FFCP PHASE1:Hg19::chr5:33892204..33892218,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81792|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14605|TSSclassifier=S|UniProt=|association_with_transcript=78bp_to_ENST00000504830_5end|coexpression_cluster_id=C1960|description=CAGE_peak_6_at_ADAMTS12_5end|id=chr5:33892204..33892218,-|ontology_enrichment_celltype=CL:0000055!1.55e-32!180;CL:0000183!1.04e-21!59;CL:0000187!1.55e-21!54;CL:0000680!1.04e-20!57;CL:0000056!1.04e-20!57;CL:0000355!1.04e-20!57;CL:0000393!6.40e-20!60;CL:0000211!6.40e-20!60;CL:0000057!5.81e-17!75;CL:0000192!2.54e-16!42;CL:0000514!2.54e-16!42;CL:0000359!1.60e-12!32;CL:0000222!2.27e-11!119;CL:0002494!1.13e-08!16;CL:0002334!8.62e-07!12|ontology_enrichment_celltype_v019=CL:0000359;1.64e-14;32!CL:0000187;2.35e-14;55!CL:0000192;3.61e-13;43!CL:0000393;7.36e-12;61!CL:0000211;7.36e-12;61!CL:0002494;1.83e-10;16!CL:0002334;2.24e-10;12!CL:0002548;2.78e-07;6!CL:0000136;4.27e-07;13|ontology_enrichment_celltype_v019_2=CL:0000187,4.80e-23,55;CL:0000680,3.70e-21,58;CL:0000056,3.70e-21,58;CL:0000355,3.70e-21,58;CL:0000393,1.39e-20,61;CL:0000211,1.39e-20,61;CL:0000192,1.73e-18,43;CL:0000514,1.73e-18,43;CL:0000359,1.57e-15,32;CL:0000048,2.10e-11,427;CL:0000723,8.36e-11,433;CL:0000034,8.77e-11,441;CL:0000057,1.00e-10,76;CL:0002494,2.02e-10,16;CL:0002334,4.16e-10,12;CL:0000222,2.20e-09,121;CL:0002548,2.57e-07,6;CL:0000136,3.63e-07,15|ontology_enrichment_development_v019=CL:0000514;3.61e-13;43!CL:0000355;1.71e-11;58|ontology_enrichment_disease=DOID:2394!1.26e-07!14|ontology_enrichment_disease_v019=DOID:2394;1.42e-09;14|ontology_enrichment_disease_v019_2=DOID:2394,5.56e-10,14|ontology_enrichment_uberon=UBERON:0001134!4.94e-21!61;UBERON:0002036!4.94e-21!61;UBERON:0003082!4.94e-21!61;UBERON:0002385!2.81e-20!63;UBERON:0001015!2.81e-20!63;UBERON:0000383!2.81e-20!63;UBERON:0004290!7.60e-19!70;UBERON:0000914!4.15e-17!83;UBERON:0002329!4.15e-17!83;UBERON:0003077!4.15e-17!83;UBERON:0003059!4.15e-17!83;UBERON:0007282!4.15e-17!83;UBERON:0009618!4.15e-17!83;UBERON:0007285!4.15e-17!83;UBERON:0000486!4.46e-14!82;UBERON:0005256!8.39e-14!143;UBERON:0000475!1.26e-12!365;UBERON:0000490!2.70e-12!138;UBERON:0004872!1.55e-11!84;UBERON:0002100!3.24e-11!216;UBERON:0000119!2.38e-10!312;UBERON:0003914!6.95e-10!118;UBERON:0002049!8.47e-10!79;UBERON:0007798!8.47e-10!79;UBERON:0004535!9.45e-10!110;UBERON:0000483!1.36e-09!309;UBERON:0001009!2.80e-09!113;UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0001637!1.86e-07!42;UBERON:0003509!1.86e-07!42;UBERON:0004572!1.86e-07!42;UBERON:0000481!1.96e-07!347;UBERON:0001048!4.39e-07!168;UBERON:0000948!4.41e-07!24;UBERON:0005498!4.41e-07!24;UBERON:0004140!4.41e-07!24;UBERON:0009881!4.41e-07!24;UBERON:0004141!4.41e-07!24;UBERON:0003084!4.41e-07!24;UBERON:0007005!4.41e-07!24;UBERON:0004139!4.41e-07!24;UBERON:0004291!4.41e-07!24;UBERON:0004573!7.11e-07!33;UBERON:0004571!7.11e-07!33;UBERON:0001981!9.63e-07!60;UBERON:0007500!9.63e-07!60;UBERON:0004537!9.63e-07!60;UBERON:0006965!9.63e-07!60|ontology_enrichment_uberon_v019=UBERON:0006876;1.73e-10;11!UBERON:0002385;7.38e-08;31!UBERON:0001015;7.38e-08;31!UBERON:0000383;7.38e-08;31!UBERON:0000948;1.12e-07;22!UBERON:0005284;1.41e-07;5!UBERON:0001637;1.91e-07;42!UBERON:0003509;1.91e-07;42!UBERON:0004572;1.91e-07;42!UBERON:0004573;2.70e-07;33!UBERON:0004571;2.70e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.07e-21,62;UBERON:0002036,3.07e-21,62;UBERON:0003082,3.07e-21,62;UBERON:0002385,3.81e-20,64;UBERON:0001015,3.81e-20,64;UBERON:0000383,3.81e-20,64;UBERON:0007524,4.56e-17,73;UBERON:0002329,7.82e-17,71;UBERON:0003059,7.82e-17,71;UBERON:0007282,7.82e-17,71;UBERON:0004290,7.82e-17,71;UBERON:0009618,7.82e-17,71;UBERON:0003077,2.04e-16,72;UBERON:0007285,2.04e-16,72;UBERON:0007503,3.75e-15,78;UBERON:0005256,1.76e-14,122;UBERON:0004535,2.14e-13,109;UBERON:0000486,2.20e-13,83;UBERON:0000490,4.04e-13,148;UBERON:0001009,1.22e-12,112;UBERON:0004872,1.95e-12,83;UBERON:0002049,1.42e-11,78;UBERON:0007798,1.42e-11,78;UBERON:0003914,3.83e-11,117;UBERON:0006876,1.14e-10,11;UBERON:0000119,3.07e-10,309;UBERON:0003104,3.14e-10,160;UBERON:0009142,3.14e-10,160;UBERON:0001637,7.44e-10,42;UBERON:0003509,7.44e-10,42;UBERON:0004572,7.44e-10,42;UBERON:0002100,2.17e-09,199;UBERON:0000483,2.72e-09,306;UBERON:0004573,4.91e-08,33;UBERON:0004571,4.91e-08,33;UBERON:0000948,6.37e-08,24;UBERON:0005498,6.37e-08,24;UBERON:0004140,6.37e-08,24;UBERON:0009881,6.37e-08,24;UBERON:0004141,6.37e-08,24;UBERON:0003084,6.37e-08,24;UBERON:0007005,6.37e-08,24;UBERON:0004139,6.37e-08,24;UBERON:0004291,6.37e-08,24;UBERON:0005284,1.61e-07,5;UBERON:0001048,2.05e-07,160;UBERON:0007500,3.62e-07,59;UBERON:0001981,3.62e-07,59;UBERON:0004537,3.62e-07,59;UBERON:0006965,3.62e-07,59|phase1_expression=0.54503513781167,1.07050261945492,3.24195129420734,0,1.78784437770915,0,7.59899634504932,1.89515962028049,1.30592814099919,0.245733936501509,0.697801167972428,0,0.527533956456907,0,0,2.6893005858071,1.20538905604795,3.65155045193687,2.92759679274304,2.58554221961255,2.2440076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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81792 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14605 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=78bp_to_ENST00000504830_5end | |||
|coexpression_cluster_id=C1960 | |||
|description=CAGE_peak_6_at_ADAMTS12_5end | |||
|id=chr5:33892204..33892218,- | |||
|ontology_enrichment_celltype=CL:0000055!1.55e-32!180;CL:0000183!1.04e-21!59;CL:0000187!1.55e-21!54;CL:0000680!1.04e-20!57;CL:0000056!1.04e-20!57;CL:0000355!1.04e-20!57;CL:0000393!6.40e-20!60;CL:0000211!6.40e-20!60;CL:0000057!5.81e-17!75;CL:0000192!2.54e-16!42;CL:0000514!2.54e-16!42;CL:0000359!1.60e-12!32;CL:0000222!2.27e-11!119;CL:0002494!1.13e-08!16;CL:0002334!8.62e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.64e-14;32!CL:0000187;2.35e-14;55!CL:0000192;3.61e-13;43!CL:0000393;7.36e-12;61!CL:0000211;7.36e-12;61!CL:0002494;1.83e-10;16!CL:0002334;2.24e-10;12!CL:0002548;2.78e-07;6!CL:0000136;4.27e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,4.80e-23,55;CL:0000680,3.70e-21,58;CL:0000056,3.70e-21,58;CL:0000355,3.70e-21,58;CL:0000393,1.39e-20,61;CL:0000211,1.39e-20,61;CL:0000192,1.73e-18,43;CL:0000514,1.73e-18,43;CL:0000359,1.57e-15,32;CL:0000048,2.10e-11,427;CL:0000723,8.36e-11,433;CL:0000034,8.77e-11,441;CL:0000057,1.00e-10,76;CL:0002494,2.02e-10,16;CL:0002334,4.16e-10,12;CL:0000222,2.20e-09,121;CL:0002548,2.57e-07,6;CL:0000136,3.63e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;3.61e-13;43!CL:0000355;1.71e-11;58 | |||
|ontology_enrichment_disease=DOID:2394!1.26e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.42e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.56e-10,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006876;1.73e-10;11!UBERON:0002385;7.38e-08;31!UBERON:0001015;7.38e-08;31!UBERON:0000383;7.38e-08;31!UBERON:0000948;1.12e-07;22!UBERON:0005284;1.41e-07;5!UBERON:0001637;1.91e-07;42!UBERON:0003509;1.91e-07;42!UBERON:0004572;1.91e-07;42!UBERON:0004573;2.70e-07;33!UBERON:0004571;2.70e-07;33 | |||
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| |||
|short_description=p6@ADAMTS12 | |||
}} |
Revision as of 15:28, 13 September 2013
Short description: | p6@ADAMTS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ADAMTS12_5end |
Coexpression cluster: | C1960_Mesenchymal_Smooth_cholangiocellular_hepatic_bile_Fibroblast_mesenchymal |
Association with transcript: | 78bp_to_ENST00000504830_5end |
EntrezGene: | ADAMTS12 |
HGNC: | 14605 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 4.80e-23 | 55 |
muscle precursor cell | 3.70e-21 | 58 |
myoblast | 3.70e-21 | 58 |
multi-potent skeletal muscle stem cell | 3.70e-21 | 58 |
electrically responsive cell | 1.39e-20 | 61 |
electrically active cell | 1.39e-20 | 61 |
smooth muscle cell | 1.73e-18 | 43 |
smooth muscle myoblast | 1.73e-18 | 43 |
vascular associated smooth muscle cell | 1.57e-15 | 32 |
multi fate stem cell | 2.10e-11 | 427 |
somatic stem cell | 8.36e-11 | 433 |
stem cell | 8.77e-11 | 441 |
fibroblast | 1.00e-10 | 76 |
cardiocyte | 2.02e-10 | 16 |
preadipocyte | 4.16e-10 | 12 |
mesodermal cell | 2.20e-09 | 121 |
cardiac fibroblast | 2.57e-07 | 6 |
fat cell | 3.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.56e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.