FFCP PHASE1:Mm9::chr5:14514929..14514951,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26875|HGNC=|MCL_coexpression_id=1|UniProt=E9QK94,E9QKM6,D3Z7K1,Q8CHE8,Q9QYX7|association_with_transcript=11bp_to_ENSMUST00000030691,ENSMUST00000071768,ENSMUST00000115309,NM_001110796,NM_011995,uc008wmh.2,uc008wmi.2_5end|description=CAGE_peak_2_at_Pclo_5end|id=chr5:14514929..14514951,+|ontology_enrichment_celltype=CL:0000117!1.28e-13!23;CL:0000337!1.28e-13!23;CL:0000540!2.29e-11!33;CL:0000047!2.29e-11!33;CL:0000031!2.29e-11!33;CL:0000404!2.29e-11!33;CL:0000221!2.72e-09!44;CL:0000133!2.72e-09!44;CL:0002319!4.85e-09!43;CL:0000393!1.91e-07!39;CL:0000211!1.91e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.12e-20,23;CL:0000337,5.12e-20,23;CL:0000540,1.47e-13,33;CL:0000047,1.47e-13,33;CL:0000031,1.47e-13,33;CL:0000404,1.47e-13,33;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39;CL:0000221,6.79e-09,44;CL:0000133,6.79e-09,44;CL:0002319,1.50e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.31e-28!71;UBERON:0003075!1.31e-28!71;UBERON:0007284!1.31e-28!71;UBERON:0000033!1.12e-26!63;UBERON:0001017!1.22e-26!73;UBERON:0005743!1.22e-26!73;UBERON:0000073!2.70e-26!75;UBERON:0001016!2.70e-26!75;UBERON:0001049!6.34e-26!52;UBERON:0005068!6.34e-26!52;UBERON:0006241!6.34e-26!52;UBERON:0007135!6.34e-26!52;UBERON:0000955!5.60e-25!50;UBERON:0006238!5.60e-25!50;UBERON:0004121!1.01e-24!102;UBERON:0000924!1.01e-24!102;UBERON:0006601!1.01e-24!102;UBERON:0002616!2.50e-24!49;UBERON:0003056!1.40e-22!49;UBERON:0003080!3.19e-20!40;UBERON:0002020!7.48e-20!34;UBERON:0002780!1.53e-19!39;UBERON:0001890!1.53e-19!39;UBERON:0006240!1.53e-19!39;UBERON:0002791!7.04e-17!29;UBERON:0003528!7.04e-17!29;UBERON:0001893!7.04e-17!29;UBERON:0007811!1.25e-15!86;UBERON:0000153!3.81e-13!94;UBERON:0000956!4.15e-12!21;UBERON:0001869!4.15e-12!21;UBERON:0000203!4.15e-12!21;UBERON:0002619!3.80e-10!17;UBERON:0002021!3.22e-08!10;UBERON:0000411!3.22e-08!10;UBERON:0001950!3.22e-08!10;UBERON:0000468!8.69e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.97e-36,54;UBERON:0002346,3.09e-35,64;UBERON:0003075,3.09e-35,64;UBERON:0007284,3.09e-35,64;UBERON:0001049,5.05e-34,52;UBERON:0005068,5.05e-34,52;UBERON:0006241,5.05e-34,52;UBERON:0007135,5.05e-34,52;UBERON:0001017,4.17e-32,73;UBERON:0001016,9.83e-31,75;UBERON:0010371,1.04e-29,73;UBERON:0000955,3.12e-29,47;UBERON:0006238,3.12e-29,47;UBERON:0004121,1.28e-28,95;UBERON:0000924,1.28e-28,95;UBERON:0006601,1.28e-28,95;UBERON:0003056,2.48e-28,49;UBERON:0002616,2.73e-28,46;UBERON:0002020,1.09e-27,34;UBERON:0003080,4.30e-26,40;UBERON:0002780,4.42e-25,39;UBERON:0001890,4.42e-25,39;UBERON:0006240,4.42e-25,39;UBERON:0003528,3.68e-23,29;UBERON:0002791,3.68e-23,29;UBERON:0001893,3.68e-23,29;UBERON:0010314,9.01e-20,92;UBERON:0000956,6.35e-16,21;UBERON:0001869,6.35e-16,21;UBERON:0000203,6.35e-16,21;UBERON:0002619,6.20e-13,17;UBERON:0002021,9.44e-12,10;UBERON:0000411,9.44e-12,10;UBERON:0001950,9.44e-12,10;UBERON:0002420,2.13e-08,8;UBERON:0007245,2.13e-08,8;UBERON:0010009,2.13e-08,8;UBERON:0010011,2.13e-08,8;UBERON:0000454,2.13e-08,8;UBERON:0003076,3.84e-08,12;UBERON:0003057,3.84e-08,12;UBERON:0000025,2.51e-07,114|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,4.24864567805155,8.99284664762456,4.43681982454325,0,0,0,0,0,0.299600110518405,0,3.7328260431052,2.56511282830212,2.10324961351382,5.71301968807607,3.97563373712904,2.9397791811589,2.68367318851062,3.67687514644008,13.2139057199266,15.1947932321373,17.2039317246993,5.67111037239834,6.03818447775904,3.64639359389732,10.8881369610539,12.380777420697,13.4462458043593,10.606629077052,13.3829379951157,8.76077395378913,0.075726193333184,0.453429360640713,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.470354828542819,0.376999773989026,0,0.433798070759735,0,0.161766849947409,0,0,0,16.1029438356351,14.8707161837553,0,0,0,0,12.5824137100051,16.4700217014706,8.67015029578764,17.5562563394199,17.3886510984625,14.9607392082883,13.4660248346239,0.101839363850316,0,0.505445516867349,1.68353484709179,0.520481771850815,0.229902104433473,1.0803727788321,1.05493372485001,2.04109497453984,2.3060469651273,2.15513966487376,5.43277078551933,0.215567992932842,0.378212160335639,0,0,0,0,0.411564272815887,0.398068533636986,0,0,0,0,0.469052119962192,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0,0,12.4071069652835,7.30622747892919,0,0.264450566663544,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0.581857461502877,0.49095073923223,1.01178459398812,1.03327103585722,0.78499363920687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| ||
|EntrezGene=26875 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9QK94,E9QKM6,D3Z7K1,Q8CHE8,Q9QYX7 | |||
|association_with_transcript=11bp_to_ENSMUST00000030691,ENSMUST00000071768,ENSMUST00000115309,NM_001110796,NM_011995,uc008wmh.2,uc008wmi.2_5end | |||
|description=CAGE_peak_2_at_Pclo_5end | |||
|id=chr5:14514929..14514951,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.28e-13!23;CL:0000337!1.28e-13!23;CL:0000540!2.29e-11!33;CL:0000047!2.29e-11!33;CL:0000031!2.29e-11!33;CL:0000404!2.29e-11!33;CL:0000221!2.72e-09!44;CL:0000133!2.72e-09!44;CL:0002319!4.85e-09!43;CL:0000393!1.91e-07!39;CL:0000211!1.91e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.12e-20,23;CL:0000337,5.12e-20,23;CL:0000540,1.47e-13,33;CL:0000047,1.47e-13,33;CL:0000031,1.47e-13,33;CL:0000404,1.47e-13,33;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39;CL:0000221,6.79e-09,44;CL:0000133,6.79e-09,44;CL:0002319,1.50e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.31e-28!71;UBERON:0003075!1.31e-28!71;UBERON:0007284!1.31e-28!71;UBERON:0000033!1.12e-26!63;UBERON:0001017!1.22e-26!73;UBERON:0005743!1.22e-26!73;UBERON:0000073!2.70e-26!75;UBERON:0001016!2.70e-26!75;UBERON:0001049!6.34e-26!52;UBERON:0005068!6.34e-26!52;UBERON:0006241!6.34e-26!52;UBERON:0007135!6.34e-26!52;UBERON:0000955!5.60e-25!50;UBERON:0006238!5.60e-25!50;UBERON:0004121!1.01e-24!102;UBERON:0000924!1.01e-24!102;UBERON:0006601!1.01e-24!102;UBERON:0002616!2.50e-24!49;UBERON:0003056!1.40e-22!49;UBERON:0003080!3.19e-20!40;UBERON:0002020!7.48e-20!34;UBERON:0002780!1.53e-19!39;UBERON:0001890!1.53e-19!39;UBERON:0006240!1.53e-19!39;UBERON:0002791!7.04e-17!29;UBERON:0003528!7.04e-17!29;UBERON:0001893!7.04e-17!29;UBERON:0007811!1.25e-15!86;UBERON:0000153!3.81e-13!94;UBERON:0000956!4.15e-12!21;UBERON:0001869!4.15e-12!21;UBERON:0000203!4.15e-12!21;UBERON:0002619!3.80e-10!17;UBERON:0002021!3.22e-08!10;UBERON:0000411!3.22e-08!10;UBERON:0001950!3.22e-08!10;UBERON:0000468!8.69e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.97e-36,54;UBERON:0002346,3.09e-35,64;UBERON:0003075,3.09e-35,64;UBERON:0007284,3.09e-35,64;UBERON:0001049,5.05e-34,52;UBERON:0005068,5.05e-34,52;UBERON:0006241,5.05e-34,52;UBERON:0007135,5.05e-34,52;UBERON:0001017,4.17e-32,73;UBERON:0001016,9.83e-31,75;UBERON:0010371,1.04e-29,73;UBERON:0000955,3.12e-29,47;UBERON:0006238,3.12e-29,47;UBERON:0004121,1.28e-28,95;UBERON:0000924,1.28e-28,95;UBERON:0006601,1.28e-28,95;UBERON:0003056,2.48e-28,49;UBERON:0002616,2.73e-28,46;UBERON:0002020,1.09e-27,34;UBERON:0003080,4.30e-26,40;UBERON:0002780,4.42e-25,39;UBERON:0001890,4.42e-25,39;UBERON:0006240,4.42e-25,39;UBERON:0003528,3.68e-23,29;UBERON:0002791,3.68e-23,29;UBERON:0001893,3.68e-23,29;UBERON:0010314,9.01e-20,92;UBERON:0000956,6.35e-16,21;UBERON:0001869,6.35e-16,21;UBERON:0000203,6.35e-16,21;UBERON:0002619,6.20e-13,17;UBERON:0002021,9.44e-12,10;UBERON:0000411,9.44e-12,10;UBERON:0001950,9.44e-12,10;UBERON:0002420,2.13e-08,8;UBERON:0007245,2.13e-08,8;UBERON:0010009,2.13e-08,8;UBERON:0010011,2.13e-08,8;UBERON:0000454,2.13e-08,8;UBERON:0003076,3.84e-08,12;UBERON:0003057,3.84e-08,12;UBERON:0000025,2.51e-07,114 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74190476664707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0,0,0,4.24864567805155,8.99284664762456,4.43681982454325,0,0,0,0,0,0.299600110518405,0,3.7328260431052,2.56511282830212,2.10324961351382,5.71301968807607,3.97563373712904,2.9397791811589,2.68367318851062,3.67687514644008,13.2139057199266,15.1947932321373,17.2039317246993,5.67111037239834,6.03818447775904,3.64639359389732,10.8881369610539,12.380777420697,13.4462458043593,10.606629077052,13.3829379951157,8.76077395378913,0.075726193333184,0.453429360640713,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0.608930956624282,0.230615497256059,0.60289056221049,0.470354828542819,0.376999773989026,0,0.433798070759735,0,0.161766849947409,0,0,0,16.1029438356351,14.8707161837553,0,0,0,0,12.5824137100051,16.4700217014706,8.67015029578764,17.5562563394199,17.3886510984625,14.9607392082883,13.4660248346239,0.101839363850316,0,0.505445516867349,1.68353484709179,0.520481771850815,0.229902104433473,1.0803727788321,1.05493372485001,2.04109497453984,2.3060469651273,2.15513966487376,5.43277078551933,0.215567992932842,0.378212160335639,0,0,0,0,0.411564272815887,0.398068533636986,0,0,0,0,0.469052119962192,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0,0,0,12.4071069652835,7.30622747892919,0,0.264450566663544,0.639864751605702,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.596869416123452,0.19496408711912,0,0.216138049874694,0,0,0.342745537829186,0,0,0.581857461502877,0.49095073923223,1.01178459398812,1.03327103585722,0.784993639206874,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0.37898282354097,0.162964976442026,0,0.938760993154008,0.167506257441816,0,0.585400943573396,0,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,10.5963389391943,11.0178985396671,0,0,0.94652465824877,0.390438744296638,1.07711698866399,0,0,0,0.404810701674894,0.876767573733936,1.58115111178609,9.63963949265421,0,0,0.162886959353576,0,1.32745138339963,0.728341908464944,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,1.03371317267288,0.363533729477506,1.42598951353889,0.632073515871632,0,2.06271086496374,5.7874732978144,0.18006109403131,0.258717367565509,1.07168517515796,3.54680467284547,2.14042581122485,1.48094118541909,0.913394847343798,0.23467170806371,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,12.0526446306831,0,0.206386867963223,0,0,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.540026704109006,0.836353184057875,0.655087691238533,0.539457385539283,0.41326727862668,0,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.234714477291508,0,0.524296722128554,0.724752362478018,0.288030006257865,0.316011120628178,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0,0.147689527174577,0.201932899896295,0.228620419965,0.302478555410522,0,0,0.233753804363138,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,23.1548255472997,11.0478056761722,14.3223878359849,15.2949332285882,9.59115527678899,25.6833925112498,12.8254275044043,11.7083512838297,18.5788387683524,24.3347346523355,0.62272408550506,0.798049746802062,0,0.972426868273176,1.46729213839588,1.83843508450014,0.44449345560323,1.44224540067226,1.60459604795908,1.01078884705519,1.77435509923168,1.88626341386076,1.49826411951812,2.62503124859964,3.0440798546475,2.38146845641537,3.01299247456624,2.89363830695558,0.824171801606613,1.61918812147837,1.02860775715625,1.59728225543404,1.66905332963125,2.18019624948493,1.41164070622996,1.94613598150856,1.46342378298218,1.57841826862706,2.44447404922551,0,1.66089025373844,1.87158516513571,1.22769312950907,2.16911577660352,1.54325288784913,4.49659040288303,1.63752125911786,2.14871054048298,0.57386499620653,0.441182838239031,0 | |||
|short_description=p2@Pclo | |||
}} |
Revision as of 06:59, 14 September 2013
Short description: | p2@Pclo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pclo_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 11bp_to_ENSMUST00000030691, ENSMUST00000071768, ENSMUST00000115309, NM_001110796, NM_011995, uc008wmh.2, uc008wmi.2_5end |
EntrezGene: | Pclo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.12e-20 | 23 |
neuroblast (sensu Vertebrata) | 5.12e-20 | 23 |
neuron | 1.47e-13 | 33 |
neuronal stem cell | 1.47e-13 | 33 |
neuroblast | 1.47e-13 | 33 |
electrically signaling cell | 1.47e-13 | 33 |
electrically responsive cell | 3.22e-10 | 39 |
electrically active cell | 3.22e-10 | 39 |
ectodermal cell | 6.79e-09 | 44 |
neurectodermal cell | 6.79e-09 | 44 |
neural cell | 1.50e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.