FFCP PHASE1:Mm9::chr2:181501745..181501778,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17932|HGNC=|MCL_coexpression_id=367|UniProt=Q8CFC2|association_with_transcript=0bp_to_ENSMUST00000108756_5end|description=CAGE_peak_1_at_Myt1_5end|id=chr2:181501745..181501778,+|ontology_enrichment_celltype=CL:0000540!2.61e-19!33;CL:0000047!2.61e-19!33;CL:0000031!2.61e-19!33;CL:0000404!2.61e-19!33;CL:0000117!1.29e-16!23;CL:0000337!1.29e-16!23;CL:0000221!3.88e-14!44;CL:0000133!3.88e-14!44;CL:0002319!4.43e-14!43;CL:0000393!6.79e-14!39;CL:0000211!6.79e-14!39;CL:0000055!5.92e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.27e-27,33;CL:0000047,7.27e-27,33;CL:0000031,7.27e-27,33;CL:0000404,7.27e-27,33;CL:0000117,1.06e-22,23;CL:0000337,1.06e-22,23;CL:0000393,6.43e-21,39;CL:0000211,6.43e-21,39;CL:0002319,5.46e-19,43;CL:0000221,2.71e-18,44;CL:0000133,2.71e-18,44;CL:0002609,4.23e-08,6;CL:0002321,1.37e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.33e-33!71;UBERON:0003075!1.33e-33!71;UBERON:0007284!1.33e-33!71;UBERON:0004121!4.14e-32!102;UBERON:0000924!4.14e-32!102;UBERON:0006601!4.14e-32!102;UBERON:0000073!2.57e-31!75;UBERON:0001016!2.57e-31!75;UBERON:0001017!2.64e-31!73;UBERON:0005743!2.64e-31!73;UBERON:0000033!5.11e-25!63;UBERON:0001049!1.66e-24!52;UBERON:0005068!1.66e-24!52;UBERON:0006241!1.66e-24!52;UBERON:0007135!1.66e-24!52;UBERON:0000955!2.25e-23!50;UBERON:0006238!2.25e-23!50;UBERON:0003056!9.78e-23!49;UBERON:0002616!1.29e-22!49;UBERON:0003080!9.41e-19!40;UBERON:0002780!4.54e-18!39;UBERON:0001890!4.54e-18!39;UBERON:0006240!4.54e-18!39;UBERON:0002020!1.21e-15!34;UBERON:0002791!9.66e-13!29;UBERON:0003528!9.66e-13!29;UBERON:0001893!9.66e-13!29;UBERON:0007811!1.44e-12!86;UBERON:0000153!5.22e-10!94;UBERON:0000956!3.51e-08!21;UBERON:0001869!3.51e-08!21;UBERON:0000203!3.51e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.91e-42,73;UBERON:0001016,4.69e-40,75;UBERON:0002346,3.03e-39,64;UBERON:0003075,3.03e-39,64;UBERON:0007284,3.03e-39,64;UBERON:0004121,6.42e-39,95;UBERON:0000924,6.42e-39,95;UBERON:0006601,6.42e-39,95;UBERON:0000073,1.18e-32,54;UBERON:0010371,5.11e-32,73;UBERON:0001049,7.97e-31,52;UBERON:0005068,7.97e-31,52;UBERON:0006241,7.97e-31,52;UBERON:0007135,7.97e-31,52;UBERON:0003056,4.05e-29,49;UBERON:0010314,1.99e-27,92;UBERON:0000955,1.55e-26,47;UBERON:0006238,1.55e-26,47;UBERON:0002616,1.61e-25,46;UBERON:0003080,3.08e-23,40;UBERON:0002780,2.67e-22,39;UBERON:0001890,2.67e-22,39;UBERON:0006240,2.67e-22,39;UBERON:0002020,6.10e-19,34;UBERON:0003528,5.66e-15,29;UBERON:0002791,5.66e-15,29;UBERON:0001893,5.66e-15,29;UBERON:0000956,7.59e-09,21;UBERON:0001869,7.59e-09,21;UBERON:0000203,7.59e-09,21;UBERON:0001894,2.16e-08,10;UBERON:0006222,2.16e-08,10;UBERON:0002420,6.45e-08,8;UBERON:0007245,6.45e-08,8;UBERON:0010009,6.45e-08,8;UBERON:0010011,6.45e-08,8;UBERON:0000454,6.45e-08,8;UBERON:0003076,6.52e-08,12;UBERON:0003057,6.52e-08,12;UBERON:0000007,7.59e-07,8;UBERON:0003296,7.59e-07,8;UBERON:0010133,7.59e-07,8|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.9559956734746,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,11.5320382689971,8.46385566835253,9.50747105259269,0,0,0,0,0,0,1.15265491596466,11.6132365785495,13.6355997715008,9.25429829946081,1.99955689082663,3.97563373712904,11.5141351262057,12.7474476454254,11.9498442259303,3.30347642998166,6.12899222808901,5.68344173048101,11.7378796079873,13.631658896759,11.4600941522487,4.18774498502071,1.12552522006336,4.88954392885792,5.00868595305235,5.69486723196412,8.94717339961443,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,4.3371331691534,4.26251669636998,3.45923245884088,1.80867168663147,3.05730638552832,0.628332956648377,0,0,0,0,0,0,0,31.6203260772471,26.8091784721222,0,0,0,0,5.99162557619291,2.74500361691176,6.03140890141749,3.12883776346098,2.04572365864264,4.98691306942944,4.70499662896497,0,0,0,5.05060454127538,0,1.37941262660084,3.78130472591233,2.56198190320716,5.44291993210623,7.17436833595159,7.02762934197966,7.76110112217047,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51898840548794,5.04232600658494,0,0.264450566663544,0.853153002140936,0.696710015581316,0.77320476793256,0.80673409849337,0.444756087689741,0.190225626112559,0,0.658795818896044,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.799739588268102,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,5.27452589664914,0,0,1.89304931649754,1.95219372148319,3.66219776145758,1.19484398976276,2.45078541490634,1.69845918473299,3.23848561339915,4.09158201075837,5.13874111330481,7.39039027770156,0,0,0,0,0,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,8.5109901438447,1.26042765821917,1.03486947026204,2.14337035031592,5.32020700926821,7.84822797449111,6.74650984468696,3.04464949114599,0,0,0.220528398054962,0,0,0,0,0,0.874442509889552,5.56275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.108005340821801,0.627264888043406,0.87345025498471,0.269728692769641,0.330613822901344,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.89038500578056,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,3.17199686288943,1.55328093525546,1.3492355185943,2.79317411380722,2.90247129782028,1.94485373654635,1.67690530102386,1.2869045591501,1.55572709461131,0.618105171716683,2.24643446714271,0.505394423527595,0.50695859978048,0.754505365544305,1.12369808963859,0.960377286073039,1.20614484806788,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.883193520806384,2.40008476669791,1.59728225543404,1.43061713968393,2.47088908274958,0.941093804153306,1.60767754994185,1.09756783723664,1.8414879800649,0.679020569229309,2.80571135828869,0.711810108745045,1.0835493061312,2.86461730218783,1.54936841185966,0.578719832943424,2.49810577937946,0.935726433781634,0.859484216193193,0.57386499620653,0.220591419119515,0|short_description=p1@Myt1}} | ||
|EntrezGene=17932 | |||
|HGNC= | |||
|MCL_coexpression_id=367 | |||
|UniProt=Q8CFC2 | |||
|association_with_transcript=0bp_to_ENSMUST00000108756_5end | |||
|description=CAGE_peak_1_at_Myt1_5end | |||
|id=chr2:181501745..181501778,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.61e-19!33;CL:0000047!2.61e-19!33;CL:0000031!2.61e-19!33;CL:0000404!2.61e-19!33;CL:0000117!1.29e-16!23;CL:0000337!1.29e-16!23;CL:0000221!3.88e-14!44;CL:0000133!3.88e-14!44;CL:0002319!4.43e-14!43;CL:0000393!6.79e-14!39;CL:0000211!6.79e-14!39;CL:0000055!5.92e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.27e-27,33;CL:0000047,7.27e-27,33;CL:0000031,7.27e-27,33;CL:0000404,7.27e-27,33;CL:0000117,1.06e-22,23;CL:0000337,1.06e-22,23;CL:0000393,6.43e-21,39;CL:0000211,6.43e-21,39;CL:0002319,5.46e-19,43;CL:0000221,2.71e-18,44;CL:0000133,2.71e-18,44;CL:0002609,4.23e-08,6;CL:0002321,1.37e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.33e-33!71;UBERON:0003075!1.33e-33!71;UBERON:0007284!1.33e-33!71;UBERON:0004121!4.14e-32!102;UBERON:0000924!4.14e-32!102;UBERON:0006601!4.14e-32!102;UBERON:0000073!2.57e-31!75;UBERON:0001016!2.57e-31!75;UBERON:0001017!2.64e-31!73;UBERON:0005743!2.64e-31!73;UBERON:0000033!5.11e-25!63;UBERON:0001049!1.66e-24!52;UBERON:0005068!1.66e-24!52;UBERON:0006241!1.66e-24!52;UBERON:0007135!1.66e-24!52;UBERON:0000955!2.25e-23!50;UBERON:0006238!2.25e-23!50;UBERON:0003056!9.78e-23!49;UBERON:0002616!1.29e-22!49;UBERON:0003080!9.41e-19!40;UBERON:0002780!4.54e-18!39;UBERON:0001890!4.54e-18!39;UBERON:0006240!4.54e-18!39;UBERON:0002020!1.21e-15!34;UBERON:0002791!9.66e-13!29;UBERON:0003528!9.66e-13!29;UBERON:0001893!9.66e-13!29;UBERON:0007811!1.44e-12!86;UBERON:0000153!5.22e-10!94;UBERON:0000956!3.51e-08!21;UBERON:0001869!3.51e-08!21;UBERON:0000203!3.51e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.91e-42,73;UBERON:0001016,4.69e-40,75;UBERON:0002346,3.03e-39,64;UBERON:0003075,3.03e-39,64;UBERON:0007284,3.03e-39,64;UBERON:0004121,6.42e-39,95;UBERON:0000924,6.42e-39,95;UBERON:0006601,6.42e-39,95;UBERON:0000073,1.18e-32,54;UBERON:0010371,5.11e-32,73;UBERON:0001049,7.97e-31,52;UBERON:0005068,7.97e-31,52;UBERON:0006241,7.97e-31,52;UBERON:0007135,7.97e-31,52;UBERON:0003056,4.05e-29,49;UBERON:0010314,1.99e-27,92;UBERON:0000955,1.55e-26,47;UBERON:0006238,1.55e-26,47;UBERON:0002616,1.61e-25,46;UBERON:0003080,3.08e-23,40;UBERON:0002780,2.67e-22,39;UBERON:0001890,2.67e-22,39;UBERON:0006240,2.67e-22,39;UBERON:0002020,6.10e-19,34;UBERON:0003528,5.66e-15,29;UBERON:0002791,5.66e-15,29;UBERON:0001893,5.66e-15,29;UBERON:0000956,7.59e-09,21;UBERON:0001869,7.59e-09,21;UBERON:0000203,7.59e-09,21;UBERON:0001894,2.16e-08,10;UBERON:0006222,2.16e-08,10;UBERON:0002420,6.45e-08,8;UBERON:0007245,6.45e-08,8;UBERON:0010009,6.45e-08,8;UBERON:0010011,6.45e-08,8;UBERON:0000454,6.45e-08,8;UBERON:0003076,6.52e-08,12;UBERON:0003057,6.52e-08,12;UBERON:0000007,7.59e-07,8;UBERON:0003296,7.59e-07,8;UBERON:0010133,7.59e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.9559956734746,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,11.5320382689971,8.46385566835253,9.50747105259269,0,0,0,0,0,0,1.15265491596466,11.6132365785495,13.6355997715008,9.25429829946081,1.99955689082663,3.97563373712904,11.5141351262057,12.7474476454254,11.9498442259303,3.30347642998166,6.12899222808901,5.68344173048101,11.7378796079873,13.631658896759,11.4600941522487,4.18774498502071,1.12552522006336,4.88954392885792,5.00868595305235,5.69486723196412,8.94717339961443,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,4.3371331691534,4.26251669636998,3.45923245884088,1.80867168663147,3.05730638552832,0.628332956648377,0,0,0,0,0,0,0,31.6203260772471,26.8091784721222,0,0,0,0,5.99162557619291,2.74500361691176,6.03140890141749,3.12883776346098,2.04572365864264,4.98691306942944,4.70499662896497,0,0,0,5.05060454127538,0,1.37941262660084,3.78130472591233,2.56198190320716,5.44291993210623,7.17436833595159,7.02762934197966,7.76110112217047,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51898840548794,5.04232600658494,0,0.264450566663544,0.853153002140936,0.696710015581316,0.77320476793256,0.80673409849337,0.444756087689741,0.190225626112559,0,0.658795818896044,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0.189667900953082,0.799739588268102,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,5.27452589664914,0,0,1.89304931649754,1.95219372148319,3.66219776145758,1.19484398976276,2.45078541490634,1.69845918473299,3.23848561339915,4.09158201075837,5.13874111330481,7.39039027770156,0,0,0,0,0,0.485561272309963,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,8.5109901438447,1.26042765821917,1.03486947026204,2.14337035031592,5.32020700926821,7.84822797449111,6.74650984468696,3.04464949114599,0,0,0.220528398054962,0,0,0,0,0,0.874442509889552,5.56275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.108005340821801,0.627264888043406,0.87345025498471,0.269728692769641,0.330613822901344,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.89038500578056,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,3.17199686288943,1.55328093525546,1.3492355185943,2.79317411380722,2.90247129782028,1.94485373654635,1.67690530102386,1.2869045591501,1.55572709461131,0.618105171716683,2.24643446714271,0.505394423527595,0.50695859978048,0.754505365544305,1.12369808963859,0.960377286073039,1.20614484806788,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.883193520806384,2.40008476669791,1.59728225543404,1.43061713968393,2.47088908274958,0.941093804153306,1.60767754994185,1.09756783723664,1.8414879800649,0.679020569229309,2.80571135828869,0.711810108745045,1.0835493061312,2.86461730218783,1.54936841185966,0.578719832943424,2.49810577937946,0.935726433781634,0.859484216193193,0.57386499620653,0.220591419119515,0 | |||
|short_description=p1@Myt1 | |||
}} |
Revision as of 23:17, 13 September 2013
Short description: | p1@Myt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Myt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:367 |
Association with transcript: | 0bp_to_ENSMUST00000108756_5end |
EntrezGene: | Myt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.27e-27 | 33 |
neuronal stem cell | 7.27e-27 | 33 |
neuroblast | 7.27e-27 | 33 |
electrically signaling cell | 7.27e-27 | 33 |
CNS neuron (sensu Vertebrata) | 1.06e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-22 | 23 |
electrically responsive cell | 6.43e-21 | 39 |
electrically active cell | 6.43e-21 | 39 |
neural cell | 5.46e-19 | 43 |
ectodermal cell | 2.71e-18 | 44 |
neurectodermal cell | 2.71e-18 | 44 |
neuron of cerebral cortex | 4.23e-08 | 6 |
embryonic cell | 1.37e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.