FFCP PHASE1:Mm9::chr8:89996442..89996470,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12404|HGNC=|MCL_coexpression_id=30|UniProt=Q7TNF5,Q9R171|association_with_transcript=20bp_to_NM_019626,uc009mqr.1_5end|description=CAGE_peak_1_at_Cbln1_5end|id=chr8:89996442..89996470,-|ontology_enrichment_celltype=CL:0000117!1.54e-13!23;CL:0000337!1.54e-13!23;CL:0000540!1.01e-07!33;CL:0000047!1.01e-07!33;CL:0000031!1.01e-07!33;CL:0000404!1.01e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.78e-18,23;CL:0000337,7.78e-18,23;CL:0000540,1.11e-10,33;CL:0000047,1.11e-10,33;CL:0000031,1.11e-10,33;CL:0000404,1.11e-10,33;CL:0000393,8.14e-08,39;CL:0000211,8.14e-08,39;CL:0000221,3.33e-07,44;CL:0000133,3.33e-07,44;CL:0002319,5.72e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.64e-20!52;UBERON:0005068!7.64e-20!52;UBERON:0006241!7.64e-20!52;UBERON:0007135!7.64e-20!52;UBERON:0002346!3.34e-19!71;UBERON:0003075!3.34e-19!71;UBERON:0007284!3.34e-19!71;UBERON:0000033!8.07e-19!63;UBERON:0000955!1.95e-18!50;UBERON:0006238!1.95e-18!50;UBERON:0001017!5.30e-18!73;UBERON:0005743!5.30e-18!73;UBERON:0002616!7.37e-18!49;UBERON:0000073!1.44e-17!75;UBERON:0001016!1.44e-17!75;UBERON:0004121!3.94e-16!102;UBERON:0000924!3.94e-16!102;UBERON:0006601!3.94e-16!102;UBERON:0003056!1.30e-15!49;UBERON:0003080!2.97e-14!40;UBERON:0002780!9.44e-14!39;UBERON:0001890!9.44e-14!39;UBERON:0006240!9.44e-14!39;UBERON:0002020!2.07e-11!34;UBERON:0000153!3.08e-09!94;UBERON:0007811!1.33e-08!86;UBERON:0002791!2.05e-08!29;UBERON:0003528!2.05e-08!29;UBERON:0001893!2.05e-08!29;UBERON:0001894!6.05e-07!10;UBERON:0006222!6.05e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-25,54;UBERON:0001049,2.91e-23,52;UBERON:0005068,2.91e-23,52;UBERON:0006241,2.91e-23,52;UBERON:0007135,2.91e-23,52;UBERON:0002346,7.88e-23,64;UBERON:0003075,7.88e-23,64;UBERON:0007284,7.88e-23,64;UBERON:0001017,6.11e-22,73;UBERON:0001016,7.50e-21,75;UBERON:0010371,1.85e-19,73;UBERON:0000955,7.66e-19,47;UBERON:0006238,7.66e-19,47;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002616,4.14e-18,46;UBERON:0003056,1.43e-17,49;UBERON:0003080,4.29e-16,40;UBERON:0002780,1.94e-15,39;UBERON:0001890,1.94e-15,39;UBERON:0006240,1.94e-15,39;UBERON:0010314,2.64e-13,92;UBERON:0002020,2.15e-12,34;UBERON:0001894,6.98e-09,10;UBERON:0006222,6.98e-09,10;UBERON:0003528,1.30e-08,29;UBERON:0002791,1.30e-08,29;UBERON:0001893,1.30e-08,29;UBERON:0002420,4.55e-08,8;UBERON:0007245,4.55e-08,8;UBERON:0010009,4.55e-08,8;UBERON:0010011,4.55e-08,8;UBERON:0000454,4.55e-08,8;UBERON:0003076,6.34e-08,12;UBERON:0003057,6.34e-08,12;UBERON:0000007,1.76e-07,8;UBERON:0003296,1.76e-07,8;UBERON:0010133,1.76e-07,8|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,9.26971862646661,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,24.2779753031517,23.2756030879694,13.9442908771359,0,0,0,0.988866362566974,0,0.599200221036809,0,1.14058573539325,1.08004750665353,1.05162480675691,29.9933533623994,31.3633328151291,4.16468717330844,2.01275489138296,2.75765635983006,26.4278114398533,21.068410784056,25.0378649207677,32.9715719325485,38.2418350258072,31.7757156039624,34.3395088771699,25.3243174514256,17.4190002465564,24.7488011797881,20.5015220350708,27.2143190904939,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,1.40444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,1.82694207550496,0,0,0.693941307064543,1.21786191324856,0.691846491768175,0.452167921657868,4.58595957829249,0.251333182659351,0,0,0,0.161766849947409,0.883366073841574,0,0,249.156458256827,372.605691421137,0,0,0,0,6.74057877321702,5.94750783664214,3.14135880282161,2.60736480288415,5.62574006126727,15.9996794310861,8.59878694259116,0.305518091550949,0,0.758168275301024,0.631325567659422,1.56144531555244,0,1.0803727788321,1.65775299619287,1.2246569847239,2.94661556655154,5.528401749024,3.10444044886819,8.62271971731369,3.9712276835242,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,16.3208098791164,0,0,0,0.207125772535502,0.703578179943289,0,0,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.243206428637567,0.292399974850665,0.658650345873152,0.268412837520744,1.05144974282064,3.91037527041281,0,0.264450566663544,0.639864751605702,1.16118335930219,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0,0,0,0,0,0.315270288212382,0,0.318909537314974,0,0,0,0,0,0,0,15.412856638828,16.6440594960929,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,12.5315313404505,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,4.08527526904546,20.1668425315067,25.4836607052026,17.7899739076222,19.5074257006501,14.9829806785739,10.5311373185357,9.74287837166718,0.704015124191131,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,11.4963687246516,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,2.25477175473676,55.0220889441842,48.4793377039296,35.1956650902726,44.8184587467727,53.5590917805767,88.72207241619,18.7494314175288,0.943734099831398,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,1.71494703263253,0,2.82375921308533,2.76195141904306,2.29158205375759,0.68741272937475,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,3.63255716544618,7.18244772121856,4.95127456686989,1.45864030240976,2.30574478890781,2.38996560985018,1.77797382241292,2.67845574410562,3.20919209591815,1.51618327058278,2.5347929989024,2.82939512079114,3.46473577638565,2.24088033417042,3.10151532360312,2.85776214769844,2.54945517078682,2.31491064556446,1.64834360321323,2.06078488188156,3.08582327146874,1.4198064492747,2.86123427936785,1.74415699958794,2.72917203204459,2.5384382367503,1.82927972872773,1.31534855718921,2.71608227691724,2.24456908663095,2.25406534435931,3.25064791839359,0.818462086339379,2.47898945897546,3.2794123866794,8.74337022782811,2.8071793013449,3.22306581072447,0.956441660344217,0.661774257358546,0.463735671240843|short_description=p1@Cbln1}} | ||
|EntrezGene=12404 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q7TNF5,Q9R171 | |||
|association_with_transcript=20bp_to_NM_019626,uc009mqr.1_5end | |||
|description=CAGE_peak_1_at_Cbln1_5end | |||
|id=chr8:89996442..89996470,- | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-13!23;CL:0000337!1.54e-13!23;CL:0000540!1.01e-07!33;CL:0000047!1.01e-07!33;CL:0000031!1.01e-07!33;CL:0000404!1.01e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.78e-18,23;CL:0000337,7.78e-18,23;CL:0000540,1.11e-10,33;CL:0000047,1.11e-10,33;CL:0000031,1.11e-10,33;CL:0000404,1.11e-10,33;CL:0000393,8.14e-08,39;CL:0000211,8.14e-08,39;CL:0000221,3.33e-07,44;CL:0000133,3.33e-07,44;CL:0002319,5.72e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.64e-20!52;UBERON:0005068!7.64e-20!52;UBERON:0006241!7.64e-20!52;UBERON:0007135!7.64e-20!52;UBERON:0002346!3.34e-19!71;UBERON:0003075!3.34e-19!71;UBERON:0007284!3.34e-19!71;UBERON:0000033!8.07e-19!63;UBERON:0000955!1.95e-18!50;UBERON:0006238!1.95e-18!50;UBERON:0001017!5.30e-18!73;UBERON:0005743!5.30e-18!73;UBERON:0002616!7.37e-18!49;UBERON:0000073!1.44e-17!75;UBERON:0001016!1.44e-17!75;UBERON:0004121!3.94e-16!102;UBERON:0000924!3.94e-16!102;UBERON:0006601!3.94e-16!102;UBERON:0003056!1.30e-15!49;UBERON:0003080!2.97e-14!40;UBERON:0002780!9.44e-14!39;UBERON:0001890!9.44e-14!39;UBERON:0006240!9.44e-14!39;UBERON:0002020!2.07e-11!34;UBERON:0000153!3.08e-09!94;UBERON:0007811!1.33e-08!86;UBERON:0002791!2.05e-08!29;UBERON:0003528!2.05e-08!29;UBERON:0001893!2.05e-08!29;UBERON:0001894!6.05e-07!10;UBERON:0006222!6.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-25,54;UBERON:0001049,2.91e-23,52;UBERON:0005068,2.91e-23,52;UBERON:0006241,2.91e-23,52;UBERON:0007135,2.91e-23,52;UBERON:0002346,7.88e-23,64;UBERON:0003075,7.88e-23,64;UBERON:0007284,7.88e-23,64;UBERON:0001017,6.11e-22,73;UBERON:0001016,7.50e-21,75;UBERON:0010371,1.85e-19,73;UBERON:0000955,7.66e-19,47;UBERON:0006238,7.66e-19,47;UBERON:0004121,1.27e-18,95;UBERON:0000924,1.27e-18,95;UBERON:0006601,1.27e-18,95;UBERON:0002616,4.14e-18,46;UBERON:0003056,1.43e-17,49;UBERON:0003080,4.29e-16,40;UBERON:0002780,1.94e-15,39;UBERON:0001890,1.94e-15,39;UBERON:0006240,1.94e-15,39;UBERON:0010314,2.64e-13,92;UBERON:0002020,2.15e-12,34;UBERON:0001894,6.98e-09,10;UBERON:0006222,6.98e-09,10;UBERON:0003528,1.30e-08,29;UBERON:0002791,1.30e-08,29;UBERON:0001893,1.30e-08,29;UBERON:0002420,4.55e-08,8;UBERON:0007245,4.55e-08,8;UBERON:0010009,4.55e-08,8;UBERON:0010011,4.55e-08,8;UBERON:0000454,4.55e-08,8;UBERON:0003076,6.34e-08,12;UBERON:0003057,6.34e-08,12;UBERON:0000007,1.76e-07,8;UBERON:0003296,1.76e-07,8;UBERON:0010133,1.76e-07,8 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,9.26971862646661,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0.515672092277442,24.2779753031517,23.2756030879694,13.9442908771359,0,0,0,0.988866362566974,0,0.599200221036809,0,1.14058573539325,1.08004750665353,1.05162480675691,29.9933533623994,31.3633328151291,4.16468717330844,2.01275489138296,2.75765635983006,26.4278114398533,21.068410784056,25.0378649207677,32.9715719325485,38.2418350258072,31.7757156039624,34.3395088771699,25.3243174514256,17.4190002465564,24.7488011797881,20.5015220350708,27.2143190904939,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,1.40444420131752,0,0,0,1.40843419776681,0,0,0,0,0,0,1.82694207550496,0,0,0.693941307064543,1.21786191324856,0.691846491768175,0.452167921657868,4.58595957829249,0.251333182659351,0,0,0,0.161766849947409,0.883366073841574,0,0,249.156458256827,372.605691421137,0,0,0,0,6.74057877321702,5.94750783664214,3.14135880282161,2.60736480288415,5.62574006126727,15.9996794310861,8.59878694259116,0.305518091550949,0,0.758168275301024,0.631325567659422,1.56144531555244,0,1.0803727788321,1.65775299619287,1.2246569847239,2.94661556655154,5.528401749024,3.10444044886819,8.62271971731369,3.9712276835242,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,16.3208098791164,0,0,0,0.207125772535502,0.703578179943289,0,0,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0.243206428637567,0.292399974850665,0.658650345873152,0.268412837520744,1.05144974282064,3.91037527041281,0,0.264450566663544,0.639864751605702,1.16118335930219,0.257734922644187,0.201683524623343,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0,0.126473074248515,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0,0,0,0,0,0.315270288212382,0,0.318909537314974,0,0,0,0,0,0,0,15.412856638828,16.6440594960929,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,12.5315313404505,0,0.35613120733451,0.488660878060728,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,4.08527526904546,20.1668425315067,25.4836607052026,17.7899739076222,19.5074257006501,14.9829806785739,10.5311373185357,9.74287837166718,0.704015124191131,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,11.4963687246516,0,0,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,2.25477175473676,55.0220889441842,48.4793377039296,35.1956650902726,44.8184587467727,53.5590917805767,88.72207241619,18.7494314175288,0.943734099831398,0,0.576060012515731,0,0.202725215290164,0.308132871494482,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,1.71494703263253,0,2.82375921308533,2.76195141904306,2.29158205375759,0.68741272937475,0.685082519770642,0.755393897389701,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,3.63255716544618,7.18244772121856,4.95127456686989,1.45864030240976,2.30574478890781,2.38996560985018,1.77797382241292,2.67845574410562,3.20919209591815,1.51618327058278,2.5347929989024,2.82939512079114,3.46473577638565,2.24088033417042,3.10151532360312,2.85776214769844,2.54945517078682,2.31491064556446,1.64834360321323,2.06078488188156,3.08582327146874,1.4198064492747,2.86123427936785,1.74415699958794,2.72917203204459,2.5384382367503,1.82927972872773,1.31534855718921,2.71608227691724,2.24456908663095,2.25406534435931,3.25064791839359,0.818462086339379,2.47898945897546,3.2794123866794,8.74337022782811,2.8071793013449,3.22306581072447,0.956441660344217,0.661774257358546,0.463735671240843 | |||
|short_description=p1@Cbln1 | |||
}} |
Revision as of 16:23, 14 September 2013
Short description: | p1@Cbln1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cbln1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 20bp_to_NM_019626, uc009mqr.1_5end |
EntrezGene: | Cbln1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.78e-18 | 23 |
neuroblast (sensu Vertebrata) | 7.78e-18 | 23 |
neuron | 1.11e-10 | 33 |
neuronal stem cell | 1.11e-10 | 33 |
neuroblast | 1.11e-10 | 33 |
electrically signaling cell | 1.11e-10 | 33 |
electrically responsive cell | 8.14e-08 | 39 |
electrically active cell | 8.14e-08 | 39 |
ectodermal cell | 3.33e-07 | 44 |
neurectodermal cell | 3.33e-07 | 44 |
neural cell | 5.72e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.