FFCP PHASE1:Mm9::chr3:58380474..58380504,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=0|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:58380474..58380504,-|id=chr3:58380474..58380504,-|ontology_enrichment_celltype=CL:0000540!1.42e-09!33;CL:0000047!1.42e-09!33;CL:0000031!1.42e-09!33;CL:0000404!1.42e-09!33;CL:0000393!1.15e-08!39;CL:0000211!1.15e-08!39;CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23;CL:0000221!3.88e-07!44;CL:0000133!3.88e-07!44;CL:0002319!4.31e-07!43|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-22!71;UBERON:0003075!1.73e-22!71;UBERON:0007284!1.73e-22!71;UBERON:0001017!4.08e-22!73;UBERON:0005743!4.08e-22!73;UBERON:0000033!4.86e-21!63;UBERON:0000073!1.33e-20!75;UBERON:0001016!1.33e-20!75;UBERON:0001049!8.41e-20!52;UBERON:0005068!8.41e-20!52;UBERON:0006241!8.41e-20!52;UBERON:0007135!8.41e-20!52;UBERON:0000955!1.33e-19!50;UBERON:0006238!1.33e-19!50;UBERON:0002616!4.18e-19!49;UBERON:0004121!1.06e-18!102;UBERON:0000924!1.06e-18!102;UBERON:0006601!1.06e-18!102;UBERON:0003056!3.12e-17!49;UBERON:0003080!5.11e-15!40;UBERON:0002780!7.57e-15!39;UBERON:0001890!7.57e-15!39;UBERON:0006240!7.57e-15!39;UBERON:0007811!4.06e-13!86;UBERON:0000153!4.51e-13!94;UBERON:0002020!4.20e-10!34;UBERON:0002791!6.75e-09!29;UBERON:0003528!6.75e-09!29;UBERON:0001893!6.75e-09!29;UBERON:0001894!1.24e-07!10;UBERON:0006222!1.24e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.73e-27,64;UBERON:0003075,4.73e-27,64;UBERON:0007284,4.73e-27,64;UBERON:0010371,1.18e-22,73;UBERON:0000073,1.74e-22,54;UBERON:0001049,4.65e-22,52;UBERON:0005068,4.65e-22,52;UBERON:0006241,4.65e-22,52;UBERON:0007135,4.65e-22,52;UBERON:0001017,1.15e-20,73;UBERON:0002616,3.90e-20,46;UBERON:0001016,6.83e-20,75;UBERON:0000955,1.44e-19,47;UBERON:0006238,1.44e-19,47;UBERON:0002780,1.16e-18,39;UBERON:0001890,1.16e-18,39;UBERON:0006240,1.16e-18,39;UBERON:0003056,1.46e-18,49;UBERON:0001894,3.72e-18,10;UBERON:0006222,3.72e-18,10;UBERON:0003080,4.74e-18,40;UBERON:0004121,1.05e-17,95;UBERON:0000924,1.05e-17,95;UBERON:0006601,1.05e-17,95;UBERON:0010314,3.27e-16,92;UBERON:0000007,5.14e-15,8;UBERON:0003296,5.14e-15,8;UBERON:0010133,5.14e-15,8;UBERON:0002420,5.14e-08,8;UBERON:0007245,5.14e-08,8;UBERON:0010009,5.14e-08,8;UBERON:0010011,5.14e-08,8;UBERON:0000454,5.14e-08,8;UBERON:0000025,1.06e-07,114;UBERON:0002020,1.32e-07,34;UBERON:0010313,7.02e-07,3;UBERON:0002342,7.02e-07,3;UBERON:0002005,7.02e-07,3;UBERON:0005428,7.02e-07,3;UBERON:0005062,7.02e-07,3;UBERON:0003528,7.67e-07,29;UBERON:0002791,7.67e-07,29;UBERON:0001893,7.67e-07,29;UBERON:0004111,9.74e-07,122|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.387369970324729,0,0.468129052643987,0.171217968225505,0.159544317990673,0.171200729931206,0.174840804837995,0,0,0,0.315462165358238,0.137114433605739,0,2.55129870453209,0.893618560807968,1.04479915655574,0.319984845586813,0,0,0,0,0,0,0,3.17515336729816,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,1.00717454380462,0.506884656097573,0.917733760808408,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.630974884054146,1.14260393761521,0.220868540951614,0.61245399607477,0.479227355091182,0.919218786610021,1.10115880999389,1.0214987046815,0.46081959976873,1.18697658957174,2.01272815925301,0,1.67509799400829,2.25105044012672,1.06958773443767,0.294628585473668,0.711858403995515,1.4911955666024,0,0,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.608930956624282,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0,0,0,1.17112318804619,1.67557365450764,0,0.11981512450592,0.599902730993408,0.254140454146129,0.449371918214468,1.83000241127451,0.879580464790051,0.869121600961382,1.27857728665165,1.87009240103604,1.29793010454206,0.101839363850316,0.497627882440372,1.76905930903572,0.210441855886474,0.520481771850815,0.229902104433473,1.62055916824814,0.150704817835715,0.884474488967262,1.66547836370305,0.749613796477831,1.81092359517311,0.215567992932842,0.567318240503458,0.703804496655795,0,0.278047249225598,0,0.411564272815887,0,0.702213187313235,0,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.630869845692382,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0.193952487167626,0.420814919341911,0.252946148497029,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:58380474..58380504,- | |||
|id=chr3:58380474..58380504,- | |||
|ontology_enrichment_celltype=CL:0000540!1.42e-09!33;CL:0000047!1.42e-09!33;CL:0000031!1.42e-09!33;CL:0000404!1.42e-09!33;CL:0000393!1.15e-08!39;CL:0000211!1.15e-08!39;CL:0000117!1.88e-07!23;CL:0000337!1.88e-07!23;CL:0000221!3.88e-07!44;CL:0000133!3.88e-07!44;CL:0002319!4.31e-07!43 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.73e-22!71;UBERON:0003075!1.73e-22!71;UBERON:0007284!1.73e-22!71;UBERON:0001017!4.08e-22!73;UBERON:0005743!4.08e-22!73;UBERON:0000033!4.86e-21!63;UBERON:0000073!1.33e-20!75;UBERON:0001016!1.33e-20!75;UBERON:0001049!8.41e-20!52;UBERON:0005068!8.41e-20!52;UBERON:0006241!8.41e-20!52;UBERON:0007135!8.41e-20!52;UBERON:0000955!1.33e-19!50;UBERON:0006238!1.33e-19!50;UBERON:0002616!4.18e-19!49;UBERON:0004121!1.06e-18!102;UBERON:0000924!1.06e-18!102;UBERON:0006601!1.06e-18!102;UBERON:0003056!3.12e-17!49;UBERON:0003080!5.11e-15!40;UBERON:0002780!7.57e-15!39;UBERON:0001890!7.57e-15!39;UBERON:0006240!7.57e-15!39;UBERON:0007811!4.06e-13!86;UBERON:0000153!4.51e-13!94;UBERON:0002020!4.20e-10!34;UBERON:0002791!6.75e-09!29;UBERON:0003528!6.75e-09!29;UBERON:0001893!6.75e-09!29;UBERON:0001894!1.24e-07!10;UBERON:0006222!1.24e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.73e-27,64;UBERON:0003075,4.73e-27,64;UBERON:0007284,4.73e-27,64;UBERON:0010371,1.18e-22,73;UBERON:0000073,1.74e-22,54;UBERON:0001049,4.65e-22,52;UBERON:0005068,4.65e-22,52;UBERON:0006241,4.65e-22,52;UBERON:0007135,4.65e-22,52;UBERON:0001017,1.15e-20,73;UBERON:0002616,3.90e-20,46;UBERON:0001016,6.83e-20,75;UBERON:0000955,1.44e-19,47;UBERON:0006238,1.44e-19,47;UBERON:0002780,1.16e-18,39;UBERON:0001890,1.16e-18,39;UBERON:0006240,1.16e-18,39;UBERON:0003056,1.46e-18,49;UBERON:0001894,3.72e-18,10;UBERON:0006222,3.72e-18,10;UBERON:0003080,4.74e-18,40;UBERON:0004121,1.05e-17,95;UBERON:0000924,1.05e-17,95;UBERON:0006601,1.05e-17,95;UBERON:0010314,3.27e-16,92;UBERON:0000007,5.14e-15,8;UBERON:0003296,5.14e-15,8;UBERON:0010133,5.14e-15,8;UBERON:0002420,5.14e-08,8;UBERON:0007245,5.14e-08,8;UBERON:0010009,5.14e-08,8;UBERON:0010011,5.14e-08,8;UBERON:0000454,5.14e-08,8;UBERON:0000025,1.06e-07,114;UBERON:0002020,1.32e-07,34;UBERON:0010313,7.02e-07,3;UBERON:0002342,7.02e-07,3;UBERON:0002005,7.02e-07,3;UBERON:0005428,7.02e-07,3;UBERON:0005062,7.02e-07,3;UBERON:0003528,7.67e-07,29;UBERON:0002791,7.67e-07,29;UBERON:0001893,7.67e-07,29;UBERON:0004111,9.74e-07,122 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.387369970324729,0,0.468129052643987,0.171217968225505,0.159544317990673,0.171200729931206,0.174840804837995,0,0,0,0.315462165358238,0.137114433605739,0,2.55129870453209,0.893618560807968,1.04479915655574,0.319984845586813,0,0,0,0,0,0,0,3.17515336729816,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,1.00717454380462,0.506884656097573,0.917733760808408,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.630974884054146,1.14260393761521,0.220868540951614,0.61245399607477,0.479227355091182,0.919218786610021,1.10115880999389,1.0214987046815,0.46081959976873,1.18697658957174,2.01272815925301,0,1.67509799400829,2.25105044012672,1.06958773443767,0.294628585473668,0.711858403995515,1.4911955666024,0,0,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.608930956624282,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0.144599356919912,0.884610551949874,0,0,0,0,1.17112318804619,1.67557365450764,0,0.11981512450592,0.599902730993408,0.254140454146129,0.449371918214468,1.83000241127451,0.879580464790051,0.869121600961382,1.27857728665165,1.87009240103604,1.29793010454206,0.101839363850316,0.497627882440372,1.76905930903572,0.210441855886474,0.520481771850815,0.229902104433473,1.62055916824814,0.150704817835715,0.884474488967262,1.66547836370305,0.749613796477831,1.81092359517311,0.215567992932842,0.567318240503458,0.703804496655795,0,0.278047249225598,0,0.411564272815887,0,0.702213187313235,0,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0.630869845692382,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.758671603812327,0.342745537829186,0,0.203651327845314,0.193952487167626,0.420814919341911,0.252946148497029,0.295220295959204,0.470996183524124,0.370191491765402,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,0.963303539926752,1.99259867206745,0.163934945376675,0,1.89304931649754,1.95219372148319,2.15423397732799,0.477937595905104,0.891194696329576,0,0.809621403349789,0.292255857911312,0.395287777946524,0.963963949265421,0,0.35613120733451,0,0.164970122972535,1.32745138339963,0.728341908464944,0,0.188605079755898,0,1.22974059177571,0.258428293168221,0,0,0,0,0,3.06395645178409,1.08036656418786,1.4229455216103,1.50035924522115,2.83744373827638,2.31879462882692,1.81003922662333,2.13125464380219,0,0.42366414172764,0,0.16488625294148,0,0.120625849856312,0,0,0,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0,0.414599921413271,0,0.632671987162271,0.203319467126849,0.324016022465404,0.418176592028937,0,0.269728692769641,0,0,0,0,31.5668045663147,0.897099276263873,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.234714477291508,0.651021924219751,0.419437377702843,8.21386010808421,9.21696020025169,0,0,0,0,0.358053391334963,0.198681354781265,0,0,0.201932899896295,0,0,0,0.192423683280659,0.233753804363138,0.226730383615211,0.221985953374065,0.179427713218951,0.503653849092235,0.19318959403219,0.187682475451182,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,1.20297227640581,0,2.2661816921691,0.675022500231806,1.35096360967266,0.453142408984205,0,0.726511433089237,0,0.512200817262403,1.21553358534147,0,0,0.666740183404846,0.206035057238894,0,0,0,0.188626341386076,0.561849044819294,0.320125762024346,0.229741875822453,0,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.25384382367503,0,0.789209134313529,0.407412341537585,0,0,0,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0,0.191288332068843,0,0 | |||
|short_description=p@chr3:58380474..58380504,- | |||
}} |
Revision as of 02:21, 14 September 2013
Short description: | p@chr3:58380474..58380504, - |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:58380474..58380504, - |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.