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FFCP PHASE1:Mm9::chr5:77524043..77524064,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74318|HGNC=|UniProt=Q8R1H0|association_with_transcript=213bp_to_ENSMUST00000120827_5end|description=CAGE_peak_9_at_Hopx_5end|id=chr5:77524043..77524064,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,3.99e-09,3;CL:0000117,6.23e-08,23;CL:0000337,6.23e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.69e-10!52;UBERON:0005068!2.69e-10!52;UBERON:0006241!2.69e-10!52;UBERON:0007135!2.69e-10!52;UBERON:0000025!8.83e-10!114;UBERON:0004111!4.48e-09!122;UBERON:0000955!6.82e-09!50;UBERON:0006238!6.82e-09!50;UBERON:0002616!1.66e-08!49;UBERON:0002020!2.27e-08!34;UBERON:0000033!2.89e-08!63;UBERON:0002346!1.08e-07!71;UBERON:0003075!1.08e-07!71;UBERON:0007284!1.08e-07!71;UBERON:0001017!4.51e-07!73;UBERON:0005743!4.51e-07!73;UBERON:0003056!5.27e-07!49;UBERON:0000073!8.78e-07!75;UBERON:0001016!8.78e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.51e-15,54;UBERON:0001049,1.97e-14,52;UBERON:0005068,1.97e-14,52;UBERON:0006241,1.97e-14,52;UBERON:0007135,1.97e-14,52;UBERON:0003076,5.79e-14,12;UBERON:0003057,5.79e-14,12;UBERON:0001017,8.64e-13,73;UBERON:0001016,2.57e-12,75;UBERON:0002346,3.27e-12,64;UBERON:0003075,3.27e-12,64;UBERON:0007284,3.27e-12,64;UBERON:0002020,3.30e-12,34;UBERON:0002240,1.89e-11,6;UBERON:0005174,1.89e-11,6;UBERON:0001137,1.89e-11,6;UBERON:0002950,3.03e-11,4;UBERON:0001891,3.03e-11,4;UBERON:0009616,3.03e-11,4;UBERON:0010286,3.03e-11,4;UBERON:0010371,3.77e-10,73;UBERON:0004121,1.14e-09,95;UBERON:0000924,1.14e-09,95;UBERON:0006601,1.14e-09,95;UBERON:0000025,2.90e-09,114;UBERON:0004111,3.62e-09,122;UBERON:0002038,3.99e-09,3;UBERON:0009663,3.99e-09,3;UBERON:0009661,3.99e-09,3;UBERON:0000125,3.99e-09,3;UBERON:0002308,3.99e-09,3;UBERON:0010314,4.81e-09,92;UBERON:0001948,5.13e-09,5;UBERON:0002315,5.13e-09,5;UBERON:0002616,2.58e-08,46;UBERON:0000955,4.49e-08,47;UBERON:0006238,4.49e-08,47;UBERON:0003528,4.21e-07,29;UBERON:0002791,4.21e-07,29;UBERON:0001893,4.21e-07,29|phase1_expression=0,0,0,0,0.500895729946347,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,1.41957974411207,0.274228867211478,0.42438965179803,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,1.84519436275371,0,0.288851619751275,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0,0,0,1.09843091367236,0.58328969722285,0.139986421625363,1.43752564364972,0.503347818173209,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,1.42825492201902,1.32521124570968,0.244981598429908,0,0,1.10115880999389,1.14918604276669,0.614426133024974,0.131886287730194,0.365950574409639,0,1.67509799400829,2.25105044012672,1.68078072554491,2.06240009831567,1.85083185038834,0.559198337475902,0.151452386666368,0,0,0,0,0,1.29955283489534,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,4.1889341362691,0.255457055208591,0,0,0,1.19832511523858,2.28750301409313,0.125654352112864,1.04294592115366,0.255715457330331,0.62336413367868,0.648965052271031,0.101839363850316,0.622034853050465,1.26361379216837,0.631325567659422,0,0.229902104433473,0,1.05493372485001,0.748401490664606,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0,0,0.556094498451196,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0,0.590292695242212,0.462801338662135,0,0.268273401399619,0.467061369468678,0.658239399653922,1.14917224855367,1.13496333364198,0.584799949701329,0.439100230582101,0.536825675041487,0.841159794256509,0.308713837137853,0,0,0,0.232236671860439,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0,0.339490171550376,0.938760993154008,2.34508760418542,0.952174563544055,2.34160377429359,0.472905432318573,0.44292937929755,0.478364305972461,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0.987294123612726,0,0,0.21183207086382,0.441056796109924,0.32977250588296,0.322928853391811,0.180938774784468,0.238744688006273,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0.69975726161829,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,1.00314420807073,1.12950368523413,1.38097570952153,1.14579102687879,0.343706364687375,0.685082519770642,0,1.35004500046361,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.760437899670719,0,0.280924522409647,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.365855945745545,1.31534855718921,0.135804113845862,1.12228454331548,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.57386499620653,0,0|short_description=p9@Hopx}}
|EntrezGene=74318
|HGNC=
|UniProt=Q8R1H0
|association_with_transcript=213bp_to_ENSMUST00000120827_5end
|description=CAGE_peak_9_at_Hopx_5end
|id=chr5:77524043..77524064,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002614,3.99e-09,3;CL:0000117,6.23e-08,23;CL:0000337,6.23e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.69e-10!52;UBERON:0005068!2.69e-10!52;UBERON:0006241!2.69e-10!52;UBERON:0007135!2.69e-10!52;UBERON:0000025!8.83e-10!114;UBERON:0004111!4.48e-09!122;UBERON:0000955!6.82e-09!50;UBERON:0006238!6.82e-09!50;UBERON:0002616!1.66e-08!49;UBERON:0002020!2.27e-08!34;UBERON:0000033!2.89e-08!63;UBERON:0002346!1.08e-07!71;UBERON:0003075!1.08e-07!71;UBERON:0007284!1.08e-07!71;UBERON:0001017!4.51e-07!73;UBERON:0005743!4.51e-07!73;UBERON:0003056!5.27e-07!49;UBERON:0000073!8.78e-07!75;UBERON:0001016!8.78e-07!75
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.51e-15,54;UBERON:0001049,1.97e-14,52;UBERON:0005068,1.97e-14,52;UBERON:0006241,1.97e-14,52;UBERON:0007135,1.97e-14,52;UBERON:0003076,5.79e-14,12;UBERON:0003057,5.79e-14,12;UBERON:0001017,8.64e-13,73;UBERON:0001016,2.57e-12,75;UBERON:0002346,3.27e-12,64;UBERON:0003075,3.27e-12,64;UBERON:0007284,3.27e-12,64;UBERON:0002020,3.30e-12,34;UBERON:0002240,1.89e-11,6;UBERON:0005174,1.89e-11,6;UBERON:0001137,1.89e-11,6;UBERON:0002950,3.03e-11,4;UBERON:0001891,3.03e-11,4;UBERON:0009616,3.03e-11,4;UBERON:0010286,3.03e-11,4;UBERON:0010371,3.77e-10,73;UBERON:0004121,1.14e-09,95;UBERON:0000924,1.14e-09,95;UBERON:0006601,1.14e-09,95;UBERON:0000025,2.90e-09,114;UBERON:0004111,3.62e-09,122;UBERON:0002038,3.99e-09,3;UBERON:0009663,3.99e-09,3;UBERON:0009661,3.99e-09,3;UBERON:0000125,3.99e-09,3;UBERON:0002308,3.99e-09,3;UBERON:0010314,4.81e-09,92;UBERON:0001948,5.13e-09,5;UBERON:0002315,5.13e-09,5;UBERON:0002616,2.58e-08,46;UBERON:0000955,4.49e-08,47;UBERON:0006238,4.49e-08,47;UBERON:0003528,4.21e-07,29;UBERON:0002791,4.21e-07,29;UBERON:0001893,4.21e-07,29
|phase1_expression=0,0,0,0,0.500895729946347,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,1.41957974411207,0.274228867211478,0.42438965179803,0.510259740906419,0,0,0.47997726838022,0.22940928106717,0.57423196411502,0.430761996159075,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,1.84519436275371,0,0.288851619751275,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0,0,0,1.09843091367236,0.58328969722285,0.139986421625363,1.43752564364972,0.503347818173209,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,1.42825492201902,1.32521124570968,0.244981598429908,0,0,1.10115880999389,1.14918604276669,0.614426133024974,0.131886287730194,0.365950574409639,0,1.67509799400829,2.25105044012672,1.68078072554491,2.06240009831567,1.85083185038834,0.559198337475902,0.151452386666368,0,0,0,0,0,1.29955283489534,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,4.1889341362691,0.255457055208591,0,0,0,1.19832511523858,2.28750301409313,0.125654352112864,1.04294592115366,0.255715457330331,0.62336413367868,0.648965052271031,0.101839363850316,0.622034853050465,1.26361379216837,0.631325567659422,0,0.229902104433473,0,1.05493372485001,0.748401490664606,0.384341160854549,0.374806898238915,0.258703370739016,0,0,0,0,0.556094498451196,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0,0.590292695242212,0.462801338662135,0,0.268273401399619,0.467061369468678,0.658239399653922,1.14917224855367,1.13496333364198,0.584799949701329,0.439100230582101,0.536825675041487,0.841159794256509,0.308713837137853,0,0,0,0.232236671860439,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0,0.251335208800269,0.397912944082302,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0.482443521363367,0.184753190166605,0,0,0.339490171550376,0.938760993154008,2.34508760418542,0.952174563544055,2.34160377429359,0.472905432318573,0.44292937929755,0.478364305972461,0.163863314715738,0.518054945597687,0.578596234326046,0,0,0,0,1.44495530989013,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0.987294123612726,0,0,0.21183207086382,0.441056796109924,0.32977250588296,0.322928853391811,0.180938774784468,0.238744688006273,0,0,2.03967832211561,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0.69975726161829,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.104859344425711,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,1.00314420807073,1.12950368523413,1.38097570952153,1.14579102687879,0.343706364687375,0.685082519770642,0,1.35004500046361,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.760437899670719,0,0.280924522409647,0.256100609619477,0.229741875822453,0,0.115884325944855,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.365855945745545,1.31534855718921,0.135804113845862,1.12228454331548,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0.57386499620653,0,0
|short_description=p9@Hopx
}}

Revision as of 08:03, 14 September 2013

Short description:p9@Hopx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Hopx_5end
Coexpression cluster:NA
Association with transcript: 213bp_to_ENSMUST00000120827_5end
EntrezGene:Hopx
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p9@Hopx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the substantia nigra3.99e-093
CNS neuron (sensu Vertebrata)6.23e-0823
neuroblast (sensu Vertebrata)6.23e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.51e-1554
neural tube1.97e-1452
neural rod1.97e-1452
future spinal cord1.97e-1452
neural keel1.97e-1452
posterior neural tube5.79e-1412
chordal neural plate5.79e-1412
central nervous system8.64e-1373
nervous system2.57e-1275
neurectoderm3.27e-1264
neural plate3.27e-1264
presumptive neural plate3.27e-1264
gray matter3.30e-1234
spinal cord1.89e-116
dorsal region element1.89e-116
dorsum1.89e-116
regional part of midbrain3.03e-114
midbrain3.03e-114
presumptive midbrain3.03e-114
midbrain neural tube3.03e-114
ecto-epithelium3.77e-1073
ectoderm-derived structure1.14e-0995
ectoderm1.14e-0995
presumptive ectoderm1.14e-0995
tube2.90e-09114
anatomical conduit3.62e-09122
substantia nigra3.99e-093
telencephalic nucleus3.99e-093
midbrain nucleus3.99e-093
neural nucleus3.99e-093
nucleus of brain3.99e-093
structure with developmental contribution from neural crest4.81e-0992
regional part of spinal cord5.13e-095
gray matter of spinal cord5.13e-095
regional part of brain2.58e-0846
brain4.49e-0847
future brain4.49e-0847
brain grey matter4.21e-0729
regional part of telencephalon4.21e-0729
telencephalon4.21e-0729







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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