FFCP PHASE1:Mm9::chr7:103843314..103843326,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1474|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:103843314..103843326,+|id=chr7:103843314..103843326,+|ontology_enrichment_celltype=CL:0000117!1.47e-09!23;CL:0000337!1.47e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-15,23;CL:0000337,2.17e-15,23;CL:0000540,7.95e-10,33;CL:0000047,7.95e-10,33;CL:0000031,7.95e-10,33;CL:0000404,7.95e-10,33;CL:0000393,7.14e-08,39;CL:0000211,7.14e-08,39;CL:0002613,9.08e-08,3;CL:0002319,7.01e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.67e-21!52;UBERON:0005068!1.67e-21!52;UBERON:0006241!1.67e-21!52;UBERON:0007135!1.67e-21!52;UBERON:0000955!5.15e-19!50;UBERON:0006238!5.15e-19!50;UBERON:0002346!2.37e-18!71;UBERON:0003075!2.37e-18!71;UBERON:0007284!2.37e-18!71;UBERON:0002616!2.67e-18!49;UBERON:0000033!3.26e-18!63;UBERON:0003056!8.77e-18!49;UBERON:0003080!4.23e-17!40;UBERON:0001017!1.34e-16!73;UBERON:0005743!1.34e-16!73;UBERON:0002780!1.70e-16!39;UBERON:0001890!1.70e-16!39;UBERON:0006240!1.70e-16!39;UBERON:0004121!4.52e-16!102;UBERON:0000924!4.52e-16!102;UBERON:0006601!4.52e-16!102;UBERON:0000073!6.81e-16!75;UBERON:0001016!6.81e-16!75;UBERON:0002020!8.02e-16!34;UBERON:0000153!1.44e-13!94;UBERON:0002791!9.32e-13!29;UBERON:0003528!9.32e-13!29;UBERON:0001893!9.32e-13!29;UBERON:0007811!6.84e-11!86;UBERON:0000956!5.46e-10!21;UBERON:0001869!5.46e-10!21;UBERON:0000203!5.46e-10!21;UBERON:0002021!7.51e-08!10;UBERON:0000411!7.51e-08!10;UBERON:0001950!7.51e-08!10;UBERON:0002619!1.52e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.84e-22,34;UBERON:0000073,3.79e-19,54;UBERON:0001049,6.93e-18,52;UBERON:0005068,6.93e-18,52;UBERON:0006241,6.93e-18,52;UBERON:0007135,6.93e-18,52;UBERON:0001017,5.99e-17,73;UBERON:0001016,2.48e-16,75;UBERON:0003528,4.53e-16,29;UBERON:0002791,4.53e-16,29;UBERON:0001893,4.53e-16,29;UBERON:0002021,5.48e-15,10;UBERON:0000411,5.48e-15,10;UBERON:0001950,5.48e-15,10;UBERON:0002346,6.38e-15,64;UBERON:0003075,6.38e-15,64;UBERON:0007284,6.38e-15,64;UBERON:0003080,4.60e-14,40;UBERON:0000955,5.72e-13,47;UBERON:0006238,5.72e-13,47;UBERON:0002780,7.78e-13,39;UBERON:0001890,7.78e-13,39;UBERON:0006240,7.78e-13,39;UBERON:0004121,1.07e-12,95;UBERON:0000924,1.07e-12,95;UBERON:0006601,1.07e-12,95;UBERON:0000956,1.72e-12,21;UBERON:0001869,1.72e-12,21;UBERON:0000203,1.72e-12,21;UBERON:0010371,2.10e-12,73;UBERON:0003056,4.19e-12,49;UBERON:0002616,1.07e-11,46;UBERON:0002240,8.51e-10,6;UBERON:0005174,8.51e-10,6;UBERON:0001137,8.51e-10,6;UBERON:0010314,9.91e-09,92;UBERON:0002619,3.25e-08,17;UBERON:0001948,4.89e-08,5;UBERON:0002315,4.89e-08,5;UBERON:0000369,8.44e-08,5;UBERON:0002435,8.44e-08,5;UBERON:0000204,8.44e-08,5;UBERON:0010082,8.44e-08,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0.599200221036809,0.768436610643109,2.17748185847803,4.86021377994086,1.47227472945967,1.42825492201902,1.32521124570968,0.734944795289724,0.862609239164127,0.919218786610021,0,2.29837208553338,1.53606533256243,1.18697658957174,1.64677758484337,1.56274011167028,0.837548997004143,0,0.61119299110724,1.76777151284201,1.85083185038834,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.04853447583376,1.37250180845588,0.502617408451458,0.695297280769106,1.02286182932132,2.0778804455956,0.811206315338788,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,1.04096354370163,0,0.540186389416048,0.90422890701429,0.748401490664606,0.512454881139399,0.468508622798644,0,1.29340795759705,1.13463648100692,0.879755620819744,0.657587197282725,0.556094498451196,1.0447564995665,1.23469281844766,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.571242563048644,0,0.814605311381257,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.60660658210904,2.55492153374884,0.712262414669021,1.14020871547503,0.329940245945071,0,0.971122544619926,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.428674070063185,0.709360934569094,0.713475270408282,0.493647061806363,0.913394847343798,0.23467170806371,0,0,0.8244312647074,0.322928853391811,0.542816324353403,0.716234064018819,0.492422699235184,0,1.11255181206306,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0.777804753376191,1.03327858782185,1.01373675294467,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.77952493786677,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,1.84130094602871,1.14579102687879,1.3748254587495,2.74033007908257,1.5107877947794,2.02506750069542,1.80128481289688,0.906284817968409,2.07104124700728,0.31136204275253,1.99512436700516,0.341467211508268,0.486213434136588,0.419226325255965,0,0.222246727801615,0.618105171716683,0,0,0,0,0.37456602987953,0.448176066834085,0.402048282689293,0.476293691283074,0,0.77163688185482,0.412085900803307,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,1.28922632428979,0,0.441182838239031,0|short_description=p@chr7:103843314..103843326,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1474 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:103843314..103843326,+ | |||
|id=chr7:103843314..103843326,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.47e-09!23;CL:0000337!1.47e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-15,23;CL:0000337,2.17e-15,23;CL:0000540,7.95e-10,33;CL:0000047,7.95e-10,33;CL:0000031,7.95e-10,33;CL:0000404,7.95e-10,33;CL:0000393,7.14e-08,39;CL:0000211,7.14e-08,39;CL:0002613,9.08e-08,3;CL:0002319,7.01e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.67e-21!52;UBERON:0005068!1.67e-21!52;UBERON:0006241!1.67e-21!52;UBERON:0007135!1.67e-21!52;UBERON:0000955!5.15e-19!50;UBERON:0006238!5.15e-19!50;UBERON:0002346!2.37e-18!71;UBERON:0003075!2.37e-18!71;UBERON:0007284!2.37e-18!71;UBERON:0002616!2.67e-18!49;UBERON:0000033!3.26e-18!63;UBERON:0003056!8.77e-18!49;UBERON:0003080!4.23e-17!40;UBERON:0001017!1.34e-16!73;UBERON:0005743!1.34e-16!73;UBERON:0002780!1.70e-16!39;UBERON:0001890!1.70e-16!39;UBERON:0006240!1.70e-16!39;UBERON:0004121!4.52e-16!102;UBERON:0000924!4.52e-16!102;UBERON:0006601!4.52e-16!102;UBERON:0000073!6.81e-16!75;UBERON:0001016!6.81e-16!75;UBERON:0002020!8.02e-16!34;UBERON:0000153!1.44e-13!94;UBERON:0002791!9.32e-13!29;UBERON:0003528!9.32e-13!29;UBERON:0001893!9.32e-13!29;UBERON:0007811!6.84e-11!86;UBERON:0000956!5.46e-10!21;UBERON:0001869!5.46e-10!21;UBERON:0000203!5.46e-10!21;UBERON:0002021!7.51e-08!10;UBERON:0000411!7.51e-08!10;UBERON:0001950!7.51e-08!10;UBERON:0002619!1.52e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.84e-22,34;UBERON:0000073,3.79e-19,54;UBERON:0001049,6.93e-18,52;UBERON:0005068,6.93e-18,52;UBERON:0006241,6.93e-18,52;UBERON:0007135,6.93e-18,52;UBERON:0001017,5.99e-17,73;UBERON:0001016,2.48e-16,75;UBERON:0003528,4.53e-16,29;UBERON:0002791,4.53e-16,29;UBERON:0001893,4.53e-16,29;UBERON:0002021,5.48e-15,10;UBERON:0000411,5.48e-15,10;UBERON:0001950,5.48e-15,10;UBERON:0002346,6.38e-15,64;UBERON:0003075,6.38e-15,64;UBERON:0007284,6.38e-15,64;UBERON:0003080,4.60e-14,40;UBERON:0000955,5.72e-13,47;UBERON:0006238,5.72e-13,47;UBERON:0002780,7.78e-13,39;UBERON:0001890,7.78e-13,39;UBERON:0006240,7.78e-13,39;UBERON:0004121,1.07e-12,95;UBERON:0000924,1.07e-12,95;UBERON:0006601,1.07e-12,95;UBERON:0000956,1.72e-12,21;UBERON:0001869,1.72e-12,21;UBERON:0000203,1.72e-12,21;UBERON:0010371,2.10e-12,73;UBERON:0003056,4.19e-12,49;UBERON:0002616,1.07e-11,46;UBERON:0002240,8.51e-10,6;UBERON:0005174,8.51e-10,6;UBERON:0001137,8.51e-10,6;UBERON:0010314,9.91e-09,92;UBERON:0002619,3.25e-08,17;UBERON:0001948,4.89e-08,5;UBERON:0002315,4.89e-08,5;UBERON:0000369,8.44e-08,5;UBERON:0002435,8.44e-08,5;UBERON:0000204,8.44e-08,5;UBERON:0010082,8.44e-08,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0.599200221036809,0.768436610643109,2.17748185847803,4.86021377994086,1.47227472945967,1.42825492201902,1.32521124570968,0.734944795289724,0.862609239164127,0.919218786610021,0,2.29837208553338,1.53606533256243,1.18697658957174,1.64677758484337,1.56274011167028,0.837548997004143,0,0.61119299110724,1.76777151284201,1.85083185038834,0.559198337475902,0.075726193333184,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.04853447583376,1.37250180845588,0.502617408451458,0.695297280769106,1.02286182932132,2.0778804455956,0.811206315338788,0.305518091550949,0.124406970610093,0.252722758433675,0.210441855886474,1.04096354370163,0,0.540186389416048,0.90422890701429,0.748401490664606,0.512454881139399,0.468508622798644,0,1.29340795759705,1.13463648100692,0.879755620819744,0.657587197282725,0.556094498451196,1.0447564995665,1.23469281844766,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0.393528463494808,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.411618449517138,0,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.571242563048644,0,0.814605311381257,0.387904974335251,0.210407459670956,0.126473074248515,0,0,0,0,0.500535317148282,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0,0,0,0,0,0,0,0.80275294993896,0.820481806145422,0.163934945376675,0,0,0,0,0,0,0,0,0,0,1.60660658210904,2.55492153374884,0.712262414669021,1.14020871547503,0.329940245945071,0,0.971122544619926,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.428674070063185,0.709360934569094,0.713475270408282,0.493647061806363,0.913394847343798,0.23467170806371,0,0,0.8244312647074,0.322928853391811,0.542816324353403,0.716234064018819,0.492422699235184,0,1.11255181206306,0.170870880797853,0.206386867963223,0.185194527369712,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0.609958401380546,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0.777804753376191,1.03327858782185,1.01373675294467,0.704143431874524,0.39061315453185,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.77952493786677,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0.36630324853453,0.428736758158132,0.501572104035363,0.564751842617067,1.84130094602871,1.14579102687879,1.3748254587495,2.74033007908257,1.5107877947794,2.02506750069542,1.80128481289688,0.906284817968409,2.07104124700728,0.31136204275253,1.99512436700516,0.341467211508268,0.486213434136588,0.419226325255965,0,0.222246727801615,0.618105171716683,0,0,0,0,0.37456602987953,0.448176066834085,0.402048282689293,0.476293691283074,0,0.77163688185482,0.412085900803307,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.436039249896986,0.188218760830661,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0,0.118635018124174,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0.749431733813838,0.233931608445408,1.28922632428979,0,0.441182838239031,0 | |||
|short_description=p@chr7:103843314..103843326,+ | |||
}} |
Revision as of 11:08, 14 September 2013
Short description: | p@chr7:103843314..103843326, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:103843314..103843326, + |
Coexpression cluster: | MCL_coexpression_mm9:1474 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.17e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-15 | 23 |
neuron | 7.95e-10 | 33 |
neuronal stem cell | 7.95e-10 | 33 |
neuroblast | 7.95e-10 | 33 |
electrically signaling cell | 7.95e-10 | 33 |
electrically responsive cell | 7.14e-08 | 39 |
electrically active cell | 7.14e-08 | 39 |
striatum neuron | 9.08e-08 | 3 |
neural cell | 7.01e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.