FFCP PHASE1:Hg19::chr10:98945919..98945934,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6585 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11085 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T0V3,E7EWQ8,A6H8V1,O75093,Q5T0V1,Q5T0V4 | |||
|association_with_transcript=-236bp_to_ENST00000371054,ENST00000371057,NM_003061,uc001kmw.2,uc001kmz.2,uc009xvh.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SLIT1_5end | |||
|id=chr10:98945919..98945934,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.35e-09;3!UBERON:0003057;1.35e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.83e-64!34;UBERON:0002020!9.21e-64!34;UBERON:0003528!9.21e-64!34;UBERON:0001869!3.48e-63!32;UBERON:0002791!1.31e-60!33;UBERON:0002780!2.35e-52!41;UBERON:0001890!2.35e-52!41;UBERON:0006240!2.35e-52!41;UBERON:0002619!2.34e-51!22;UBERON:0003080!5.52e-51!42;UBERON:0001049!6.02e-46!57;UBERON:0005068!6.02e-46!57;UBERON:0006241!6.02e-46!57;UBERON:0007135!6.02e-46!57;UBERON:0000956!6.86e-45!25;UBERON:0000203!6.86e-45!25;UBERON:0001950!2.38e-44!20;UBERON:0001017!1.21e-42!82;UBERON:0000955!3.41e-42!69;UBERON:0006238!3.41e-42!69;UBERON:0000073!9.74e-41!94;UBERON:0001016!9.74e-41!94;UBERON:0002616!1.08e-40!59;UBERON:0005743!2.50e-40!86;UBERON:0003056!2.36e-33!61;UBERON:0003075!1.84e-30!86;UBERON:0007284!1.84e-30!86;UBERON:0002346!8.47e-29!90;UBERON:0000153!5.94e-26!129;UBERON:0007811!5.94e-26!129;UBERON:0000033!4.65e-24!123;UBERON:0000200!2.48e-23!6;UBERON:0007023!7.83e-23!115;UBERON:0004121!1.19e-20!169;UBERON:0002308!5.04e-20!9;UBERON:0000125!5.04e-20!9;UBERON:0000924!5.51e-20!173;UBERON:0006601!5.51e-20!173;UBERON:0001871!5.32e-17!7;UBERON:0000369!2.24e-16!4;UBERON:0002435!2.24e-16!4;UBERON:0000204!2.24e-16!4;UBERON:0010082!2.24e-16!4;UBERON:0002420!3.62e-15!9;UBERON:0007245!3.62e-15!9;UBERON:0010009!3.62e-15!9;UBERON:0010011!3.62e-15!9;UBERON:0000454!3.62e-15!9;UBERON:0009663!5.57e-14!7;UBERON:0000349!4.94e-13!5;UBERON:0002021!8.30e-13!5;UBERON:0005383!1.50e-12!3;UBERON:0005382!1.50e-12!3;UBERON:0002771!3.78e-12!3;UBERON:0000064!3.88e-10!219;UBERON:0000025!1.18e-09!194;UBERON:0001870!2.66e-09!2;UBERON:0001954!4.82e-09!2;UBERON:0003022!4.82e-09!2;UBERON:0002421!4.82e-09!2;UBERON:0002600!4.82e-09!2;UBERON:0001873!5.86e-09!2;UBERON:0010122!5.86e-09!2;UBERON:0002148!4.54e-08!2;UBERON:0009662!4.54e-08!2;UBERON:0001872!1.07e-07!5;UBERON:0000475!6.01e-07!365;UBERON:0000483!6.41e-07!309;UBERON:0000477!8.77e-07!286;UBERON:0000119!8.84e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001882;5.22e-26;1!UBERON:0007190;5.22e-26;1!UBERON:0005403;5.22e-26;1!UBERON:0001869;5.53e-18;32!UBERON:0000200;1.70e-17;6!UBERON:0001893;8.30e-15;34!UBERON:0002702;1.00e-13;2!UBERON:0003528;4.13e-13;34!UBERON:0002020;4.13e-13;34!UBERON:0002791;1.48e-12;32!UBERON:0001950;2.56e-11;20!UBERON:0002780;7.94e-11;41!UBERON:0001890;7.94e-11;41!UBERON:0002619;2.15e-10;22!UBERON:0001870;1.35e-09;3!UBERON:0002240;1.35e-09;3!UBERON:0005174;1.35e-09;3!UBERON:0001137;1.35e-09;3!UBERON:0000956;2.86e-09;25!UBERON:0000203;2.86e-09;25!UBERON:0001017;3.83e-08;75!UBERON:0000073;6.58e-08;53!UBERON:0002616;6.58e-08;53!UBERON:0000955;8.00e-08;68!UBERON:0001016;9.45e-08;83!UBERON:0000369;1.64e-07;4!UBERON:0002435;1.64e-07;4!UBERON:0000204;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,4.61e-26,1;UBERON:0005403,4.61e-26,1;UBERON:0007190,5.93e-26,1;UBERON:0001869,5.05e-19,32;UBERON:0001893,5.89e-18,34;UBERON:0000200,1.44e-17,6;UBERON:0001049,9.39e-16,56;UBERON:0005068,9.39e-16,56;UBERON:0006241,9.39e-16,56;UBERON:0007135,9.39e-16,56;UBERON:0002780,5.11e-15,41;UBERON:0001890,5.11e-15,41;UBERON:0003080,5.11e-15,41;UBERON:0006240,5.11e-15,41;UBERON:0001017,1.11e-14,81;UBERON:0002702,7.30e-14,2;UBERON:0001016,3.00e-13,89;UBERON:0000955,6.68e-13,68;UBERON:0006238,6.68e-13,68;UBERON:0002791,1.72e-12,32;UBERON:0003528,8.37e-12,34;UBERON:0002020,8.37e-12,34;UBERON:0000073,9.64e-12,53;UBERON:0002616,9.64e-12,53;UBERON:0001950,2.43e-11,20;UBERON:0003075,7.40e-11,82;UBERON:0007284,7.40e-11,82;UBERON:0002619,2.05e-10,22;UBERON:0002346,2.32e-10,86;UBERON:0003056,2.94e-10,61;UBERON:0001870,1.10e-09,3;UBERON:0002240,1.54e-09,3;UBERON:0005174,1.54e-09,3;UBERON:0001137,1.54e-09,3;UBERON:0000956,2.75e-09,25;UBERON:0000203,2.75e-09,25;UBERON:0010371,1.36e-08,104;UBERON:0000369,1.59e-07,4;UBERON:0002435,1.59e-07,4;UBERON:0000204,1.59e-07,4;UBERON:0010082,1.59e-07,4;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171;UBERON:0010314,8.82e-07,132 | |||
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|short_description=p5@SLIT1 | |||
}} |
Revision as of 04:24, 11 January 2014
Short description: | p5@SLIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLIT1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -236bp_to_ENST00000371054, ENST00000371057, NM_003061, uc001kmw.2, uc001kmz.2, uc009xvh.1_5end |
EntrezGene: | SLIT1 |
HGNC: | 11085 |
UniProt: | Q5T0V3E7EWQ8A6H8V1O75093Q5T0V1Q5T0V4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data