FFCP PHASE1:Hg19::chr10:13934004..13934022,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:13934004..13934022,- | |||
|id=chr10:13934004..13934022,- | |||
|ontology_enrichment_celltype=CL:0000055!3.65e-22!180;CL:0000222!5.14e-20!119;CL:0002139!7.45e-19!24;CL:0000115!9.44e-19!35;CL:0000071!7.52e-15!18;CL:0002546!7.52e-15!18;CL:0000359!3.10e-14!32;CL:0002078!3.67e-14!44;CL:0000393!9.51e-14!60;CL:0000211!9.51e-14!60;CL:0002321!1.74e-13!248;CL:0000220!4.04e-13!246;CL:0000183!4.46e-12!59;CL:0000187!8.42e-12!54;CL:0000680!2.69e-11!57;CL:0000056!2.69e-11!57;CL:0000355!2.69e-11!57;CL:0000192!4.70e-11!42;CL:0000514!4.70e-11!42;CL:0000213!3.83e-10!57;CL:0000215!3.83e-10!57;CL:0000057!1.06e-08!75;CL:0002319!6.02e-08!25;CL:1000413!6.51e-08!9;CL:0002620!3.40e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.14e-37;24!CL:0000115;3.24e-30;36!CL:0000071;9.63e-29;18!CL:0002078;4.18e-17;45!CL:0000359;2.91e-15;32!CL:1000413;1.36e-14;9!CL:0000213;2.43e-12;58!CL:0000215;2.43e-12;58!CL:0002543;3.58e-11;6!CL:0002544;2.84e-10;6!CL:0002138;1.01e-09;6!CL:0000192;1.45e-08;43!CL:0002539;2.08e-08;10!CL:0002594;8.93e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.97e-37,24;CL:0000115,1.13e-35,36;CL:0000071,1.00e-28,18;CL:0002546,1.00e-28,18;CL:0002078,2.21e-26,45;CL:0000222,4.27e-24,121;CL:0000213,1.40e-19,58;CL:0000215,1.40e-19,58;CL:0000359,3.47e-16,32;CL:1000413,1.56e-14,9;CL:0002321,1.35e-13,250;CL:0000192,1.57e-11,43;CL:0000514,1.57e-11,43;CL:0002543,3.52e-11,6;CL:0002544,3.21e-10,6;CL:0005020,9.44e-10,6;CL:0002138,9.44e-10,6;CL:0005022,9.44e-10,6;CL:0000393,7.08e-09,61;CL:0000211,7.08e-09,61;CL:0000187,1.10e-08,55;CL:0002539,1.75e-08,10;CL:0000680,6.37e-08,58;CL:0000056,6.37e-08,58;CL:0000355,6.37e-08,58;CL:0002594,5.49e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;9.63e-29;18!CL:0005022;1.01e-09;6!CL:0000514;1.45e-08;43!CL:0000222;1.54e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.03e-34!69;UBERON:0002049!4.85e-34!79;UBERON:0007798!4.85e-34!79;UBERON:0004872!5.42e-34!84;UBERON:0001981!2.83e-32!60;UBERON:0007500!2.83e-32!60;UBERON:0004537!2.83e-32!60;UBERON:0006965!2.83e-32!60;UBERON:0004535!1.02e-27!110;UBERON:0001009!1.16e-27!113;UBERON:0001637!5.05e-22!42;UBERON:0003509!5.05e-22!42;UBERON:0004572!5.05e-22!42;UBERON:0000119!3.36e-21!312;UBERON:0003914!6.61e-21!118;UBERON:0000483!3.59e-20!309;UBERON:0004111!1.76e-19!241;UBERON:0000025!2.86e-19!194;UBERON:0000477!2.49e-18!286;UBERON:0004573!2.42e-16!33;UBERON:0004571!2.42e-16!33;UBERON:0000468!3.10e-16!659;UBERON:0000467!7.75e-16!625;UBERON:0000480!1.21e-15!626;UBERON:0004290!2.83e-15!70;UBERON:0001986!7.52e-15!18;UBERON:0004638!7.52e-15!18;UBERON:0004852!7.52e-15!18;UBERON:0000914!1.91e-14!83;UBERON:0002329!1.91e-14!83;UBERON:0003077!1.91e-14!83;UBERON:0003059!1.91e-14!83;UBERON:0007282!1.91e-14!83;UBERON:0009618!1.91e-14!83;UBERON:0007285!1.91e-14!83;UBERON:0000490!2.00e-13!138;UBERON:0000486!3.17e-13!82;UBERON:0000475!3.32e-13!365;UBERON:0000487!1.03e-12!22;UBERON:0001134!1.07e-12!61;UBERON:0002036!1.07e-12!61;UBERON:0003082!1.07e-12!61;UBERON:0000947!3.48e-12!21;UBERON:0010191!3.48e-12!21;UBERON:0002385!1.09e-11!63;UBERON:0001015!1.09e-11!63;UBERON:0000383!1.09e-11!63;UBERON:0006914!7.21e-11!25;UBERON:0000481!1.78e-09!347;UBERON:0000922!2.45e-09!612;UBERON:0000923!3.43e-08!604;UBERON:0005291!3.43e-08!604;UBERON:0006598!3.43e-08!604;UBERON:0002532!3.43e-08!604;UBERON:0005256!3.87e-08!143;UBERON:0002050!4.71e-08!605;UBERON:0005423!4.71e-08!605;UBERON:0000948!5.56e-08!24;UBERON:0005498!5.56e-08!24;UBERON:0004140!5.56e-08!24;UBERON:0009881!5.56e-08!24;UBERON:0004141!5.56e-08!24;UBERON:0003084!5.56e-08!24;UBERON:0007005!5.56e-08!24;UBERON:0004139!5.56e-08!24;UBERON:0004291!5.56e-08!24;UBERON:0003915!6.51e-08!9;UBERON:0004700!6.51e-08!9;UBERON:0001917!6.51e-08!9;UBERON:0007100!8.41e-08!27;UBERON:0004121!7.56e-07!169;UBERON:0000073!8.04e-07!94;UBERON:0001016!8.04e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.63e-29;18!UBERON:0001986;9.63e-29;18!UBERON:0004852;9.63e-29;18!UBERON:0000055;1.95e-25;65!UBERON:0000487;9.69e-25;22!UBERON:0007500;1.08e-23;56!UBERON:0001981;1.08e-23;56!UBERON:0004537;1.08e-23;56!UBERON:0001637;1.50e-22;42!UBERON:0003509;1.50e-22;42!UBERON:0004572;1.50e-22;42!UBERON:0006914;5.66e-21;25!UBERON:0004573;6.46e-19;33!UBERON:0004571;6.46e-19;33!UBERON:0002049;6.02e-18;75!UBERON:0007798;6.02e-18;75!UBERON:0003914;3.61e-17;74!UBERON:0000490;1.56e-16;33!UBERON:0000947;1.70e-15;21!UBERON:0010191;1.70e-15;21!UBERON:0003915;1.36e-14;9!UBERON:0004700;1.36e-14;9!UBERON:0001917;1.36e-14;9!UBERON:0004535;2.36e-11;109!UBERON:0010260;6.85e-11;9!UBERON:0000025;7.00e-10;93!UBERON:0001009;1.05e-09;112!UBERON:0001638;4.59e-09;9!UBERON:0003920;4.59e-09;9!UBERON:0004582;4.59e-09;9!UBERON:0004237;2.08e-08;10!UBERON:0004695;2.08e-08;10!UBERON:0002111;2.08e-08;10!UBERON:0004178;2.08e-08;10!UBERON:0003513;3.36e-07;7!UBERON:0001473;5.02e-07;8!UBERON:0004536;5.02e-07;8!UBERON:0006558;5.02e-07;8!UBERON:0001310;8.93e-07;4 | |||
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| |||
|short_description=p@chr10:13934004..13934022,- | |||
}} |
Revision as of 01:48, 11 January 2014
Short description: | p@chr10:13934004..13934022, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13934004..13934022, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.97e-37 | 24 |
endothelial cell | 1.13e-35 | 36 |
blood vessel endothelial cell | 1.00e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.00e-28 | 18 |
meso-epithelial cell | 2.21e-26 | 45 |
mesodermal cell | 4.27e-24 | 121 |
lining cell | 1.40e-19 | 58 |
barrier cell | 1.40e-19 | 58 |
vascular associated smooth muscle cell | 3.47e-16 | 32 |
endothelial cell of artery | 1.56e-14 | 9 |
embryonic cell | 1.35e-13 | 250 |
smooth muscle cell | 1.57e-11 | 43 |
smooth muscle myoblast | 1.57e-11 | 43 |
vein endothelial cell | 3.52e-11 | 6 |
aortic endothelial cell | 3.21e-10 | 6 |
lymphangioblast | 9.44e-10 | 6 |
endothelial cell of lymphatic vessel | 9.44e-10 | 6 |
vascular lymphangioblast | 9.44e-10 | 6 |
electrically responsive cell | 7.08e-09 | 61 |
electrically active cell | 7.08e-09 | 61 |
muscle cell | 1.10e-08 | 55 |
aortic smooth muscle cell | 1.75e-08 | 10 |
muscle precursor cell | 6.37e-08 | 58 |
myoblast | 6.37e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.37e-08 | 58 |
smooth muscle cell of the umbilical artery | 5.49e-07 | 4 |