FFCP PHASE1:Hg19::chr1:40627038..40627071,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6018 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10025 | |||
|TSSclassifier=strong | |||
|UniProt=Q13129 | |||
|association_with_transcript=0bp_to_ENST00000372771,NM_012421,uc001cfc.3_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_RLF_5end | |||
|id=chr1:40627038..40627071,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.11e-38!140;CL:0000037!1.54e-36!172;CL:0000566!1.54e-36!172;CL:0002032!1.31e-33!165;CL:0000837!1.31e-33!165;CL:0000988!5.41e-32!182;CL:0002031!6.00e-31!124;CL:0002087!3.13e-28!119;CL:0000766!1.64e-24!76;CL:0000763!5.24e-23!112;CL:0000049!5.24e-23!112;CL:0000557!1.49e-21!71;CL:0002057!2.63e-20!42;CL:0000839!3.15e-20!70;CL:0002009!1.64e-18!65;CL:0000860!5.86e-18!45;CL:0002194!2.27e-17!63;CL:0000576!2.27e-17!63;CL:0000040!2.27e-17!63;CL:0000559!2.27e-17!63;CL:0000838!8.80e-10!52;CL:0000542!1.02e-09!53;CL:0000051!1.02e-09!53;CL:0000791!1.18e-07!18;CL:0000789!1.18e-07!18;CL:0002420!1.18e-07!18;CL:0002419!1.18e-07!18;CL:0000790!1.18e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-15;33!CL:0002057;1.06e-15;33!CL:0000576;4.48e-14;48!CL:0000766;2.47e-12;69!CL:0000473;1.92e-11;39!CL:0000234;1.92e-11;39!CL:0002087;3.29e-10;104!CL:0000738;1.17e-08;136!CL:0000791;9.77e-08;18!CL:0000789;9.77e-08;18!CL:0002419;9.77e-08;18!CL:0000763;2.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.14e-40,136;CL:0000037,6.50e-38,168;CL:0002032,6.04e-35,161;CL:0000837,6.04e-35,161;CL:0000988,5.81e-34,177;CL:0002031,1.52e-32,120;CL:0002087,9.10e-30,115;CL:0000766,1.60e-26,72;CL:0000763,2.21e-24,108;CL:0000049,2.21e-24,108;CL:0000557,1.82e-23,67;CL:0000839,4.59e-22,66;CL:0002009,2.50e-20,61;CL:0000860,2.63e-20,42;CL:0002057,2.63e-20,42;CL:0002194,3.87e-19,59;CL:0000576,3.87e-19,59;CL:0000040,3.87e-19,59;CL:0000559,3.87e-19,59;CL:0000473,6.24e-18,48;CL:0000234,6.24e-18,48;CL:0000838,8.79e-10,52;CL:0000542,1.02e-09,53;CL:0000051,1.02e-09,53;CL:0000791,1.18e-07,18;CL:0000789,1.18e-07,18;CL:0002420,1.18e-07,18;CL:0002419,1.18e-07,18;CL:0000790,1.18e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;6.15e-15;42!CL:0000790;9.77e-08;18!CL:0000049;2.19e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-19!102;UBERON:0003061!1.15e-19!102;UBERON:0002193!1.27e-16!112;UBERON:0002371!4.55e-16!80;UBERON:0001474!4.77e-16!86;UBERON:0007023!2.11e-15!115;UBERON:0004765!5.52e-11!101;UBERON:0001434!5.52e-11!101;UBERON:0002405!1.82e-10!115;UBERON:0001049!1.44e-09!57;UBERON:0005068!1.44e-09!57;UBERON:0006241!1.44e-09!57;UBERON:0007135!1.44e-09!57;UBERON:0002780!1.74e-08!41;UBERON:0001890!1.74e-08!41;UBERON:0006240!1.74e-08!41;UBERON:0003080!2.34e-08!42;UBERON:0002616!2.03e-07!59;UBERON:0002020!6.62e-07!34;UBERON:0003528!6.62e-07!34;UBERON:0001893!7.03e-07!34;UBERON:0000955!8.02e-07!69;UBERON:0006238!8.02e-07!69;UBERON:0001017!9.27e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.61e-21,98;UBERON:0003061,5.61e-21,98;UBERON:0002193,1.11e-17,108;UBERON:0002371,1.99e-17,76;UBERON:0001474,2.50e-17,82;UBERON:0002405,2.72e-15,93;UBERON:0007023,3.64e-15,114;UBERON:0004765,2.92e-14,90;UBERON:0001434,3.52e-11,100;UBERON:0001049,1.12e-09,56;UBERON:0005068,1.12e-09,56;UBERON:0006241,1.12e-09,56;UBERON:0007135,1.12e-09,56;UBERON:0000073,3.98e-09,53;UBERON:0002616,3.98e-09,53;UBERON:0002780,1.74e-08,41;UBERON:0001890,1.74e-08,41;UBERON:0003080,1.74e-08,41;UBERON:0006240,1.74e-08,41;UBERON:0003528,6.62e-07,34;UBERON:0002020,6.62e-07,34;UBERON:0001893,7.03e-07,34;UBERON:0000955,7.10e-07,68;UBERON:0006238,7.10e-07,68;UBERON:0001017,8.42e-07,81 | |||
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| |||
|short_description=p1@RLF | |||
}} |
Revision as of 18:02, 10 January 2014
Short description: | p1@RLF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RLF_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000372771, NM_012421, uc001cfc.3_5end |
EntrezGene: | RLF |
HGNC: | 10025 |
UniProt: | Q13129 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.61e-21 | 98 |
blood island | 5.61e-21 | 98 |
hemolymphoid system | 1.11e-17 | 108 |
bone marrow | 1.99e-17 | 76 |
bone element | 2.50e-17 | 82 |
immune system | 2.72e-15 | 93 |
adult organism | 3.64e-15 | 114 |
skeletal element | 2.92e-14 | 90 |
skeletal system | 3.52e-11 | 100 |
neural tube | 1.12e-09 | 56 |
neural rod | 1.12e-09 | 56 |
future spinal cord | 1.12e-09 | 56 |
neural keel | 1.12e-09 | 56 |
regional part of nervous system | 3.98e-09 | 53 |
regional part of brain | 3.98e-09 | 53 |
regional part of forebrain | 1.74e-08 | 41 |
forebrain | 1.74e-08 | 41 |
anterior neural tube | 1.74e-08 | 41 |
future forebrain | 1.74e-08 | 41 |
brain grey matter | 6.62e-07 | 34 |
gray matter | 6.62e-07 | 34 |
telencephalon | 7.03e-07 | 34 |
brain | 7.10e-07 | 68 |
future brain | 7.10e-07 | 68 |
central nervous system | 8.42e-07 | 81 |