FFCP PHASE1:Mm9::chr1:99944305..99944369,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78603,18484|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=0bp_to_ENSMUST00000159324,ENSMUST00000161661,NR_037993,uc007cfs.1_5end|description=CAGE_peak_13_at_Pam_5end,CAGE_peak_1_at_B230216N24Rik_5end|id=chr1:99944305..99944369,-|ontology_enrichment_celltype=CL:0000540!2.99e-14!33;CL:0000047!2.99e-14!33;CL:0000031!2.99e-14!33;CL:0000404!2.99e-14!33;CL:0000117!4.19e-11!23;CL:0000337!4.19e-11!23;CL:0002319!1.03e-10!43;CL:0000221!4.05e-10!44;CL:0000133!4.05e-10!44;CL:0000393!9.14e-10!39;CL:0000211!9.14e-10!39;CL:0000055!3.57e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,8.23e-16,33;CL:0000047,8.23e-16,33;CL:0000031,8.23e-16,33;CL:0000404,8.23e-16,33;CL:0000393,6.13e-12,39;CL:0000211,6.13e-12,39;CL:0000117,5.28e-11,23;CL:0000337,5.28e-11,23;CL:0002319,5.29e-10,43;CL:0000221,1.40e-09,44;CL:0000133,1.40e-09,44;CL:0000107,6.75e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.73e-28!73;UBERON:0005743!1.73e-28!73;UBERON:0000073!2.43e-28!75;UBERON:0001016!2.43e-28!75;UBERON:0004121!7.32e-25!102;UBERON:0000924!7.32e-25!102;UBERON:0006601!7.32e-25!102;UBERON:0002346!1.83e-24!71;UBERON:0003075!1.83e-24!71;UBERON:0007284!1.83e-24!71;UBERON:0001049!5.25e-23!52;UBERON:0005068!5.25e-23!52;UBERON:0006241!5.25e-23!52;UBERON:0007135!5.25e-23!52;UBERON:0000955!7.85e-22!50;UBERON:0006238!7.85e-22!50;UBERON:0002616!3.35e-21!49;UBERON:0003080!1.15e-20!40;UBERON:0002780!5.59e-20!39;UBERON:0001890!5.59e-20!39;UBERON:0006240!5.59e-20!39;UBERON:0003056!1.18e-17!49;UBERON:0002020!1.24e-17!34;UBERON:0000033!5.02e-17!63;UBERON:0002791!8.34e-15!29;UBERON:0003528!8.34e-15!29;UBERON:0001893!8.34e-15!29;UBERON:0000956!5.89e-10!21;UBERON:0001869!5.89e-10!21;UBERON:0000203!5.89e-10!21;UBERON:0002619!2.17e-09!17;UBERON:0002021!4.91e-09!10;UBERON:0000411!4.91e-09!10;UBERON:0001950!4.91e-09!10;UBERON:0007811!6.59e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-32,73;UBERON:0001016,5.59e-31,75;UBERON:0000073,3.51e-25,54;UBERON:0001049,1.44e-23,52;UBERON:0005068,1.44e-23,52;UBERON:0006241,1.44e-23,52;UBERON:0007135,1.44e-23,52;UBERON:0003080,1.81e-20,40;UBERON:0004121,2.97e-20,95;UBERON:0000924,2.97e-20,95;UBERON:0006601,2.97e-20,95;UBERON:0002346,1.17e-19,64;UBERON:0003075,1.17e-19,64;UBERON:0007284,1.17e-19,64;UBERON:0000955,1.20e-19,47;UBERON:0006238,1.20e-19,47;UBERON:0002780,1.42e-19,39;UBERON:0001890,1.42e-19,39;UBERON:0006240,1.42e-19,39;UBERON:0002616,7.52e-19,46;UBERON:0002020,3.84e-18,34;UBERON:0010371,2.33e-15,73;UBERON:0003056,1.61e-14,49;UBERON:0003528,2.33e-14,29;UBERON:0002791,2.33e-14,29;UBERON:0001893,2.33e-14,29;UBERON:0010314,2.73e-13,92;UBERON:0002021,3.69e-12,10;UBERON:0000411,3.69e-12,10;UBERON:0001950,3.69e-12,10;UBERON:0002619,2.01e-09,17;UBERON:0011216,2.60e-08,194;UBERON:0002420,3.46e-08,8;UBERON:0007245,3.46e-08,8;UBERON:0010009,3.46e-08,8;UBERON:0010011,3.46e-08,8;UBERON:0000454,3.46e-08,8;UBERON:0000956,3.80e-08,21;UBERON:0001869,3.80e-08,21;UBERON:0000203,3.80e-08,21;UBERON:0002410,6.75e-07,9|phase1_expression=0,0,0,0,0,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,6.47412674750713,13.2247744818008,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.841299845405528,2.57085885963423,3.97563373712904,0.61245399607477,0.287536413054709,1.83843757322004,6.60695285996332,4.21368215681119,4.91540906419979,11.0784481693363,9.33173964744578,7.8137005583514,7.53794097303729,24.1987922313622,11.4598685832608,9.1334861496837,6.83384067835694,3.91438836233131,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,3.29622120855658,4.87144765299426,2.53677046981664,4.82312449768392,6.11461277105665,0.376999773989026,0,0.144599356919912,0,0,0,0,3.72783522436244,0,0.41889341362691,0.510914110417183,0,0,0,8.23848516726525,4.11750542536764,2.26177833803156,25.5521750682646,27.872984849006,5.81806524766768,8.4365456795234,0.611036183101898,0,0,0,0.130120442962704,0.459804208866946,0.360124259610698,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0,0,0,0,0.134206418760372,8.20130799400096,1.85228302282712,0,1.85115396664481,1.06644125267617,0.232236671860439,0.644337306610467,1.4117846723634,0.667134131534611,1.52180500890047,0.949058123089023,2.14108641141214,1.50801125280162,1.98956472041151,1.36474860983384,0,0.864552199498777,0.597423819763102,1.13800740571849,0.685491075658373,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0.476087281772027,0.39026729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| ||
|EntrezGene=78603,18484 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000159324,ENSMUST00000161661,NR_037993,uc007cfs.1_5end | |||
|description=CAGE_peak_13_at_Pam_5end,CAGE_peak_1_at_B230216N24Rik_5end | |||
|id=chr1:99944305..99944369,- | |||
|ontology_enrichment_celltype=CL:0000540!2.99e-14!33;CL:0000047!2.99e-14!33;CL:0000031!2.99e-14!33;CL:0000404!2.99e-14!33;CL:0000117!4.19e-11!23;CL:0000337!4.19e-11!23;CL:0002319!1.03e-10!43;CL:0000221!4.05e-10!44;CL:0000133!4.05e-10!44;CL:0000393!9.14e-10!39;CL:0000211!9.14e-10!39;CL:0000055!3.57e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.23e-16,33;CL:0000047,8.23e-16,33;CL:0000031,8.23e-16,33;CL:0000404,8.23e-16,33;CL:0000393,6.13e-12,39;CL:0000211,6.13e-12,39;CL:0000117,5.28e-11,23;CL:0000337,5.28e-11,23;CL:0002319,5.29e-10,43;CL:0000221,1.40e-09,44;CL:0000133,1.40e-09,44;CL:0000107,6.75e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.73e-28!73;UBERON:0005743!1.73e-28!73;UBERON:0000073!2.43e-28!75;UBERON:0001016!2.43e-28!75;UBERON:0004121!7.32e-25!102;UBERON:0000924!7.32e-25!102;UBERON:0006601!7.32e-25!102;UBERON:0002346!1.83e-24!71;UBERON:0003075!1.83e-24!71;UBERON:0007284!1.83e-24!71;UBERON:0001049!5.25e-23!52;UBERON:0005068!5.25e-23!52;UBERON:0006241!5.25e-23!52;UBERON:0007135!5.25e-23!52;UBERON:0000955!7.85e-22!50;UBERON:0006238!7.85e-22!50;UBERON:0002616!3.35e-21!49;UBERON:0003080!1.15e-20!40;UBERON:0002780!5.59e-20!39;UBERON:0001890!5.59e-20!39;UBERON:0006240!5.59e-20!39;UBERON:0003056!1.18e-17!49;UBERON:0002020!1.24e-17!34;UBERON:0000033!5.02e-17!63;UBERON:0002791!8.34e-15!29;UBERON:0003528!8.34e-15!29;UBERON:0001893!8.34e-15!29;UBERON:0000956!5.89e-10!21;UBERON:0001869!5.89e-10!21;UBERON:0000203!5.89e-10!21;UBERON:0002619!2.17e-09!17;UBERON:0002021!4.91e-09!10;UBERON:0000411!4.91e-09!10;UBERON:0001950!4.91e-09!10;UBERON:0007811!6.59e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.17e-32,73;UBERON:0001016,5.59e-31,75;UBERON:0000073,3.51e-25,54;UBERON:0001049,1.44e-23,52;UBERON:0005068,1.44e-23,52;UBERON:0006241,1.44e-23,52;UBERON:0007135,1.44e-23,52;UBERON:0003080,1.81e-20,40;UBERON:0004121,2.97e-20,95;UBERON:0000924,2.97e-20,95;UBERON:0006601,2.97e-20,95;UBERON:0002346,1.17e-19,64;UBERON:0003075,1.17e-19,64;UBERON:0007284,1.17e-19,64;UBERON:0000955,1.20e-19,47;UBERON:0006238,1.20e-19,47;UBERON:0002780,1.42e-19,39;UBERON:0001890,1.42e-19,39;UBERON:0006240,1.42e-19,39;UBERON:0002616,7.52e-19,46;UBERON:0002020,3.84e-18,34;UBERON:0010371,2.33e-15,73;UBERON:0003056,1.61e-14,49;UBERON:0003528,2.33e-14,29;UBERON:0002791,2.33e-14,29;UBERON:0001893,2.33e-14,29;UBERON:0010314,2.73e-13,92;UBERON:0002021,3.69e-12,10;UBERON:0000411,3.69e-12,10;UBERON:0001950,3.69e-12,10;UBERON:0002619,2.01e-09,17;UBERON:0011216,2.60e-08,194;UBERON:0002420,3.46e-08,8;UBERON:0007245,3.46e-08,8;UBERON:0010009,3.46e-08,8;UBERON:0010011,3.46e-08,8;UBERON:0000454,3.46e-08,8;UBERON:0000956,3.80e-08,21;UBERON:0001869,3.80e-08,21;UBERON:0000203,3.80e-08,21;UBERON:0002410,6.75e-07,9 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,6.47412674750713,13.2247744818008,3.80298842103708,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.841299845405528,2.57085885963423,3.97563373712904,0.61245399607477,0.287536413054709,1.83843757322004,6.60695285996332,4.21368215681119,4.91540906419979,11.0784481693363,9.33173964744578,7.8137005583514,7.53794097303729,24.1987922313622,11.4598685832608,9.1334861496837,6.83384067835694,3.91438836233131,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,3.29622120855658,4.87144765299426,2.53677046981664,4.82312449768392,6.11461277105665,0.376999773989026,0,0.144599356919912,0,0,0,0,3.72783522436244,0,0.41889341362691,0.510914110417183,0,0,0,8.23848516726525,4.11750542536764,2.26177833803156,25.5521750682646,27.872984849006,5.81806524766768,8.4365456795234,0.611036183101898,0,0,0,0.130120442962704,0.459804208866946,0.360124259610698,0.30140963567143,0.340182495756639,0.384341160854549,0.281105173679186,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.329119699826961,0,0,0,0,0.134206418760372,8.20130799400096,1.85228302282712,0,1.85115396664481,1.06644125267617,0.232236671860439,0.644337306610467,1.4117846723634,0.667134131534611,1.52180500890047,0.949058123089023,2.14108641141214,1.50801125280162,1.98956472041151,1.36474860983384,0,0.864552199498777,0.597423819763102,1.13800740571849,0.685491075658373,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0.476087281772027,0.390267295715598,0,0,0.159454768657487,0,0,0,0,0,0,0,3.05046120976805,3.7507739709505,0,0,2.52406575533005,3.90438744296638,1.50796378412959,2.38968797952552,3.34198011123591,3.67999490025482,2.02405350837447,7.3063964477828,2.76701444562566,6.10510501201433,0,0.178065603667255,0.325773918707152,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0.590603785761546,0,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,13.2771446243977,0.540183282093931,0.776152102696527,4.28674070063185,5.14286677562593,6.0645397984704,13.657568709976,31.3598897588037,0,0,0.882113592219848,0.16488625294148,0.161464426695906,0,0.477489376012546,0.656563598980245,1.45740418314925,6.30446026835733,0,0,0,0,0,0,0,0,0,0,1.10717597753397,2.03319467126849,1.62008011232702,1.46361807210128,1.31017538247707,1.61837215661785,2.23164330458407,0.785267825952089,1.16653475962614,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0,0,0.214368379079066,0,36.1441179274923,29.4608151364593,31.5092532391668,31.1054260042075,41.7900337060092,32.4819375877571,34.4261475118221,36.0256962579376,30.8136838109259,32.1011393286128,0.830298780673413,1.19707462020309,1.87806966329548,0.486213434136588,0.419226325255965,0.367687016900028,2.22246727801615,1.64828045791115,0.962757628775446,2.27427490587418,1.77435509923168,1.50901073108861,0.842773567228942,1.15245274328765,1.14870937911227,1.42888107384922,0.695305955669133,0.964546102318525,0.824171801606613,1.17759136107518,1.71434626192708,1.4198064492747,0.953744759789284,1.0174249164263,1.50575008664529,1.18460451048347,1.46342378298218,1.05227884575137,0.679020569229309,1.12228454331548,0.711810108745045,1.47756723563345,1.22769312950907,1.70430525304563,0.964533054905707,2.74791635731741,1.63752125911786,0.644613162144895,0.765153328275374,0.661774257358546,0 | |||
|short_description=p13@Pam,p1@B230216N24Rik | |||
}} |
Revision as of 21:24, 13 September 2013
Short description: | p13@Pam, p1@B230216N24Rik |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Pam_5end, CAGE_peak_1_at_B230216N24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000159324, ENSMUST00000161661, NR_037993, uc007cfs.1_5end |
EntrezGene: | 78603,18484 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.23e-16 | 33 |
neuronal stem cell | 8.23e-16 | 33 |
neuroblast | 8.23e-16 | 33 |
electrically signaling cell | 8.23e-16 | 33 |
electrically responsive cell | 6.13e-12 | 39 |
electrically active cell | 6.13e-12 | 39 |
CNS neuron (sensu Vertebrata) | 5.28e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.28e-11 | 23 |
neural cell | 5.29e-10 | 43 |
ectodermal cell | 1.40e-09 | 44 |
neurectodermal cell | 1.40e-09 | 44 |
autonomic neuron | 6.75e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.