FFCP PHASE1:Mm9::chr7:74367460..74367521,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75099|HGNC=|MCL_coexpression_id=60|UniProt=Q8CC84|association_with_transcript=0bp_to_ENSMUST00000058771,NM_001191051,uc009hic.2,uc009hid.2_5end|description=CAGE_peak_1_at_Lysmd4_5end|id=chr7:74367460..74367521,+|ontology_enrichment_celltype=CL:0000117!1.18e-13!23;CL:0000337!1.18e-13!23;CL:0000540!6.35e-08!33;CL:0000047!6.35e-08!33;CL:0000031!6.35e-08!33;CL:0000404!6.35e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-13,23;CL:0000337,1.17e-13,23;CL:0000540,6.34e-08,33;CL:0000047,6.34e-08,33;CL:0000031,6.34e-08,33;CL:0000404,6.34e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.46e-20!52;UBERON:0005068!1.46e-20!52;UBERON:0006241!1.46e-20!52;UBERON:0007135!1.46e-20!52;UBERON:0000955!7.65e-20!50;UBERON:0006238!7.65e-20!50;UBERON:0002616!3.21e-19!49;UBERON:0001017!4.97e-19!73;UBERON:0005743!4.97e-19!73;UBERON:0000033!1.37e-18!63;UBERON:0000073!1.20e-17!75;UBERON:0001016!1.20e-17!75;UBERON:0002020!1.91e-17!34;UBERON:0003080!1.67e-16!40;UBERON:0002346!3.27e-16!71;UBERON:0003075!3.27e-16!71;UBERON:0007284!3.27e-16!71;UBERON:0003056!5.46e-16!49;UBERON:0002780!5.85e-16!39;UBERON:0001890!5.85e-16!39;UBERON:0006240!5.85e-16!39;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0002791!1.32e-14!29;UBERON:0003528!1.32e-14!29;UBERON:0001893!1.32e-14!29;UBERON:0000956!3.53e-10!21;UBERON:0001869!3.53e-10!21;UBERON:0000203!3.53e-10!21;UBERON:0000025!7.53e-10!114;UBERON:0004111!1.61e-09!122;UBERON:0002619!2.76e-08!17;UBERON:0002021!6.70e-07!10;UBERON:0000411!6.70e-07!10;UBERON:0001950!6.70e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-22,54;UBERON:0001049,1.51e-20,52;UBERON:0005068,1.51e-20,52;UBERON:0006241,1.51e-20,52;UBERON:0007135,1.51e-20,52;UBERON:0001017,5.12e-19,73;UBERON:0002346,1.12e-18,64;UBERON:0003075,1.12e-18,64;UBERON:0007284,1.12e-18,64;UBERON:0010314,7.49e-18,92;UBERON:0000955,9.14e-18,47;UBERON:0006238,9.14e-18,47;UBERON:0001016,1.23e-17,75;UBERON:0002020,1.91e-17,34;UBERON:0002616,3.69e-17,46;UBERON:0010371,6.44e-17,73;UBERON:0003080,1.67e-16,40;UBERON:0004121,2.58e-16,95;UBERON:0000924,2.58e-16,95;UBERON:0006601,2.58e-16,95;UBERON:0003056,5.45e-16,49;UBERON:0002780,5.84e-16,39;UBERON:0001890,5.84e-16,39;UBERON:0006240,5.84e-16,39;UBERON:0003528,1.32e-14,29;UBERON:0002791,1.32e-14,29;UBERON:0001893,1.32e-14,29;UBERON:0000956,3.53e-10,21;UBERON:0001869,3.53e-10,21;UBERON:0000203,3.53e-10,21;UBERON:0000025,7.66e-10,114;UBERON:0004111,1.63e-09,122;UBERON:0002619,2.75e-08,17;UBERON:0002021,6.69e-07,10;UBERON:0000411,6.69e-07,10;UBERON:0001950,6.69e-07,10|phase1_expression=6.56610273129655,9.42233600626275,11.3749809847384,16.6355316218757,15.0268718983904,3.52546471014969,5.37309073369709,1.29123323441576,0.140788722151667,0.234064526321993,1.71217968225505,1.7549874978974,2.9104124088305,1.39872643870396,0.999329285446988,1.21485160433896,1.39912375625629,2.05050407482854,3.42786084014347,1.69755860719212,6.54833334163237,0,0,4.31979541542198,4.12936705920906,8.6134794617253,6.03066794622705,7.75696437669201,7.60093677825496,6.80481350351813,6.43018480900384,3.17515336729816,2.46025915033828,0,1.1554064790051,2.32728503501889,1.22501613757421,1.25559489221072,1.5626706890476,2.09409497589519,0.588231488031014,2.04913645487534,1.45653105909346,4.40638862914521,3.04130793658544,2.9367480345869,0.782391344348039,4.57852828398938,3.95435128922049,4.86074747685709,5.17949760013841,2.87505128729943,1.17447824240415,3.62681071005672,1.68046899571232,2.82985379639542,5.44413535883638,6.18806510732931,10.5204559646991,12.6957835025288,13.9442908771359,2.71075625655306,4.4464739805557,1.7997994345628,4.94433181283487,3.5524005747305,5.39280198933128,4.99483796918021,10.5763404554647,9.99043943654511,11.567872874326,14.568200204594,13.9147180799517,9.30930074033651,9.68039257284187,11.0306254393203,18.7196997698961,17.2377906415003,14.2854075928306,11.3422207447967,13.3571959659518,10.4182674111352,23.1721889171146,23.0732670112989,16.0438160165651,12.6690291753677,12.1015928679237,11.183966749518,2.65041676666144,2.56943304363071,5.2175607966302,4.30211938490693,2.719885334831,2.69851595818909,1.94932925234301,4.92829575807069,4.49422144421606,2.72688516124892,1.81850203222008,3.18005617059306,4.50698943285378,5.13305909657271,5.09610479413291,0,1.94841936910093,2.02687892380079,1.01104889002957,4.79572294820052,2.58937883647172,2.52351636410202,4.8575891494518,4.87144765299426,4.61230994512117,3.61734337326294,3.64524992120685,3.51866455723091,8.15743393523434,4.04878199375753,7.07688441559899,5.66183974815932,3.97514733228708,3.87900202508178,1.86391761218122,13.1751358655196,12.7762491156208,7.66371165625774,0.838705871541442,0,1.27070227073065,12.5824137100051,10.0650132620098,10.5549655774806,13.3844726548053,16.6215047264715,13.5062228963714,14.9261962022337,5.49932564791708,4.35424397135326,5.55990068554084,3.36706969418358,3.77349284591841,3.44853156650209,5.221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| ||
|EntrezGene=75099 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q8CC84 | |||
|association_with_transcript=0bp_to_ENSMUST00000058771,NM_001191051,uc009hic.2,uc009hid.2_5end | |||
|description=CAGE_peak_1_at_Lysmd4_5end | |||
|id=chr7:74367460..74367521,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.18e-13!23;CL:0000337!1.18e-13!23;CL:0000540!6.35e-08!33;CL:0000047!6.35e-08!33;CL:0000031!6.35e-08!33;CL:0000404!6.35e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.17e-13,23;CL:0000337,1.17e-13,23;CL:0000540,6.34e-08,33;CL:0000047,6.34e-08,33;CL:0000031,6.34e-08,33;CL:0000404,6.34e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.46e-20!52;UBERON:0005068!1.46e-20!52;UBERON:0006241!1.46e-20!52;UBERON:0007135!1.46e-20!52;UBERON:0000955!7.65e-20!50;UBERON:0006238!7.65e-20!50;UBERON:0002616!3.21e-19!49;UBERON:0001017!4.97e-19!73;UBERON:0005743!4.97e-19!73;UBERON:0000033!1.37e-18!63;UBERON:0000073!1.20e-17!75;UBERON:0001016!1.20e-17!75;UBERON:0002020!1.91e-17!34;UBERON:0003080!1.67e-16!40;UBERON:0002346!3.27e-16!71;UBERON:0003075!3.27e-16!71;UBERON:0007284!3.27e-16!71;UBERON:0003056!5.46e-16!49;UBERON:0002780!5.85e-16!39;UBERON:0001890!5.85e-16!39;UBERON:0006240!5.85e-16!39;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0002791!1.32e-14!29;UBERON:0003528!1.32e-14!29;UBERON:0001893!1.32e-14!29;UBERON:0000956!3.53e-10!21;UBERON:0001869!3.53e-10!21;UBERON:0000203!3.53e-10!21;UBERON:0000025!7.53e-10!114;UBERON:0004111!1.61e-09!122;UBERON:0002619!2.76e-08!17;UBERON:0002021!6.70e-07!10;UBERON:0000411!6.70e-07!10;UBERON:0001950!6.70e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-22,54;UBERON:0001049,1.51e-20,52;UBERON:0005068,1.51e-20,52;UBERON:0006241,1.51e-20,52;UBERON:0007135,1.51e-20,52;UBERON:0001017,5.12e-19,73;UBERON:0002346,1.12e-18,64;UBERON:0003075,1.12e-18,64;UBERON:0007284,1.12e-18,64;UBERON:0010314,7.49e-18,92;UBERON:0000955,9.14e-18,47;UBERON:0006238,9.14e-18,47;UBERON:0001016,1.23e-17,75;UBERON:0002020,1.91e-17,34;UBERON:0002616,3.69e-17,46;UBERON:0010371,6.44e-17,73;UBERON:0003080,1.67e-16,40;UBERON:0004121,2.58e-16,95;UBERON:0000924,2.58e-16,95;UBERON:0006601,2.58e-16,95;UBERON:0003056,5.45e-16,49;UBERON:0002780,5.84e-16,39;UBERON:0001890,5.84e-16,39;UBERON:0006240,5.84e-16,39;UBERON:0003528,1.32e-14,29;UBERON:0002791,1.32e-14,29;UBERON:0001893,1.32e-14,29;UBERON:0000956,3.53e-10,21;UBERON:0001869,3.53e-10,21;UBERON:0000203,3.53e-10,21;UBERON:0000025,7.66e-10,114;UBERON:0004111,1.63e-09,122;UBERON:0002619,2.75e-08,17;UBERON:0002021,6.69e-07,10;UBERON:0000411,6.69e-07,10;UBERON:0001950,6.69e-07,10 | |||
|phase1_expression=6.56610273129655,9.42233600626275,11.3749809847384,16.6355316218757,15.0268718983904,3.52546471014969,5.37309073369709,1.29123323441576,0.140788722151667,0.234064526321993,1.71217968225505,1.7549874978974,2.9104124088305,1.39872643870396,0.999329285446988,1.21485160433896,1.39912375625629,2.05050407482854,3.42786084014347,1.69755860719212,6.54833334163237,0,0,4.31979541542198,4.12936705920906,8.6134794617253,6.03066794622705,7.75696437669201,7.60093677825496,6.80481350351813,6.43018480900384,3.17515336729816,2.46025915033828,0,1.1554064790051,2.32728503501889,1.22501613757421,1.25559489221072,1.5626706890476,2.09409497589519,0.588231488031014,2.04913645487534,1.45653105909346,4.40638862914521,3.04130793658544,2.9367480345869,0.782391344348039,4.57852828398938,3.95435128922049,4.86074747685709,5.17949760013841,2.87505128729943,1.17447824240415,3.62681071005672,1.68046899571232,2.82985379639542,5.44413535883638,6.18806510732931,10.5204559646991,12.6957835025288,13.9442908771359,2.71075625655306,4.4464739805557,1.7997994345628,4.94433181283487,3.5524005747305,5.39280198933128,4.99483796918021,10.5763404554647,9.99043943654511,11.567872874326,14.568200204594,13.9147180799517,9.30930074033651,9.68039257284187,11.0306254393203,18.7196997698961,17.2377906415003,14.2854075928306,11.3422207447967,13.3571959659518,10.4182674111352,23.1721889171146,23.0732670112989,16.0438160165651,12.6690291753677,12.1015928679237,11.183966749518,2.65041676666144,2.56943304363071,5.2175607966302,4.30211938490693,2.719885334831,2.69851595818909,1.94932925234301,4.92829575807069,4.49422144421606,2.72688516124892,1.81850203222008,3.18005617059306,4.50698943285378,5.13305909657271,5.09610479413291,0,1.94841936910093,2.02687892380079,1.01104889002957,4.79572294820052,2.58937883647172,2.52351636410202,4.8575891494518,4.87144765299426,4.61230994512117,3.61734337326294,3.64524992120685,3.51866455723091,8.15743393523434,4.04878199375753,7.07688441559899,5.66183974815932,3.97514733228708,3.87900202508178,1.86391761218122,13.1751358655196,12.7762491156208,7.66371165625774,0.838705871541442,0,1.27070227073065,12.5824137100051,10.0650132620098,10.5549655774806,13.3844726548053,16.6215047264715,13.5062228963714,14.9261962022337,5.49932564791708,4.35424397135326,5.55990068554084,3.36706969418358,3.77349284591841,3.44853156650209,5.22180176435513,6.32960234910003,7.34794190834341,7.81493693737584,7.58983968933804,5.95017752699736,4.095791865724,5.67318240503458,6.862093842394,5.04150184583422,5.00485048606076,2.78601733217733,3.90986059175093,5.37392520409932,0.702213187313235,1.28673953557358,0.852490498186778,3.72826390563903,2.81431271977315,5.58192390529146,3.78791576936336,7.67380503814875,4.62801338662135,7.20855228726264,6.43856163359086,6.42209383019432,6.58239399653922,6.23836363500562,8.10688095458557,7.45619935869195,5.92785311285837,8.05238512562231,14.930586348053,12.7601719350313,12.2254949704005,4.49565963328025,3.62590025909898,5.34144345279009,3.60828891701861,3.42861991859682,2.66853652613844,4.1849637744763,7.11793592316767,4.44687177754829,6.03204501120647,4.17808591286417,3.70431765526328,4.49409704327111,5.18731319699266,6.57166201739412,5.50036912763937,5.1411830674378,5.63538678365402,3.86937522906097,6.40043207653165,4.20814919341911,6.13394410105296,5.31396532726568,6.43694784149637,5.79966670432462,4.44678940630723,1.50160595144485,1.57247196090562,1.79889689907883,1.82574109249653,2.17059443777175,1.78238096246994,3.16465751195892,4.70192157647603,3.0201755450689,7.18841032636773,4.09355042435354,4.68056509671841,3.78868316920668,4.84373016509163,7.71909634181387,2.77129785249907,4.16881105895066,4.07412441105065,3.56464680127895,5.16318546234705,5.69521275302174,3.57065461329021,3.31727201358258,3.78324345854858,3.5434350343804,6.05928120898451,3.93271955317771,3.45369963731791,3.47157740595628,3.01582567878545,0,4.42587845717133,2.20749397043786,12.0412942490844,11.8383803458125,5.08198330667694,5.80683132570058,4.10160685241134,1.95219372148319,4.52389135238878,1.91175038362042,5.12436950389506,3.11384183867716,1.61924280669958,4.09158201075837,2.76701444562566,13.4954952897159,4.5420827266646,5.52003371368491,7.32991317091092,3.62934270539578,1.32745138339963,2.91336763385978,4.53485335447127,4.33791683438566,1.18120757152309,4.30409207121498,3.6179961043551,3.63533729477506,3.20847640546249,6.95280867458795,9.48767477174989,2.06271086496374,4.42571487479924,4.14140516272013,6.72665155670323,5.78709994585299,5.67488747655275,6.24290861607247,7.56925494769756,6.39376393140658,2.11204537257339,6.99045833850607,3.30792597082443,5.11147384118588,3.55221738730992,4.88534691918062,4.41677672811605,4.92422699235184,7.57850175237612,10.3838169125885,3.2465467351592,4.95328483111734,2.96311243791539,1.50694765603753,1.6403307326523,1.37266903923914,2.88963330989554,2.51912614182584,1.65839968565309,3.81868247206045,4.11236791655476,5.28630614529807,4.21220829205025,5.85447228840512,5.02233896616208,4.9899808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| |||
|short_description=p1@Lysmd4 | |||
}} |
Revision as of 14:06, 14 September 2013
Short description: | p1@Lysmd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lysmd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000058771, NM_001191051, uc009hic.2, uc009hid.2_5end |
EntrezGene: | Lysmd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.17e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-13 | 23 |
neuron | 6.34e-08 | 33 |
neuronal stem cell | 6.34e-08 | 33 |
neuroblast | 6.34e-08 | 33 |
electrically signaling cell | 6.34e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.