FFCP PHASE1:Mm9::chr3:13471637..13471733,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76897|HGNC=|MCL_coexpression_id=1|UniProt=Q8BTF8|association_with_transcript=0bp_to_NM_001163328,NM_178631,uc008oqb.2,uc008oqc.2,uc008oqd.2_5end|description=CAGE_peak_1_at_Ralyl_5end|id=chr3:13471637..13471733,+|ontology_enrichment_celltype=CL:0000540!6.62e-19!33;CL:0000047!6.62e-19!33;CL:0000031!6.62e-19!33;CL:0000404!6.62e-19!33;CL:0000117!1.38e-14!23;CL:0000337!1.38e-14!23;CL:0000393!2.18e-13!39;CL:0000211!2.18e-13!39;CL:0000221!3.13e-12!44;CL:0000133!3.13e-12!44;CL:0002319!3.92e-12!43;CL:0000055!2.62e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.84e-24,33;CL:0000047,5.84e-24,33;CL:0000031,5.84e-24,33;CL:0000404,5.84e-24,33;CL:0000117,2.23e-18,23;CL:0000337,2.23e-18,23;CL:0000393,2.79e-18,39;CL:0000211,2.79e-18,39;CL:0002319,2.85e-16,43;CL:0000221,1.29e-15,44;CL:0000133,1.29e-15,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.58e-30!75;UBERON:0001016!2.58e-30!75;UBERON:0001017!4.10e-30!73;UBERON:0005743!4.10e-30!73;UBERON:0002346!6.02e-28!71;UBERON:0003075!6.02e-28!71;UBERON:0007284!6.02e-28!71;UBERON:0004121!2.50e-27!102;UBERON:0000924!2.50e-27!102;UBERON:0006601!2.50e-27!102;UBERON:0001049!1.82e-23!52;UBERON:0005068!1.82e-23!52;UBERON:0006241!1.82e-23!52;UBERON:0007135!1.82e-23!52;UBERON:0000033!2.07e-23!63;UBERON:0000955!3.16e-22!50;UBERON:0006238!3.16e-22!50;UBERON:0002616!1.20e-21!49;UBERON:0003056!6.00e-21!49;UBERON:0002020!3.37e-19!34;UBERON:0003080!1.47e-18!40;UBERON:0002780!7.03e-18!39;UBERON:0001890!7.03e-18!39;UBERON:0006240!7.03e-18!39;UBERON:0002791!6.07e-16!29;UBERON:0003528!6.07e-16!29;UBERON:0001893!6.07e-16!29;UBERON:0007811!1.42e-12!86;UBERON:0000153!8.15e-12!94;UBERON:0000956!3.00e-11!21;UBERON:0001869!3.00e-11!21;UBERON:0000203!3.00e-11!21;UBERON:0002021!3.45e-09!10;UBERON:0000411!3.45e-09!10;UBERON:0001950!3.45e-09!10;UBERON:0002619!3.63e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-38,73;UBERON:0001016,1.17e-37,75;UBERON:0002346,3.06e-33,64;UBERON:0003075,3.06e-33,64;UBERON:0007284,3.06e-33,64;UBERON:0004121,5.75e-33,95;UBERON:0000924,5.75e-33,95;UBERON:0006601,5.75e-33,95;UBERON:0000073,1.37e-30,54;UBERON:0001049,1.54e-28,52;UBERON:0005068,1.54e-28,52;UBERON:0006241,1.54e-28,52;UBERON:0007135,1.54e-28,52;UBERON:0010371,1.77e-27,73;UBERON:0002020,5.88e-25,34;UBERON:0000955,3.95e-24,47;UBERON:0006238,3.95e-24,47;UBERON:0003056,6.83e-24,49;UBERON:0002616,2.10e-23,46;UBERON:0003080,1.14e-21,40;UBERON:0002780,8.23e-21,39;UBERON:0001890,8.23e-21,39;UBERON:0006240,8.23e-21,39;UBERON:0003528,9.90e-21,29;UBERON:0002791,9.90e-21,29;UBERON:0001893,9.90e-21,29;UBERON:0010314,2.89e-18,92;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0002619,6.03e-12,17;UBERON:0002021,2.08e-11,10;UBERON:0000411,2.08e-11,10;UBERON:0001950,2.08e-11,10;UBERON:0003076,2.68e-07,12;UBERON:0003057,2.68e-07,12;UBERON:0002420,2.86e-07,8;UBERON:0007245,2.86e-07,8;UBERON:0010009,2.86e-07,8;UBERON:0010011,2.86e-07,8;UBERON:0000454,2.86e-07,8|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.18467533631554,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3243045203437,34.3844136526821,45.0020296489387,0,0,0,0,0,0,0,10.3689612308478,8.50537411489651,9.88527318351495,28.2794474559766,26.7250934551452,7.22695715368229,4.60058260887535,17.4651569455904,64.9683697896393,49.2873125008825,44.3922881110544,26.3772575460388,20.4932321669398,26.045668527838,33.7811428791671,34.3285192119325,41.1027286519619,40.3641162098925,39.7216989429497,32.8063024652529,0.530083353332288,1.20914496170857,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0.704217098883403,1.28326477414318,0,0,0,0,0,1.37020655662872,0.258937883647172,2.3750742250372,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0,0,0,0,71.4385144708175,86.7109366207704,0,0,0,0,38.9455662452539,19.6725259212009,11.4345460422707,64.14117415095,51.1430914660661,34.2850273523274,28.0677385107221,0.305518091550949,0,0.252722758433675,1.26265113531884,1.69156575851515,0.689706313300419,2.16074555766419,2.56198190320716,3.81004395247436,6.53379973452734,7.21503279109912,7.76110112217047,0,0.756424320671277,0.175951124163949,1.09597866213787,0.556094498451196,0,0,0,0,0,0,0,0.703578179943289,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,47.3152384269286,23.4622516224768,0,0,0.213288250535234,0.696710015581316,0.77320476793256,1.61346819698674,1.33426826306922,0.951128130562796,0,0.658795818896044,1.25667604400135,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,28.4174544278392,22.7390671988874,0,0,11.9893123378178,9.37052986311932,15.7259080344943,3.82350076724083,5.34716817797746,11.889214293131,9.71545684019746,19.2888866221466,21.7408277870588,18.6366363524648,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,0.900305470156551,0.129358683782755,0.428674070063185,2.83744373827638,2.49716344642899,5.10101963866575,1.522324745573,0,0,0.661585194164886,0,0.161464426695906,0,0,0,0,31.3368760397761,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,1.08005340821801,0.836353184057875,0.655087691238533,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6193021891989,95.2873239569856,97.3922372846974,181.992520101965,119.204358440092,129.927750351028,88.4279475303666,90.9648830512925,99.2381875675408,94.2323767388312,0.93408612825759,3.59122386060928,2.73173769206615,4.132814190161,4.40187641518763,6.43452279575049,4.00044110042907,2.88449080134452,4.49286893428541,4.29585259998456,4.81610669791456,3.01802146217722,4.68207537349412,4.48176066834085,5.05432126809397,8.57328644309533,5.2147946675185,5.78727661391115,5.35711671044299,3.23837624295674,4.4573002810104,5.6792257970988,5.24559617884106,3.34296758254356,4.14081273827455,4.48457421825885,4.75612729469209,6.05060336307039,5.02475221229689,5.05028044491965,5.21994079746366,4.53120618927592,4.50154147486658,6.04253680625267,3.85813221962283,7.99393849401427,4.91256377735358,4.08255002691767,0.382576664137687,0.661774257358546,2.08681052058379|short_description=p1@Ralyl}} | ||
|EntrezGene=76897 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8BTF8 | |||
|association_with_transcript=0bp_to_NM_001163328,NM_178631,uc008oqb.2,uc008oqc.2,uc008oqd.2_5end | |||
|description=CAGE_peak_1_at_Ralyl_5end | |||
|id=chr3:13471637..13471733,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.62e-19!33;CL:0000047!6.62e-19!33;CL:0000031!6.62e-19!33;CL:0000404!6.62e-19!33;CL:0000117!1.38e-14!23;CL:0000337!1.38e-14!23;CL:0000393!2.18e-13!39;CL:0000211!2.18e-13!39;CL:0000221!3.13e-12!44;CL:0000133!3.13e-12!44;CL:0002319!3.92e-12!43;CL:0000055!2.62e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.84e-24,33;CL:0000047,5.84e-24,33;CL:0000031,5.84e-24,33;CL:0000404,5.84e-24,33;CL:0000117,2.23e-18,23;CL:0000337,2.23e-18,23;CL:0000393,2.79e-18,39;CL:0000211,2.79e-18,39;CL:0002319,2.85e-16,43;CL:0000221,1.29e-15,44;CL:0000133,1.29e-15,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.58e-30!75;UBERON:0001016!2.58e-30!75;UBERON:0001017!4.10e-30!73;UBERON:0005743!4.10e-30!73;UBERON:0002346!6.02e-28!71;UBERON:0003075!6.02e-28!71;UBERON:0007284!6.02e-28!71;UBERON:0004121!2.50e-27!102;UBERON:0000924!2.50e-27!102;UBERON:0006601!2.50e-27!102;UBERON:0001049!1.82e-23!52;UBERON:0005068!1.82e-23!52;UBERON:0006241!1.82e-23!52;UBERON:0007135!1.82e-23!52;UBERON:0000033!2.07e-23!63;UBERON:0000955!3.16e-22!50;UBERON:0006238!3.16e-22!50;UBERON:0002616!1.20e-21!49;UBERON:0003056!6.00e-21!49;UBERON:0002020!3.37e-19!34;UBERON:0003080!1.47e-18!40;UBERON:0002780!7.03e-18!39;UBERON:0001890!7.03e-18!39;UBERON:0006240!7.03e-18!39;UBERON:0002791!6.07e-16!29;UBERON:0003528!6.07e-16!29;UBERON:0001893!6.07e-16!29;UBERON:0007811!1.42e-12!86;UBERON:0000153!8.15e-12!94;UBERON:0000956!3.00e-11!21;UBERON:0001869!3.00e-11!21;UBERON:0000203!3.00e-11!21;UBERON:0002021!3.45e-09!10;UBERON:0000411!3.45e-09!10;UBERON:0001950!3.45e-09!10;UBERON:0002619!3.63e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-38,73;UBERON:0001016,1.17e-37,75;UBERON:0002346,3.06e-33,64;UBERON:0003075,3.06e-33,64;UBERON:0007284,3.06e-33,64;UBERON:0004121,5.75e-33,95;UBERON:0000924,5.75e-33,95;UBERON:0006601,5.75e-33,95;UBERON:0000073,1.37e-30,54;UBERON:0001049,1.54e-28,52;UBERON:0005068,1.54e-28,52;UBERON:0006241,1.54e-28,52;UBERON:0007135,1.54e-28,52;UBERON:0010371,1.77e-27,73;UBERON:0002020,5.88e-25,34;UBERON:0000955,3.95e-24,47;UBERON:0006238,3.95e-24,47;UBERON:0003056,6.83e-24,49;UBERON:0002616,2.10e-23,46;UBERON:0003080,1.14e-21,40;UBERON:0002780,8.23e-21,39;UBERON:0001890,8.23e-21,39;UBERON:0006240,8.23e-21,39;UBERON:0003528,9.90e-21,29;UBERON:0002791,9.90e-21,29;UBERON:0001893,9.90e-21,29;UBERON:0010314,2.89e-18,92;UBERON:0000956,1.22e-14,21;UBERON:0001869,1.22e-14,21;UBERON:0000203,1.22e-14,21;UBERON:0002619,6.03e-12,17;UBERON:0002021,2.08e-11,10;UBERON:0000411,2.08e-11,10;UBERON:0001950,2.08e-11,10;UBERON:0003076,2.68e-07,12;UBERON:0003057,2.68e-07,12;UBERON:0002420,2.86e-07,8;UBERON:0007245,2.86e-07,8;UBERON:0010009,2.86e-07,8;UBERON:0010011,2.86e-07,8;UBERON:0000454,2.86e-07,8 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.18467533631554,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.3243045203437,34.3844136526821,45.0020296489387,0,0,0,0,0,0,0,10.3689612308478,8.50537411489651,9.88527318351495,28.2794474559766,26.7250934551452,7.22695715368229,4.60058260887535,17.4651569455904,64.9683697896393,49.2873125008825,44.3922881110544,26.3772575460388,20.4932321669398,26.045668527838,33.7811428791671,34.3285192119325,41.1027286519619,40.3641162098925,39.7216989429497,32.8063024652529,0.530083353332288,1.20914496170857,0,0,0,0.539703191637817,0,0,1.26399978118577,0,0,0,0.704217098883403,1.28326477414318,0,0,0,0,0,1.37020655662872,0.258937883647172,2.3750742250372,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0,0,0,0,71.4385144708175,86.7109366207704,0,0,0,0,38.9455662452539,19.6725259212009,11.4345460422707,64.14117415095,51.1430914660661,34.2850273523274,28.0677385107221,0.305518091550949,0,0.252722758433675,1.26265113531884,1.69156575851515,0.689706313300419,2.16074555766419,2.56198190320716,3.81004395247436,6.53379973452734,7.21503279109912,7.76110112217047,0,0.756424320671277,0.175951124163949,1.09597866213787,0.556094498451196,0,0,0,0,0,0,0,0.703578179943289,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0,0,0,47.3152384269286,23.4622516224768,0,0,0.213288250535234,0.696710015581316,0.77320476793256,1.61346819698674,1.33426826306922,0.951128130562796,0,0.658795818896044,1.25667604400135,0.795825888164603,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,28.4174544278392,22.7390671988874,0,0,11.9893123378178,9.37052986311932,15.7259080344943,3.82350076724083,5.34716817797746,11.889214293131,9.71545684019746,19.2888866221466,21.7408277870588,18.6366363524648,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,3.74483566329167,0.900305470156551,0.129358683782755,0.428674070063185,2.83744373827638,2.49716344642899,5.10101963866575,1.522324745573,0,0,0.661585194164886,0,0.161464426695906,0,0,0,0,31.3368760397761,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,1.08005340821801,0.836353184057875,0.655087691238533,0.674321731924103,0.661227645802687,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,92.6193021891989,95.2873239569856,97.3922372846974,181.992520101965,119.204358440092,129.927750351028,88.4279475303666,90.9648830512925,99.2381875675408,94.2323767388312,0.93408612825759,3.59122386060928,2.73173769206615,4.132814190161,4.40187641518763,6.43452279575049,4.00044110042907,2.88449080134452,4.49286893428541,4.29585259998456,4.81610669791456,3.01802146217722,4.68207537349412,4.48176066834085,5.05432126809397,8.57328644309533,5.2147946675185,5.78727661391115,5.35711671044299,3.23837624295674,4.4573002810104,5.6792257970988,5.24559617884106,3.34296758254356,4.14081273827455,4.48457421825885,4.75612729469209,6.05060336307039,5.02475221229689,5.05028044491965,5.21994079746366,4.53120618927592,4.50154147486658,6.04253680625267,3.85813221962283,7.99393849401427,4.91256377735358,4.08255002691767,0.382576664137687,0.661774257358546,2.08681052058379 | |||
|short_description=p1@Ralyl | |||
}} |
Revision as of 01:36, 14 September 2013
Short description: | p1@Ralyl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ralyl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_001163328, NM_178631, uc008oqb.2, uc008oqc.2, uc008oqd.2_5end |
EntrezGene: | Ralyl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.84e-24 | 33 |
neuronal stem cell | 5.84e-24 | 33 |
neuroblast | 5.84e-24 | 33 |
electrically signaling cell | 5.84e-24 | 33 |
CNS neuron (sensu Vertebrata) | 2.23e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.23e-18 | 23 |
electrically responsive cell | 2.79e-18 | 39 |
electrically active cell | 2.79e-18 | 39 |
neural cell | 2.85e-16 | 43 |
ectodermal cell | 1.29e-15 | 44 |
neurectodermal cell | 1.29e-15 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.