FFCP PHASE1:Mm9::chrX:69062111..69062152,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67048|HGNC=|UniProt=Q78T54,F2Z447|association_with_transcript=0bp_to_ENSMUST00000101496,ENSMUST00000114575,ENSMUST00000138979,ENSMUST00000154054,NM_001081356,uc009tkf.2_5end|description=CAGE_peak_1_at_Vma21_5end|id=chrX:69062111..69062152,+|ontology_enrichment_celltype=CL:0000055!2.85e-10!50;CL:0000221!6.17e-08!44;CL:0000133!6.17e-08!44;CL:0002319!1.51e-07!43;CL:0000393!3.75e-07!39;CL:0000211!3.75e-07!39|ontology_enrichment_celltype_v019_2=CL:0000221,6.17e-08,44;CL:0000133,6.17e-08,44;CL:0002319,1.51e-07,43;CL:0000393,3.75e-07,39;CL:0000211,3.75e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.18e-22!102;UBERON:0000924!1.18e-22!102;UBERON:0006601!1.18e-22!102;UBERON:0000073!1.85e-18!75;UBERON:0001016!1.85e-18!75;UBERON:0001017!1.40e-17!73;UBERON:0005743!1.40e-17!73;UBERON:0002346!2.70e-17!71;UBERON:0003075!2.70e-17!71;UBERON:0007284!2.70e-17!71;UBERON:0000033!4.37e-16!63;UBERON:0004111!5.92e-16!122;UBERON:0000025!5.91e-15!114;UBERON:0000955!6.27e-14!50;UBERON:0006238!6.27e-14!50;UBERON:0001049!7.53e-14!52;UBERON:0005068!7.53e-14!52;UBERON:0006241!7.53e-14!52;UBERON:0007135!7.53e-14!52;UBERON:0002616!2.53e-13!49;UBERON:0002020!1.28e-10!34;UBERON:0003056!2.86e-10!49;UBERON:0000119!1.51e-09!183;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0000483!7.46e-09!181;UBERON:0003080!9.88e-09!40;UBERON:0000475!1.91e-08!200;UBERON:0002780!3.20e-08!39;UBERON:0001890!3.20e-08!39;UBERON:0006240!3.20e-08!39;UBERON:0002619!2.45e-07!17;UBERON:0000956!2.76e-07!21;UBERON:0001869!2.76e-07!21;UBERON:0000203!2.76e-07!21;UBERON:0002021!3.98e-07!10;UBERON:0000411!3.98e-07!10;UBERON:0001950!3.98e-07!10;UBERON:0000477!4.42e-07!154;UBERON:0007811!6.44e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.82e-21,95;UBERON:0000924,9.82e-21,95;UBERON:0006601,9.82e-21,95;UBERON:0010314,4.60e-20,92;UBERON:0001016,1.85e-18,75;UBERON:0001017,1.40e-17,73;UBERON:0010371,6.15e-17,73;UBERON:0004111,5.92e-16,122;UBERON:0002346,1.12e-15,64;UBERON:0003075,1.12e-15,64;UBERON:0007284,1.12e-15,64;UBERON:0000025,5.91e-15,114;UBERON:0000073,5.99e-15,54;UBERON:0001049,7.53e-14,52;UBERON:0005068,7.53e-14,52;UBERON:0006241,7.53e-14,52;UBERON:0007135,7.53e-14,52;UBERON:0000955,3.18e-12,47;UBERON:0006238,3.18e-12,47;UBERON:0002616,1.22e-11,46;UBERON:0002020,1.28e-10,34;UBERON:0003056,2.86e-10,49;UBERON:0003528,4.02e-09,29;UBERON:0002791,4.02e-09,29;UBERON:0001893,4.02e-09,29;UBERON:0003080,9.88e-09,40;UBERON:0002780,3.20e-08,39;UBERON:0001890,3.20e-08,39;UBERON:0006240,3.20e-08,39;UBERON:0000119,4.39e-08,176;UBERON:0000483,1.86e-07,174;UBERON:0002619,2.45e-07,17;UBERON:0000956,2.76e-07,21;UBERON:0001869,2.76e-07,21;UBERON:0000203,2.76e-07,21;UBERON:0002021,3.98e-07,10;UBERON:0000411,3.98e-07,10;UBERON:0001950,3.98e-07,10|phase1_expression=28.1861970904437,9.42233600626275,8.18998630901165,5.14189159221611,5.50985302940982,12.0873075776561,15.8856595604957,13.4288256379239,6.47628121897667,7.95819389494778,22.6007718057667,20.8205334977828,15.7504671536709,15.4734112281625,18.9872564234928,14.9831697868471,12.5921138063066,16.4040325986284,18.7846774039862,15.2780274647291,19.8150866051993,22.539045922601,21.1571829202538,21.4389846543165,15.3704218315004,14.9300310669905,15.0766698655676,14.6520438226405,18.2422482678119,18.9022597319948,25.9424697466706,10.1604907753541,7.99584223859941,31.6963362030877,12.4206196493048,17.2884031172832,10.6168065256432,15.9042019680025,29.6907430919044,25.6526634547161,15.2940186888064,19.8083190637949,18.4493934151838,43.0567117476474,40.6521494190253,35.9751634236896,49.2906546939265,32.9217986134474,30.5363794000916,36.9416808241138,28.2772571683232,35.9381410912429,20.3016953329861,19.5847778343063,17.8129713545506,49.3938117189018,35.2436131124671,41.7694394744728,30.1451526680801,28.0365219014177,26.6209189472595,43.710944636918,38.239676232779,48.1446348745548,53.3987835786166,44.7602472416043,29.0612107202853,24.5899715405795,24.5744381171092,19.9808788730902,25.86997024622,27.7081454871689,30.9215957332259,29.1528102131591,18.9774032616108,21.1420320920305,71.5753226496027,46.7335657391787,52.0726147738665,24.7946220932764,27.0803425063133,21.3574481928272,42.9941818462127,43.3327209724394,42.0195181386228,36.8285731842085,38.5827254965569,35.7886935984577,36.6514775732611,38.0880662938199,18.2614627882057,40.4399222181252,23.1190253460635,38.318926606285,56.5305483179472,45.6987424839282,23.4542181620026,35.6199374188141,30.6547485431385,43.1074280902615,42.3938693527808,6.41632387071589,2.54805239706646,0,35.0715486438167,39.2707791486403,40.4419556011827,24.777901899036,35.9923658269569,35.0323448192986,25.502343034622,27.4018930480927,32.0555541185921,33.7618714837875,24.693628498498,36.0663117116169,11.3709685157812,44.5366019313328,15.0383793831479,27.1768307911647,19.8757366614354,14.5462575940567,20.5030937339934,50.6510778829977,46.0782754989601,19.1592791406444,25.760251768772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| ||
|EntrezGene=67048 | |||
|HGNC= | |||
|UniProt=Q78T54,F2Z447 | |||
|association_with_transcript=0bp_to_ENSMUST00000101496,ENSMUST00000114575,ENSMUST00000138979,ENSMUST00000154054,NM_001081356,uc009tkf.2_5end | |||
|description=CAGE_peak_1_at_Vma21_5end | |||
|id=chrX:69062111..69062152,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.85e-10!50;CL:0000221!6.17e-08!44;CL:0000133!6.17e-08!44;CL:0002319!1.51e-07!43;CL:0000393!3.75e-07!39;CL:0000211!3.75e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.17e-08,44;CL:0000133,6.17e-08,44;CL:0002319,1.51e-07,43;CL:0000393,3.75e-07,39;CL:0000211,3.75e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.18e-22!102;UBERON:0000924!1.18e-22!102;UBERON:0006601!1.18e-22!102;UBERON:0000073!1.85e-18!75;UBERON:0001016!1.85e-18!75;UBERON:0001017!1.40e-17!73;UBERON:0005743!1.40e-17!73;UBERON:0002346!2.70e-17!71;UBERON:0003075!2.70e-17!71;UBERON:0007284!2.70e-17!71;UBERON:0000033!4.37e-16!63;UBERON:0004111!5.92e-16!122;UBERON:0000025!5.91e-15!114;UBERON:0000955!6.27e-14!50;UBERON:0006238!6.27e-14!50;UBERON:0001049!7.53e-14!52;UBERON:0005068!7.53e-14!52;UBERON:0006241!7.53e-14!52;UBERON:0007135!7.53e-14!52;UBERON:0002616!2.53e-13!49;UBERON:0002020!1.28e-10!34;UBERON:0003056!2.86e-10!49;UBERON:0000119!1.51e-09!183;UBERON:0002791!4.02e-09!29;UBERON:0003528!4.02e-09!29;UBERON:0001893!4.02e-09!29;UBERON:0000483!7.46e-09!181;UBERON:0003080!9.88e-09!40;UBERON:0000475!1.91e-08!200;UBERON:0002780!3.20e-08!39;UBERON:0001890!3.20e-08!39;UBERON:0006240!3.20e-08!39;UBERON:0002619!2.45e-07!17;UBERON:0000956!2.76e-07!21;UBERON:0001869!2.76e-07!21;UBERON:0000203!2.76e-07!21;UBERON:0002021!3.98e-07!10;UBERON:0000411!3.98e-07!10;UBERON:0001950!3.98e-07!10;UBERON:0000477!4.42e-07!154;UBERON:0007811!6.44e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.82e-21,95;UBERON:0000924,9.82e-21,95;UBERON:0006601,9.82e-21,95;UBERON:0010314,4.60e-20,92;UBERON:0001016,1.85e-18,75;UBERON:0001017,1.40e-17,73;UBERON:0010371,6.15e-17,73;UBERON:0004111,5.92e-16,122;UBERON:0002346,1.12e-15,64;UBERON:0003075,1.12e-15,64;UBERON:0007284,1.12e-15,64;UBERON:0000025,5.91e-15,114;UBERON:0000073,5.99e-15,54;UBERON:0001049,7.53e-14,52;UBERON:0005068,7.53e-14,52;UBERON:0006241,7.53e-14,52;UBERON:0007135,7.53e-14,52;UBERON:0000955,3.18e-12,47;UBERON:0006238,3.18e-12,47;UBERON:0002616,1.22e-11,46;UBERON:0002020,1.28e-10,34;UBERON:0003056,2.86e-10,49;UBERON:0003528,4.02e-09,29;UBERON:0002791,4.02e-09,29;UBERON:0001893,4.02e-09,29;UBERON:0003080,9.88e-09,40;UBERON:0002780,3.20e-08,39;UBERON:0001890,3.20e-08,39;UBERON:0006240,3.20e-08,39;UBERON:0000119,4.39e-08,176;UBERON:0000483,1.86e-07,174;UBERON:0002619,2.45e-07,17;UBERON:0000956,2.76e-07,21;UBERON:0001869,2.76e-07,21;UBERON:0000203,2.76e-07,21;UBERON:0002021,3.98e-07,10;UBERON:0000411,3.98e-07,10;UBERON:0001950,3.98e-07,10 | |||
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| |||
|short_description=p1@Vma21 | |||
}} |
Revision as of 20:01, 14 September 2013
Short description: | p1@Vma21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vma21_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000101496, ENSMUST00000114575, ENSMUST00000138979, ENSMUST00000154054, NM_001081356, uc009tkf.2_5end |
EntrezGene: | Vma21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.17e-08 | 44 |
neurectodermal cell | 6.17e-08 | 44 |
neural cell | 1.51e-07 | 43 |
electrically responsive cell | 3.75e-07 | 39 |
electrically active cell | 3.75e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.