244,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0.722878304769133,1.50401373190767,2.02785126545153,0,0,0.283604451492204,0.665188192387692,0,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,1.03366703667732,0.35576626268671,0.33472061276467,0.402829317109147,1.52054421143703,0.24406205754817,0.367663080345869,0.81014194788176,0.446498641420399,0.898117490504679,0,0,0,0.183201743930407,0,0,0,0.993943903390637,1.2663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0.1683361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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29191 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-453bp_to_AK026815_5end | |||
|description=CAGE_peak_9_at_LIMCH1_5end | |||
|id=chr4:41699402..41699405,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.37e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.88e-08,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.46e-12;29 | |||
|ontology_enrichment_disease=DOID:0050687!7.14e-07!143;DOID:305!9.48e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p9@LIMCH1 | |||
}} |
Revision as of 10:56, 13 September 2013
Short description: | p9@LIMCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_LIMCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -453bp_to_AK026815_5end |
EntrezGene: | LIMCH1 |
HGNC: | 29191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.88e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.