FFCP PHASE1:Mm9::chr7:106728085..106728114,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=39|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:106728085..106728114,+|id=chr7:106728085..106728114,+|ontology_enrichment_celltype=CL:0000117!5.49e-08!23;CL:0000337!5.49e-08!23|ontology_enrichment_celltype_v019_2=CL:0002610,7.42e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0001049!1.97e-19!52;UBERON:0005068!1.97e-19!52;UBERON:0006241!1.97e-19!52;UBERON:0007135!1.97e-19!52;UBERON:0000033!2.74e-19!63;UBERON:0002616!1.17e-18!49;UBERON:0002346!1.23e-16!71;UBERON:0003075!1.23e-16!71;UBERON:0007284!1.23e-16!71;UBERON:0003056!2.31e-16!49;UBERON:0000073!6.28e-16!75;UBERON:0001016!6.28e-16!75;UBERON:0001017!1.73e-15!73;UBERON:0005743!1.73e-15!73;UBERON:0002020!2.24e-14!34;UBERON:0003080!2.68e-14!40;UBERON:0002780!1.47e-13!39;UBERON:0001890!1.47e-13!39;UBERON:0006240!1.47e-13!39;UBERON:0004121!2.03e-13!102;UBERON:0000924!2.03e-13!102;UBERON:0006601!2.03e-13!102;UBERON:0002791!1.72e-12!29;UBERON:0003528!1.72e-12!29;UBERON:0001893!1.72e-12!29;UBERON:0000956!1.20e-10!21;UBERON:0001869!1.20e-10!21;UBERON:0000203!1.20e-10!21;UBERON:0007811!1.07e-09!86;UBERON:0000153!1.92e-09!94;UBERON:0002619!1.95e-08!17;UBERON:0002021!2.67e-08!10;UBERON:0000411!2.67e-08!10;UBERON:0001950!2.67e-08!10;UBERON:0000025!2.93e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.97e-27,54;UBERON:0001016,4.51e-26,75;UBERON:0000955,7.32e-26,47;UBERON:0006238,7.32e-26,47;UBERON:0001017,3.01e-25,73;UBERON:0001049,1.49e-24,52;UBERON:0005068,1.49e-24,52;UBERON:0006241,1.49e-24,52;UBERON:0007135,1.49e-24,52;UBERON:0002616,4.36e-24,46;UBERON:0002021,2.28e-20,10;UBERON:0000411,2.28e-20,10;UBERON:0001950,2.28e-20,10;UBERON:0004121,3.48e-20,95;UBERON:0000924,3.48e-20,95;UBERON:0006601,3.48e-20,95;UBERON:0002346,3.60e-20,64;UBERON:0003075,3.60e-20,64;UBERON:0007284,3.60e-20,64;UBERON:0000956,1.05e-19,21;UBERON:0001869,1.05e-19,21;UBERON:0000203,1.05e-19,21;UBERON:0003528,1.11e-19,29;UBERON:0002791,1.11e-19,29;UBERON:0001893,1.11e-19,29;UBERON:0003080,6.07e-19,40;UBERON:0002619,1.03e-18,17;UBERON:0002020,4.35e-18,34;UBERON:0002780,2.46e-17,39;UBERON:0001890,2.46e-17,39;UBERON:0006240,2.46e-17,39;UBERON:0010371,8.01e-17,73;UBERON:0003056,5.93e-16,49;UBERON:0010314,6.33e-12,92;UBERON:0000025,3.80e-10,114;UBERON:0004111,5.16e-09,122;UBERON:0011216,9.30e-08,194;UBERON:0004684,7.42e-07,3;UBERON:0002275,7.42e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.08004750665353,0.841299845405528,1.42825492201902,0.220868540951614,0.489963196859816,0.479227355091182,1.83843757322004,1.10115880999389,3.57524546638526,3.84016333140609,0.395658863190582,0.182975287204819,0,1.67509799400829,0.56276261003168,1.68078072554491,0.883885756421003,0.569486723196412,0.745597783301202,0.075726193333184,1.20914496170857,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,9.9545470983926,11.51956887474,0,0,0,0,10.3355541189328,2.74500361691176,0.879580464790051,8.51739168942155,5.8814555185976,5.40248915854856,4.38051410282946,0.305518091550949,0.124406970610093,0,0.210441855886474,0.390361328888111,0,0.720248519221397,0.753524089178575,0.748401490664606,0.768682321709099,0.374806898238915,1.03481348295606,0.646703978798527,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0.350296027101508,0,0,0.0810688095458557,0,0.439100230582101,0,1.89260953707715,1.13195073617213,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.80673409849337,0.22237804384487,0.951128130562796,1.42358718463353,0.658795818896044,0.502670417600539,0.198956472041151,0.58489226135736,0,0.432276099749388,0,0.948339504765408,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.379419222745544,0.295220295959204,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,1.89491411770485,1.14075483509418,0.509235257325564,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,3.37156238974363,3.5163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,14.1381379225595,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0,0.493647061806363,0.304464949114599,0.704015124191131,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.2387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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:106728085..106728114,+ | |||
|id=chr7:106728085..106728114,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.49e-08!23;CL:0000337!5.49e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.42e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.84e-19!50;UBERON:0006238!1.84e-19!50;UBERON:0001049!1.97e-19!52;UBERON:0005068!1.97e-19!52;UBERON:0006241!1.97e-19!52;UBERON:0007135!1.97e-19!52;UBERON:0000033!2.74e-19!63;UBERON:0002616!1.17e-18!49;UBERON:0002346!1.23e-16!71;UBERON:0003075!1.23e-16!71;UBERON:0007284!1.23e-16!71;UBERON:0003056!2.31e-16!49;UBERON:0000073!6.28e-16!75;UBERON:0001016!6.28e-16!75;UBERON:0001017!1.73e-15!73;UBERON:0005743!1.73e-15!73;UBERON:0002020!2.24e-14!34;UBERON:0003080!2.68e-14!40;UBERON:0002780!1.47e-13!39;UBERON:0001890!1.47e-13!39;UBERON:0006240!1.47e-13!39;UBERON:0004121!2.03e-13!102;UBERON:0000924!2.03e-13!102;UBERON:0006601!2.03e-13!102;UBERON:0002791!1.72e-12!29;UBERON:0003528!1.72e-12!29;UBERON:0001893!1.72e-12!29;UBERON:0000956!1.20e-10!21;UBERON:0001869!1.20e-10!21;UBERON:0000203!1.20e-10!21;UBERON:0007811!1.07e-09!86;UBERON:0000153!1.92e-09!94;UBERON:0002619!1.95e-08!17;UBERON:0002021!2.67e-08!10;UBERON:0000411!2.67e-08!10;UBERON:0001950!2.67e-08!10;UBERON:0000025!2.93e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.97e-27,54;UBERON:0001016,4.51e-26,75;UBERON:0000955,7.32e-26,47;UBERON:0006238,7.32e-26,47;UBERON:0001017,3.01e-25,73;UBERON:0001049,1.49e-24,52;UBERON:0005068,1.49e-24,52;UBERON:0006241,1.49e-24,52;UBERON:0007135,1.49e-24,52;UBERON:0002616,4.36e-24,46;UBERON:0002021,2.28e-20,10;UBERON:0000411,2.28e-20,10;UBERON:0001950,2.28e-20,10;UBERON:0004121,3.48e-20,95;UBERON:0000924,3.48e-20,95;UBERON:0006601,3.48e-20,95;UBERON:0002346,3.60e-20,64;UBERON:0003075,3.60e-20,64;UBERON:0007284,3.60e-20,64;UBERON:0000956,1.05e-19,21;UBERON:0001869,1.05e-19,21;UBERON:0000203,1.05e-19,21;UBERON:0003528,1.11e-19,29;UBERON:0002791,1.11e-19,29;UBERON:0001893,1.11e-19,29;UBERON:0003080,6.07e-19,40;UBERON:0002619,1.03e-18,17;UBERON:0002020,4.35e-18,34;UBERON:0002780,2.46e-17,39;UBERON:0001890,2.46e-17,39;UBERON:0006240,2.46e-17,39;UBERON:0010371,8.01e-17,73;UBERON:0003056,5.93e-16,49;UBERON:0010314,6.33e-12,92;UBERON:0000025,3.80e-10,114;UBERON:0004111,5.16e-09,122;UBERON:0011216,9.30e-08,194;UBERON:0004684,7.42e-07,3;UBERON:0002275,7.42e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.933206510776299,1.08004750665353,0.841299845405528,1.42825492201902,0.220868540951614,0.489963196859816,0.479227355091182,1.83843757322004,1.10115880999389,3.57524546638526,3.84016333140609,0.395658863190582,0.182975287204819,0,1.67509799400829,0.56276261003168,1.68078072554491,0.883885756421003,0.569486723196412,0.745597783301202,0.075726193333184,1.20914496170857,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,9.9545470983926,11.51956887474,0,0,0,0,10.3355541189328,2.74500361691176,0.879580464790051,8.51739168942155,5.8814555185976,5.40248915854856,4.38051410282946,0.305518091550949,0.124406970610093,0,0.210441855886474,0.390361328888111,0,0.720248519221397,0.753524089178575,0.748401490664606,0.768682321709099,0.374806898238915,1.03481348295606,0.646703978798527,0,0,0,0.278047249225598,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0,0,0,0,0.350296027101508,0,0,0.0810688095458557,0,0.439100230582101,0,1.89260953707715,1.13195073617213,0,0,0.213288250535234,0.696710015581316,0.128867461322093,0.80673409849337,0.22237804384487,0.951128130562796,1.42358718463353,0.658795818896044,0.502670417600539,0.198956472041151,0.58489226135736,0,0.432276099749388,0,0.948339504765408,0.228497025219458,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.379419222745544,0.295220295959204,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0,0,0.482443521363367,0,1.89491411770485,1.14075483509418,0.509235257325564,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,0,0.275936746304732,3.37156238974363,3.5163505977661,0,0.252470927204373,0,0,0,0,0,0,0,0,0,14.1381379225595,0.425820255624806,0.178065603667255,0,0.824850614862677,0,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0,0.493647061806363,0.304464949114599,0.704015124191131,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.238744688006273,0,0,5.19190845629427,0,0.412773735926445,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0.474503990371703,0.203319467126849,0,0,0,0.134864346384821,0,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0.201932899896295,0,0,0,0,0,0,0.443971906748129,0.0897138566094757,0,0,1.87682475451182,0.549454872801795,0,0,1.6942555278512,1.84130094602871,1.14579102687879,1.54667864109319,5.48066015816514,5.2877572817279,2.02506750069542,5.40385443869065,8.15656336171568,6.21312374102184,0.93408612825759,0.798049746802062,0.853668028770671,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0,0,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.197008964751127,0,0,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p@chr7:106728085..106728114,+ | |||
}} |
Revision as of 11:13, 14 September 2013
Short description: | p@chr7:106728085..106728114, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:106728085..106728114, + |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.42e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.