FFCP PHASE1:Mm9::chr1:75188256..75188309,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245860|HGNC=|MCL_coexpression_id=0|UniProt=Q8BRS1|association_with_transcript=0bp_to_ENSMUST00000165703_5end|description=CAGE_peak_3_at_Atg9a_5end|id=chr1:75188256..75188309,-|ontology_enrichment_celltype=CL:0000117!1.08e-11!23;CL:0000337!1.08e-11!23;CL:0002319!1.93e-11!43;CL:0000221!3.67e-11!44;CL:0000133!3.67e-11!44;CL:0000540!1.09e-10!33;CL:0000047!1.09e-10!33;CL:0000031!1.09e-10!33;CL:0000404!1.09e-10!33;CL:0000055!1.80e-10!50;CL:0000393!9.54e-10!39;CL:0000211!9.54e-10!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.21e-13,23;CL:0000337,3.21e-13,23;CL:0002319,1.89e-12,43;CL:0000221,8.46e-12,44;CL:0000133,8.46e-12,44;CL:0000540,1.62e-11,33;CL:0000047,1.62e-11,33;CL:0000031,1.62e-11,33;CL:0000404,1.62e-11,33;CL:0000393,4.73e-10,39;CL:0000211,4.73e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.33e-26!73;UBERON:0005743!2.33e-26!73;UBERON:0000073!7.63e-25!75;UBERON:0001016!7.63e-25!75;UBERON:0001049!1.45e-21!52;UBERON:0005068!1.45e-21!52;UBERON:0006241!1.45e-21!52;UBERON:0007135!1.45e-21!52;UBERON:0000955!1.16e-20!50;UBERON:0006238!1.16e-20!50;UBERON:0002616!3.35e-20!49;UBERON:0000033!8.46e-19!63;UBERON:0004121!5.07e-18!102;UBERON:0000924!5.07e-18!102;UBERON:0006601!5.07e-18!102;UBERON:0002020!1.46e-17!34;UBERON:0002346!5.79e-17!71;UBERON:0003075!5.79e-17!71;UBERON:0007284!5.79e-17!71;UBERON:0003080!1.18e-15!40;UBERON:0002780!3.74e-15!39;UBERON:0001890!3.74e-15!39;UBERON:0006240!3.74e-15!39;UBERON:0003056!6.27e-15!49;UBERON:0002791!7.38e-15!29;UBERON:0003528!7.38e-15!29;UBERON:0001893!7.38e-15!29;UBERON:0000956!7.45e-11!21;UBERON:0001869!7.45e-11!21;UBERON:0000203!7.45e-11!21;UBERON:0000025!3.43e-09!114;UBERON:0002619!4.31e-09!17;UBERON:0000153!9.89e-09!94;UBERON:0004111!1.54e-08!122;UBERON:0007811!2.15e-08!86;UBERON:0002021!1.62e-07!10;UBERON:0000411!1.62e-07!10;UBERON:0001950!1.62e-07!10;UBERON:0000475!7.41e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.47e-29,73;UBERON:0001016,1.18e-27,75;UBERON:0000073,3.37e-26,54;UBERON:0001049,1.87e-24,52;UBERON:0005068,1.87e-24,52;UBERON:0006241,1.87e-24,52;UBERON:0007135,1.87e-24,52;UBERON:0002346,2.12e-22,64;UBERON:0003075,2.12e-22,64;UBERON:0007284,2.12e-22,64;UBERON:0004121,7.18e-22,95;UBERON:0000924,7.18e-22,95;UBERON:0006601,7.18e-22,95;UBERON:0000955,2.75e-21,47;UBERON:0006238,2.75e-21,47;UBERON:0002616,9.09e-21,46;UBERON:0002020,5.61e-20,34;UBERON:0003080,1.18e-17,40;UBERON:0002780,4.45e-17,39;UBERON:0001890,4.45e-17,39;UBERON:0006240,4.45e-17,39;UBERON:0010371,5.09e-17,73;UBERON:0003528,7.31e-17,29;UBERON:0002791,7.31e-17,29;UBERON:0001893,7.31e-17,29;UBERON:0003056,5.39e-16,49;UBERON:0010314,2.55e-14,92;UBERON:0000956,2.96e-12,21;UBERON:0001869,2.96e-12,21;UBERON:0000203,2.96e-12,21;UBERON:0002619,3.15e-10,17;UBERON:0000025,1.17e-08,114;UBERON:0002021,2.03e-08,10;UBERON:0000411,2.03e-08,10;UBERON:0001950,2.03e-08,10;UBERON:0004111,1.41e-07,122;UBERON:0003076,2.04e-07,12;UBERON:0003057,2.04e-07,12|phase1_expression=0.80074423552397,0.697950815278722,1.81999695755814,0.30246421130683,0,0.839396359559449,0.700837921786577,0.516493293766305,0,0,0,0,0.171200729931206,0.174840804837995,1.33243904726265,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0,69.2252381829708,0,0,0.159992422793407,0.45881856213434,0.57423196411502,0.86152399231815,0.861884930743556,0.380046838912748,0.756090389279792,0.443461021310609,1.90509202037889,5.53558308826113,0,0.866554859253824,0.332469290716985,0.204169356262369,3.34825304589526,1.5626706890476,1.0470474879476,2.94115744015507,1.36609096991689,1.94204141212461,0.377690453926732,0.811015449756117,1.83546752161682,3.9119567217402,2.39827672018491,1.5378032791413,1.1665793944457,1.95980990275508,1.43752564364972,0.167782606057736,0,0,0.771778308107841,1.43266719969378,1.54701627683233,3.64169629547276,3.70293685490423,3.1691570175309,1.35537812827653,0,0,0.988866362566974,0,2.09720077362883,5.37905627450176,2.38486108309499,3.91517221161903,2.73422449756797,6.85562362569129,2.87129103237098,2.08234358665422,2.30029130443767,2.75765635983006,5.50579404996943,5.36286819957788,6.29786786350598,3.16527090552465,3.84248103130121,3.64639359389732,4.4669279840221,4.50210088025344,4.12555268997387,5.59794312399969,5.26775218956681,3.91438836233131,0.454357159999104,0.529000920747499,0.289864488701678,0.860423876981386,0.679971333707751,0,0.649776417447669,0.896053774194671,8.84799846830037,1.53387290320252,0.519572009205738,0.70667914902068,0.845060518660083,0,0,0,0.432982082022428,0.506719730950197,0,10.2765491747154,0.258937883647172,0.148442139064825,1.04091196059682,0.913396434936424,0.691846491768175,0.60289056221049,0.705532242814229,0.125666591329675,1.48316980640624,0.433798070759735,2.65383165584962,0.647067399789637,0.662524555381181,0.484875253135222,0,2.63502717310392,3.14170060220183,1.02182822083437,0.11981512450592,1.19980546198682,0.127070227073065,3.89455662452539,4.11750542536764,5.40313714085317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| ||
|EntrezGene=245860 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q8BRS1 | |||
|association_with_transcript=0bp_to_ENSMUST00000165703_5end | |||
|description=CAGE_peak_3_at_Atg9a_5end | |||
|id=chr1:75188256..75188309,- | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-11!23;CL:0000337!1.08e-11!23;CL:0002319!1.93e-11!43;CL:0000221!3.67e-11!44;CL:0000133!3.67e-11!44;CL:0000540!1.09e-10!33;CL:0000047!1.09e-10!33;CL:0000031!1.09e-10!33;CL:0000404!1.09e-10!33;CL:0000055!1.80e-10!50;CL:0000393!9.54e-10!39;CL:0000211!9.54e-10!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.21e-13,23;CL:0000337,3.21e-13,23;CL:0002319,1.89e-12,43;CL:0000221,8.46e-12,44;CL:0000133,8.46e-12,44;CL:0000540,1.62e-11,33;CL:0000047,1.62e-11,33;CL:0000031,1.62e-11,33;CL:0000404,1.62e-11,33;CL:0000393,4.73e-10,39;CL:0000211,4.73e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.33e-26!73;UBERON:0005743!2.33e-26!73;UBERON:0000073!7.63e-25!75;UBERON:0001016!7.63e-25!75;UBERON:0001049!1.45e-21!52;UBERON:0005068!1.45e-21!52;UBERON:0006241!1.45e-21!52;UBERON:0007135!1.45e-21!52;UBERON:0000955!1.16e-20!50;UBERON:0006238!1.16e-20!50;UBERON:0002616!3.35e-20!49;UBERON:0000033!8.46e-19!63;UBERON:0004121!5.07e-18!102;UBERON:0000924!5.07e-18!102;UBERON:0006601!5.07e-18!102;UBERON:0002020!1.46e-17!34;UBERON:0002346!5.79e-17!71;UBERON:0003075!5.79e-17!71;UBERON:0007284!5.79e-17!71;UBERON:0003080!1.18e-15!40;UBERON:0002780!3.74e-15!39;UBERON:0001890!3.74e-15!39;UBERON:0006240!3.74e-15!39;UBERON:0003056!6.27e-15!49;UBERON:0002791!7.38e-15!29;UBERON:0003528!7.38e-15!29;UBERON:0001893!7.38e-15!29;UBERON:0000956!7.45e-11!21;UBERON:0001869!7.45e-11!21;UBERON:0000203!7.45e-11!21;UBERON:0000025!3.43e-09!114;UBERON:0002619!4.31e-09!17;UBERON:0000153!9.89e-09!94;UBERON:0004111!1.54e-08!122;UBERON:0007811!2.15e-08!86;UBERON:0002021!1.62e-07!10;UBERON:0000411!1.62e-07!10;UBERON:0001950!1.62e-07!10;UBERON:0000475!7.41e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.47e-29,73;UBERON:0001016,1.18e-27,75;UBERON:0000073,3.37e-26,54;UBERON:0001049,1.87e-24,52;UBERON:0005068,1.87e-24,52;UBERON:0006241,1.87e-24,52;UBERON:0007135,1.87e-24,52;UBERON:0002346,2.12e-22,64;UBERON:0003075,2.12e-22,64;UBERON:0007284,2.12e-22,64;UBERON:0004121,7.18e-22,95;UBERON:0000924,7.18e-22,95;UBERON:0006601,7.18e-22,95;UBERON:0000955,2.75e-21,47;UBERON:0006238,2.75e-21,47;UBERON:0002616,9.09e-21,46;UBERON:0002020,5.61e-20,34;UBERON:0003080,1.18e-17,40;UBERON:0002780,4.45e-17,39;UBERON:0001890,4.45e-17,39;UBERON:0006240,4.45e-17,39;UBERON:0010371,5.09e-17,73;UBERON:0003528,7.31e-17,29;UBERON:0002791,7.31e-17,29;UBERON:0001893,7.31e-17,29;UBERON:0003056,5.39e-16,49;UBERON:0010314,2.55e-14,92;UBERON:0000956,2.96e-12,21;UBERON:0001869,2.96e-12,21;UBERON:0000203,2.96e-12,21;UBERON:0002619,3.15e-10,17;UBERON:0000025,1.17e-08,114;UBERON:0002021,2.03e-08,10;UBERON:0000411,2.03e-08,10;UBERON:0001950,2.03e-08,10;UBERON:0004111,1.41e-07,122;UBERON:0003076,2.04e-07,12;UBERON:0003057,2.04e-07,12 | |||
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| |||
|short_description=p3@Atg9a | |||
}} |
Revision as of 20:58, 13 September 2013
Short description: | p3@Atg9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atg9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000165703_5end |
EntrezGene: | Atg9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.21e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-13 | 23 |
neural cell | 1.89e-12 | 43 |
ectodermal cell | 8.46e-12 | 44 |
neurectodermal cell | 8.46e-12 | 44 |
neuron | 1.62e-11 | 33 |
neuronal stem cell | 1.62e-11 | 33 |
neuroblast | 1.62e-11 | 33 |
electrically signaling cell | 1.62e-11 | 33 |
electrically responsive cell | 4.73e-10 | 39 |
electrically active cell | 4.73e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.