FFCP PHASE1:Mm9::chr4:130490845..130490859,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16792|HGNC=|MCL_coexpression_id=38|UniProt=|association_with_transcript=-286bp_to_uc008uzw.1_5end|description=CAGE_peak_5_at_Laptm5_5end|id=chr4:130490845..130490859,+|ontology_enrichment_celltype=CL:0000988!3.57e-14!32;CL:0002032!3.57e-14!32;CL:0000037!3.57e-14!32;CL:0000566!3.57e-14!32;CL:0000837!3.57e-14!32;CL:0000738!9.23e-13!17;CL:0002087!9.23e-13!17;CL:0002031!1.82e-12!25;CL:0000838!2.21e-10!12;CL:0002320!6.93e-10!46;CL:0000134!6.93e-10!46;CL:0000084!1.45e-09!11;CL:0000827!1.45e-09!11;CL:0000542!3.38e-09!13;CL:0000051!3.38e-09!13;CL:0000791!4.53e-08!9;CL:0000789!4.53e-08!9;CL:0002420!4.53e-08!9;CL:0002419!4.53e-08!9;CL:0000790!4.53e-08!9;CL:0000219!1.05e-07!54;CL:0000624!2.99e-07!8|ontology_enrichment_celltype_v019_2=CL:0000988,3.85e-27,32;CL:0002032,3.85e-27,32;CL:0000037,3.85e-27,32;CL:0000837,3.85e-27,32;CL:0000738,4.23e-27,17;CL:0002087,4.23e-27,17;CL:0002320,1.59e-24,46;CL:0000134,1.59e-24,46;CL:0002031,5.97e-23,25;CL:0000219,4.36e-20,54;CL:0000838,3.44e-19,12;CL:0000542,1.47e-17,13;CL:0000051,1.47e-17,13;CL:0000084,5.32e-17,11;CL:0000827,5.32e-17,11;CL:0000034,2.95e-13,97;CL:0000791,5.33e-13,9;CL:0000789,5.33e-13,9;CL:0002420,5.33e-13,9;CL:0002419,5.33e-13,9;CL:0000790,5.33e-13,9;CL:0000557,8.88e-13,7;CL:0002194,1.36e-11,4;CL:0000766,1.36e-11,4;CL:0000234,1.36e-11,4;CL:0000576,1.36e-11,4;CL:0000235,1.36e-11,4;CL:0000864,1.36e-11,4;CL:0002009,1.36e-11,4;CL:0000040,1.36e-11,4;CL:0000559,1.36e-11,4;CL:0000049,1.73e-11,19;CL:0000624,7.09e-11,8;CL:0000723,7.57e-11,91;CL:0000048,7.57e-11,91;CL:0002092,2.48e-09,3;CL:0002540,2.48e-09,3;CL:0000763,6.03e-09,16;CL:0000839,7.15e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.39e-22!48;UBERON:0002390!4.90e-20!45;UBERON:0003061!4.90e-20!45;UBERON:0002405!1.03e-16!70;UBERON:0004177!1.83e-11!29;UBERON:0002384!6.93e-10!46;UBERON:0002371!1.95e-09!16;UBERON:0003408!2.26e-09!24;UBERON:0002370!7.21e-09!23;UBERON:0000974!7.21e-09!23;UBERON:0004807!7.21e-09!23;UBERON:0005058!7.21e-09!23;UBERON:0003351!7.21e-09!23;UBERON:0009113!7.21e-09!23;UBERON:0003295!7.21e-09!23;UBERON:0009722!7.21e-09!23;UBERON:0005562!7.21e-09!23;UBERON:0007690!7.21e-09!23;UBERON:0003081!8.45e-09!88;UBERON:0006562!3.26e-08!24;UBERON:0001557!3.26e-08!24;UBERON:0001042!3.26e-08!24;UBERON:0008814!3.26e-08!24;UBERON:0009145!3.26e-08!24;UBERON:0005057!1.43e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.59e-24,46;UBERON:0002193,4.76e-18,48;UBERON:0002405,4.76e-18,48;UBERON:0002371,7.64e-18,16;UBERON:0002390,8.84e-16,45;UBERON:0003061,8.84e-16,45;UBERON:0001474,1.28e-14,22;UBERON:0004765,1.28e-14,22;UBERON:0001434,1.28e-14,22;UBERON:0002204,6.54e-11,32;UBERON:0003081,6.12e-07,87|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,1.267098499365,1.40438715793196,0.856089841127525,0.478632953972018,3.93761678841773,3.2345548895029,0.333109761815663,0.404950534779652,0,2.68142840554502,2.05671650408608,0.42438965179803,0.17008658030214,1.78723712161594,2.35079810225042,2.07990149631429,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,2.09409497589519,2.35292595212406,3.41522742479223,3.88408282424923,0,0,0,0,0,0,0,0,0,3.02008690903925,4.35217285206807,3.02484419228218,0,0,0.515672092277442,0,0,0,0,0,13.9484456178617,27.6882581518753,27.7087244828979,5.69240209984969,4.99483796918021,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0.589257170947335,0.427115042397309,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.742210695324124,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,1.76922110389975,0,0,0,0,0,0.209446706813455,0,2.99537811264801,0.599902730993408,2.28726408731516,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.622034853050465,0,0,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.589676985339609,0,0.405720242777006,0,0.763877555344259,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,27.142431109069,5.4390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0.854354403989263,0.412773735926445,0.370389054739423,0.941842285023455,0.136694227721025,0.686334519619568,1.69978429993855,2.37917468950219,1.93479963326193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| ||
|EntrezGene=16792 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|UniProt= | |||
|association_with_transcript=-286bp_to_uc008uzw.1_5end | |||
|description=CAGE_peak_5_at_Laptm5_5end | |||
|id=chr4:130490845..130490859,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.57e-14!32;CL:0002032!3.57e-14!32;CL:0000037!3.57e-14!32;CL:0000566!3.57e-14!32;CL:0000837!3.57e-14!32;CL:0000738!9.23e-13!17;CL:0002087!9.23e-13!17;CL:0002031!1.82e-12!25;CL:0000838!2.21e-10!12;CL:0002320!6.93e-10!46;CL:0000134!6.93e-10!46;CL:0000084!1.45e-09!11;CL:0000827!1.45e-09!11;CL:0000542!3.38e-09!13;CL:0000051!3.38e-09!13;CL:0000791!4.53e-08!9;CL:0000789!4.53e-08!9;CL:0002420!4.53e-08!9;CL:0002419!4.53e-08!9;CL:0000790!4.53e-08!9;CL:0000219!1.05e-07!54;CL:0000624!2.99e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.85e-27,32;CL:0002032,3.85e-27,32;CL:0000037,3.85e-27,32;CL:0000837,3.85e-27,32;CL:0000738,4.23e-27,17;CL:0002087,4.23e-27,17;CL:0002320,1.59e-24,46;CL:0000134,1.59e-24,46;CL:0002031,5.97e-23,25;CL:0000219,4.36e-20,54;CL:0000838,3.44e-19,12;CL:0000542,1.47e-17,13;CL:0000051,1.47e-17,13;CL:0000084,5.32e-17,11;CL:0000827,5.32e-17,11;CL:0000034,2.95e-13,97;CL:0000791,5.33e-13,9;CL:0000789,5.33e-13,9;CL:0002420,5.33e-13,9;CL:0002419,5.33e-13,9;CL:0000790,5.33e-13,9;CL:0000557,8.88e-13,7;CL:0002194,1.36e-11,4;CL:0000766,1.36e-11,4;CL:0000234,1.36e-11,4;CL:0000576,1.36e-11,4;CL:0000235,1.36e-11,4;CL:0000864,1.36e-11,4;CL:0002009,1.36e-11,4;CL:0000040,1.36e-11,4;CL:0000559,1.36e-11,4;CL:0000049,1.73e-11,19;CL:0000624,7.09e-11,8;CL:0000723,7.57e-11,91;CL:0000048,7.57e-11,91;CL:0002092,2.48e-09,3;CL:0002540,2.48e-09,3;CL:0000763,6.03e-09,16;CL:0000839,7.15e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.39e-22!48;UBERON:0002390!4.90e-20!45;UBERON:0003061!4.90e-20!45;UBERON:0002405!1.03e-16!70;UBERON:0004177!1.83e-11!29;UBERON:0002384!6.93e-10!46;UBERON:0002371!1.95e-09!16;UBERON:0003408!2.26e-09!24;UBERON:0002370!7.21e-09!23;UBERON:0000974!7.21e-09!23;UBERON:0004807!7.21e-09!23;UBERON:0005058!7.21e-09!23;UBERON:0003351!7.21e-09!23;UBERON:0009113!7.21e-09!23;UBERON:0003295!7.21e-09!23;UBERON:0009722!7.21e-09!23;UBERON:0005562!7.21e-09!23;UBERON:0007690!7.21e-09!23;UBERON:0003081!8.45e-09!88;UBERON:0006562!3.26e-08!24;UBERON:0001557!3.26e-08!24;UBERON:0001042!3.26e-08!24;UBERON:0008814!3.26e-08!24;UBERON:0009145!3.26e-08!24;UBERON:0005057!1.43e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.59e-24,46;UBERON:0002193,4.76e-18,48;UBERON:0002405,4.76e-18,48;UBERON:0002371,7.64e-18,16;UBERON:0002390,8.84e-16,45;UBERON:0003061,8.84e-16,45;UBERON:0001474,1.28e-14,22;UBERON:0004765,1.28e-14,22;UBERON:0001434,1.28e-14,22;UBERON:0002204,6.54e-11,32;UBERON:0003081,6.12e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,1.267098499365,1.40438715793196,0.856089841127525,0.478632953972018,3.93761678841773,3.2345548895029,0.333109761815663,0.404950534779652,0,2.68142840554502,2.05671650408608,0.42438965179803,0.17008658030214,1.78723712161594,2.35079810225042,2.07990149631429,0.91763712426868,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0.7813353445238,2.09409497589519,2.35292595212406,3.41522742479223,3.88408282424923,0,0,0,0,0,0,0,0,0,3.02008690903925,4.35217285206807,3.02484419228218,0,0,0.515672092277442,0,0,0,0,0,13.9484456178617,27.6882581518753,27.7087244828979,5.69240209984969,4.99483796918021,0,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0.589257170947335,0.427115042397309,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0.742210695324124,0.173485326766136,0.304465478312141,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,1.76922110389975,0,0,0,0,0,0.209446706813455,0,2.99537811264801,0.599902730993408,2.28726408731516,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.622034853050465,0,0,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0.589676985339609,0,0.405720242777006,0,0.763877555344259,0.287696137450811,0.810676133875177,0,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,27.142431109069,5.4390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0,0.119372344003136,0,0,0.18542530201051,0.854354403989263,0.412773735926445,0.370389054739423,0.941842285023455,0.136694227721025,0.686334519619568,1.69978429993855,2.37917468950219,1.93479963326193,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.948033361884535,0.202725215290164,0,0.25984164595559,0.358053391334963,0.596044064343795,0.721172697119813,1.18151621739662,0.908698049533329,0.533447646584999,1.41156659191577,1.36441033035653,0.865906574762965,1.75315353272353,0,0,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0.409231043169689,0,0,0.749431733813838,0,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p5@Laptm5 | |||
}} |
Revision as of 03:57, 14 September 2013
Short description: | p5@Laptm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Laptm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | -286bp_to_uc008uzw.1_5end |
EntrezGene: | Laptm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.59e-24 | 46 |
hemolymphoid system | 4.76e-18 | 48 |
immune system | 4.76e-18 | 48 |
bone marrow | 7.64e-18 | 16 |
hematopoietic system | 8.84e-16 | 45 |
blood island | 8.84e-16 | 45 |
bone element | 1.28e-14 | 22 |
skeletal element | 1.28e-14 | 22 |
skeletal system | 1.28e-14 | 22 |
musculoskeletal system | 6.54e-11 | 32 |
lateral plate mesoderm | 6.12e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.