FFCP PHASE1:Mm9::chr1:22812833..22812846,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=116837|HGNC=|MCL_coexpression_id=39|UniProt=E9PWP6,Q99NE5,Q6BCW5|association_with_transcript=-270bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end|description=CAGE_peak_4_at_Rims1_5end|id=chr1:22812833..22812846,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.24e-20!52;UBERON:0005068!8.24e-20!52;UBERON:0006241!8.24e-20!52;UBERON:0007135!8.24e-20!52;UBERON:0000033!1.30e-19!63;UBERON:0002346!6.90e-19!71;UBERON:0003075!6.90e-19!71;UBERON:0007284!6.90e-19!71;UBERON:0003056!6.25e-18!49;UBERON:0000955!1.51e-17!50;UBERON:0006238!1.51e-17!50;UBERON:0002616!6.63e-17!49;UBERON:0001017!3.06e-15!73;UBERON:0005743!3.06e-15!73;UBERON:0000073!7.44e-15!75;UBERON:0001016!7.44e-15!75;UBERON:0002020!1.20e-14!34;UBERON:0003080!1.77e-14!40;UBERON:0004121!8.96e-14!102;UBERON:0000924!8.96e-14!102;UBERON:0006601!8.96e-14!102;UBERON:0002780!9.11e-14!39;UBERON:0001890!9.11e-14!39;UBERON:0006240!9.11e-14!39;UBERON:0002791!9.08e-12!29;UBERON:0003528!9.08e-12!29;UBERON:0001893!9.08e-12!29;UBERON:0007811!2.39e-10!86;UBERON:0002021!6.06e-10!10;UBERON:0000411!6.06e-10!10;UBERON:0001950!6.06e-10!10;UBERON:0000153!1.57e-08!94;UBERON:0000025!3.36e-08!114;UBERON:0002619!3.93e-08!17;UBERON:0004111!8.55e-08!122;UBERON:0000956!1.15e-07!21;UBERON:0001869!1.15e-07!21;UBERON:0000203!1.15e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.57e-35,10;UBERON:0000411,7.57e-35,10;UBERON:0001950,7.57e-35,10;UBERON:0000073,2.14e-30,54;UBERON:0002616,6.45e-30,46;UBERON:0000955,3.37e-29,47;UBERON:0006238,3.37e-29,47;UBERON:0001049,1.16e-28,52;UBERON:0005068,1.16e-28,52;UBERON:0006241,1.16e-28,52;UBERON:0007135,1.16e-28,52;UBERON:0003080,5.99e-25,40;UBERON:0003528,1.47e-24,29;UBERON:0002791,1.47e-24,29;UBERON:0001893,1.47e-24,29;UBERON:0002619,9.42e-24,17;UBERON:0001017,1.65e-23,73;UBERON:0002780,8.56e-23,39;UBERON:0001890,8.56e-23,39;UBERON:0006240,8.56e-23,39;UBERON:0001016,9.03e-23,75;UBERON:0000956,1.26e-22,21;UBERON:0001869,1.26e-22,21;UBERON:0000203,1.26e-22,21;UBERON:0002346,1.51e-22,64;UBERON:0003075,1.51e-22,64;UBERON:0007284,1.51e-22,64;UBERON:0002020,1.61e-20,34;UBERON:0003056,9.91e-20,49;UBERON:0010371,2.83e-19,73;UBERON:0004121,4.23e-17,95;UBERON:0000924,4.23e-17,95;UBERON:0006601,4.23e-17,95;UBERON:0010314,1.86e-14,92;UBERON:0000025,7.12e-11,114;UBERON:0004111,6.88e-10,122;UBERON:0002950,6.41e-08,4;UBERON:0001891,6.41e-08,4;UBERON:0009616,6.41e-08,4;UBERON:0010286,6.41e-08,4|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.883474163806454,0.244981598429908,0,0,0,2.55374676170375,2.30409799884365,0.395658863190582,0.0914876436024097,1.04182674111352,0.837548997004143,2.25105044012672,1.68078072554491,0.883885756421003,0.427115042397309,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,4.68449275218475,11.1006754611131,0,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,4.69325664519146,5.8814555185976,1.87009240103604,2.43361894601636,0.101839363850316,0.124406970610093,0,0.841767423545896,0.650602214813519,0.689706313300419,0.360124259610698,0.30140963567143,0.476255494059295,0,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,1.68231958851302,0.205809224758569,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.478364305972461,0,0.518054945597687,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0,0.477937595905104,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0.488660878060728,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.857348140126369,0.532020700926821,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0,0,0,0.477489376012546,0.164140899745061,0,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0,0,0.269728692769641,0.495920734352016,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,3.3885110557024,2.76195141904306,4.58316410751517,4.46818274093588,3.42541259885321,4.5323633843382,5.40018000185445,6.30449684513909,3.17199686288943,6.21312374102184,0.207574695168353,0,0.341467211508268,0.486213434136588,0.209613162627982,0.551530525350042,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.384150914429216,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264|short_description=p4@Rims1}} | ||
|EntrezGene=116837 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=E9PWP6,Q99NE5,Q6BCW5 | |||
|association_with_transcript=-270bp_to_ENSMUST00000097808,NM_001012623,NM_001012624,NM_001012625,NM_053270,NM_183018,uc007als.1,uc007alt.1,uc007alu.1,uc007alv.1,uc007alw.1,uc007aly.1_5end | |||
|description=CAGE_peak_4_at_Rims1_5end | |||
|id=chr1:22812833..22812846,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.24e-20!52;UBERON:0005068!8.24e-20!52;UBERON:0006241!8.24e-20!52;UBERON:0007135!8.24e-20!52;UBERON:0000033!1.30e-19!63;UBERON:0002346!6.90e-19!71;UBERON:0003075!6.90e-19!71;UBERON:0007284!6.90e-19!71;UBERON:0003056!6.25e-18!49;UBERON:0000955!1.51e-17!50;UBERON:0006238!1.51e-17!50;UBERON:0002616!6.63e-17!49;UBERON:0001017!3.06e-15!73;UBERON:0005743!3.06e-15!73;UBERON:0000073!7.44e-15!75;UBERON:0001016!7.44e-15!75;UBERON:0002020!1.20e-14!34;UBERON:0003080!1.77e-14!40;UBERON:0004121!8.96e-14!102;UBERON:0000924!8.96e-14!102;UBERON:0006601!8.96e-14!102;UBERON:0002780!9.11e-14!39;UBERON:0001890!9.11e-14!39;UBERON:0006240!9.11e-14!39;UBERON:0002791!9.08e-12!29;UBERON:0003528!9.08e-12!29;UBERON:0001893!9.08e-12!29;UBERON:0007811!2.39e-10!86;UBERON:0002021!6.06e-10!10;UBERON:0000411!6.06e-10!10;UBERON:0001950!6.06e-10!10;UBERON:0000153!1.57e-08!94;UBERON:0000025!3.36e-08!114;UBERON:0002619!3.93e-08!17;UBERON:0004111!8.55e-08!122;UBERON:0000956!1.15e-07!21;UBERON:0001869!1.15e-07!21;UBERON:0000203!1.15e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.57e-35,10;UBERON:0000411,7.57e-35,10;UBERON:0001950,7.57e-35,10;UBERON:0000073,2.14e-30,54;UBERON:0002616,6.45e-30,46;UBERON:0000955,3.37e-29,47;UBERON:0006238,3.37e-29,47;UBERON:0001049,1.16e-28,52;UBERON:0005068,1.16e-28,52;UBERON:0006241,1.16e-28,52;UBERON:0007135,1.16e-28,52;UBERON:0003080,5.99e-25,40;UBERON:0003528,1.47e-24,29;UBERON:0002791,1.47e-24,29;UBERON:0001893,1.47e-24,29;UBERON:0002619,9.42e-24,17;UBERON:0001017,1.65e-23,73;UBERON:0002780,8.56e-23,39;UBERON:0001890,8.56e-23,39;UBERON:0006240,8.56e-23,39;UBERON:0001016,9.03e-23,75;UBERON:0000956,1.26e-22,21;UBERON:0001869,1.26e-22,21;UBERON:0000203,1.26e-22,21;UBERON:0002346,1.51e-22,64;UBERON:0003075,1.51e-22,64;UBERON:0007284,1.51e-22,64;UBERON:0002020,1.61e-20,34;UBERON:0003056,9.91e-20,49;UBERON:0010371,2.83e-19,73;UBERON:0004121,4.23e-17,95;UBERON:0000924,4.23e-17,95;UBERON:0006601,4.23e-17,95;UBERON:0010314,1.86e-14,92;UBERON:0000025,7.12e-11,114;UBERON:0004111,6.88e-10,122;UBERON:0002950,6.41e-08,4;UBERON:0001891,6.41e-08,4;UBERON:0009616,6.41e-08,4;UBERON:0010286,6.41e-08,4 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0.571301968807607,0.883474163806454,0.244981598429908,0,0,0,2.55374676170375,2.30409799884365,0.395658863190582,0.0914876436024097,1.04182674111352,0.837548997004143,2.25105044012672,1.68078072554491,0.883885756421003,0.427115042397309,0.372798891650601,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0,0,0.484875253135222,0,4.68449275218475,11.1006754611131,0,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,4.69325664519146,5.8814555185976,1.87009240103604,2.43361894601636,0.101839363850316,0.124406970610093,0,0.841767423545896,0.650602214813519,0.689706313300419,0.360124259610698,0.30140963567143,0.476255494059295,0,0.281105173679186,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.462801338662135,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,1.68231958851302,0.205809224758569,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0.390267295715598,0.630540576424764,0.44292937929755,0.478364305972461,0,0.518054945597687,0,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0,0.477937595905104,0,0,0.404810701674894,0,0,0.642642632843614,0,0,0.488660878060728,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.857348140126369,0.532020700926821,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0,0,0,0.477489376012546,0.164140899745061,0,1.11255181206306,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0,0,0.269728692769641,0.495920734352016,0,0,0,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,3.3885110557024,2.76195141904306,4.58316410751517,4.46818274093588,3.42541259885321,4.5323633843382,5.40018000185445,6.30449684513909,3.17199686288943,6.21312374102184,0.207574695168353,0,0.341467211508268,0.486213434136588,0.209613162627982,0.551530525350042,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.384150914429216,0.0574354689556133,0,0.231768651889711,0,0,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | |||
|short_description=p4@Rims1 | |||
}} |
Revision as of 20:11, 13 September 2013
Short description: | p4@Rims1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rims1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -270bp_to_ENSMUST00000097808, NM_001012623, NM_001012624, NM_001012625, NM_053270, NM_183018, uc007als.1, uc007alt.1, uc007alu.1, uc007alv.1, uc007alw.1, uc007aly.1_5end |
EntrezGene: | Rims1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.