FFCP PHASE1:Hg19::chr11:65325664..65325737,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NS15,Q8WYU6,B9EG76 | |||
|association_with_transcript=0bp_to_ENST00000301873,NM_001130144,NM_001164266,NM_021070,uc001oei.2,uc001oej.2,uc010roi.1,uc010roj.1_5end | |||
|description=CAGE_peak_1_at_LTBP3_5end | |||
|id=chr11:65325664..65325737,- | |||
|ontology_enrichment_celltype=CL:0000055!4.85e-14!180;CL:0000057!1.46e-09!75;CL:0000183!7.62e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.48e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.44e-25!365;UBERON:0004111!8.69e-21!241;UBERON:0007023!6.28e-20!115;UBERON:0000477!1.54e-19!286;UBERON:0000481!2.00e-19!347;UBERON:0000025!6.40e-19!194;UBERON:0000119!2.28e-18!312;UBERON:0000483!4.96e-18!309;UBERON:0003075!2.81e-14!86;UBERON:0007284!2.81e-14!86;UBERON:0002346!2.06e-13!90;UBERON:0001049!1.97e-11!57;UBERON:0005068!1.97e-11!57;UBERON:0006241!1.97e-11!57;UBERON:0007135!1.97e-11!57;UBERON:0002616!6.80e-11!59;UBERON:0000468!7.53e-11!659;UBERON:0000033!3.30e-10!123;UBERON:0003914!3.50e-10!118;UBERON:0005743!7.87e-10!86;UBERON:0002100!8.59e-10!216;UBERON:0000153!9.16e-10!129;UBERON:0007811!9.16e-10!129;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0003103!4.44e-09!69;UBERON:0001017!6.22e-09!82;UBERON:0000467!8.74e-09!625;UBERON:0003056!1.16e-08!61;UBERON:0000480!1.49e-08!626;UBERON:0000073!2.67e-08!94;UBERON:0001016!2.67e-08!94;UBERON:0004872!2.89e-08!84;UBERON:0005256!4.28e-08!143;UBERON:0004121!6.07e-08!169;UBERON:0002049!8.87e-08!79;UBERON:0007798!8.87e-08!79;UBERON:0000924!1.26e-07!173;UBERON:0006601!1.26e-07!173;UBERON:0001009!2.84e-07!113;UBERON:0003080!3.49e-07!42;UBERON:0000064!4.33e-07!219;UBERON:0004535!7.41e-07!110;UBERON:0002385!7.52e-07!63;UBERON:0001015!7.52e-07!63;UBERON:0000383!7.52e-07!63;UBERON:0002780!7.88e-07!41;UBERON:0001890!7.88e-07!41;UBERON:0006240!7.88e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.55e-20,240;UBERON:0007023,1.12e-19,114;UBERON:0000119,1.07e-18,309;UBERON:0000483,2.33e-18,306;UBERON:0000025,3.98e-18,192;UBERON:0010314,2.14e-16,132;UBERON:0003075,1.15e-14,82;UBERON:0007284,1.15e-14,82;UBERON:0002346,9.57e-14,86;UBERON:0003104,5.22e-12,160;UBERON:0009142,5.22e-12,160;UBERON:0001049,4.58e-11,56;UBERON:0005068,4.58e-11,56;UBERON:0006241,4.58e-11,56;UBERON:0007135,4.58e-11,56;UBERON:0000073,5.74e-10,53;UBERON:0002616,5.74e-10,53;UBERON:0003914,7.29e-10,117;UBERON:0010371,1.08e-09,104;UBERON:0000955,2.39e-09,68;UBERON:0006238,2.39e-09,68;UBERON:0003103,1.02e-08,68;UBERON:0002100,1.24e-08,199;UBERON:0001017,1.42e-08,81;UBERON:0003056,1.65e-08,61;UBERON:0005256,3.86e-08,122;UBERON:0004121,4.34e-08,171;UBERON:0000924,4.34e-08,171;UBERON:0006601,4.34e-08,171;UBERON:0004872,4.92e-08,83;UBERON:0002049,1.65e-07,78;UBERON:0007798,1.65e-07,78;UBERON:0002385,3.29e-07,64;UBERON:0001015,3.29e-07,64;UBERON:0000383,3.29e-07,64;UBERON:0001016,3.69e-07,89;UBERON:0001009,4.52e-07,112;UBERON:0001134,7.25e-07,62;UBERON:0002036,7.25e-07,62;UBERON:0003082,7.25e-07,62;UBERON:0002780,7.67e-07,41;UBERON:0001890,7.67e-07,41;UBERON:0003080,7.67e-07,41;UBERON:0006240,7.67e-07,41 | |||
|phase1_expression=49.598197540862,38.538094300377,62.5837554186112,52.0381151436278,94.755752018585,84.6168368377358,15.1979926900986,25.9005148105001,66.6023351909588,9.82935746006035,18.8406315352555,12.66959958355,22.9477271058755,63.739671774424,125.59960540088,26.893005858071,28.3266428171269,32.8639540674318,33.667363116545,87.0465880602891,156.876531566831,171.146277927036,37.7831503012995,31.7548666169091,39.4203888327681,0.152826811495903,0.246301768349837,0.0787107813136792,3.93364276848904,3.0706351847777,4.64448369948228,3.67768489791571,2.409647350226,5.9160641626686,0,0,7.04641054403633,6.09394949385065,4.8130667392834,6.2933152507597,4.25439401055856,4.53451132426571,2.57575567634187,1.16318591023652,0.755751887377619,0.970336244751265,1.16214518452842,0.822335776043652,0.619412741790207,1.43846196161075,0.768482119587302,0.945928919554341,1.37898272294647,0.645484683583826,0,2.07066573496865,0.272906150057846,0.449446968890169,1.83650335422542,1.60464513538047,0,0.329851300186716,0.398927315243264,2.13112375266347,1.16083695451434,1.70215567407342,0.622822248995575,1.50749199154046,1.0429658368404,0.434377689410233,9.6863920421339,0.368277635987565,0.316462387440884,0,0.212604299965044,0.209658645508376,0.898629049171961,1.05123824989054,0.32145117339416,0,0,0,1.75996244461323,0,0.889509253863555,0.853460445133014,0.800791974072025,0,0,0,3.41527781465669,0.587237189370939,1.52909291250092,2.64342657158052,6.1655941927969,3.16060901730092,15.7367816091066,20.8295704257057,16.6537214189602,7.35620579718984,7.17028986593899,7.57516489175573,9.74133642039557,5.45911238737351,5.89211814949674,3.54454231333794,7.31170432165542,6.14838334683241,4.55207716459574,19.4036727432338,13.2648008537207,10.1431080007268,15.7183756951784,12.3068780921268,11.4989076185474,8.15827267422477,3.44898444241729,3.09264700934367,6.57851199250707,4.45991580053735,6.51083453856419,3.8018081777935,6.625305239422,6.39933055772092,6.24653632761729,6.86654030927649,3.28451198768419,9.07230344511296,7.2208852861547,14.0479671766315,246.244934977101,50.9732653374763,38.2309059912156,80.6009309817583,99.766244216542,123.698927192543,71.5757352345989,224.338675209515,38.2866009514475,56.7627257504164,69.8286546260352,44.5983752069712,11.2931539370688,4.82019775619758,0,0.870648686496336,0.26591592103773,6.20075623193889,4.57595928624102,4.45749001595478,6.36039703573456,25.8070378531837,25.688397118962,38.4409400508327,61.2469176866463,22.8347974810256,12.9576879252823,16.0218390684984,15.6537155582153,15.0624275744102,24.1697590265488,12.1643536914962,49.0564735671821,11.7652185710678,51.0389427165509,13.9307576123164,20.8812316542338,13.4007661775153,10.7321646226118,14.2389848935219,24.732235430605,1.31780417436063,0,8.72188104285069,94.9216427738058,43.68752652428,56.4063110264312,391.245150701382,68.0963293820845,52.7036944133769,26.6872489324262,92.0069955596007,33.299580787775,28.4239518067042,17.0000379237997,61.2997581961972,81.2408053516798,19.9173217058727,50.2577723696816,7.41613368007784,53.0542815958894,5.63685593490071,3.39933183173076,4.6348766211742,30.4189715169791,13.6346092216062,68.9182960442356,55.8361342922565,52.4205890070541,63.7112953356619,165.282172617735,3.87173062094352,10.2597186295011,9.42017992646222,27.6555901154928,28.8098528051078,82.9314085164414,13.1581332465624,76.0612055320775,46.5555107624477,39.6312655168381,91.8278754018271,35.9653327042152,87.8554241555595,44.2958118069184,78.1434418277063,31.1798416515836,68.1571190459109,56.886837360941,75.9736467048416,126.383414935915,21.4601969224874,12.8866050155971,3.47869535693934,2.72746120590835,3.15485054927904,0.853815942907168,0.265059536642971,0.69716365721711,2.17688215532278,0.252320850875628,0.72995471815166,15.6449532329816,47.5998294262735,5.52539685409922,137.917274625498,85.1817788370111,0.473227200159376,0.505754070234305,0.241011029883482,0.220587945464788,0.653638332277218,0,0.269662616320329,0.392442930250692,0,9.59602091012043,79.9378110679641,46.0962892691168,179.350627890361,22.8159062679296,31.450470933684,34.2658145875214,0,5.411491295897,47.1811478320945,4.17051084552777,2.24803506515239,2.11110842064425,8.24037161910913,10.4258657699304,29.1181739878282,63.5057904911202,50.6615869741086,149.109041679494,13.1373467462577,19.9083770407943,17.8838903100522,4.74122638775565,3.43394464837949,1.47730203652438,0.936017060556951,3.56714789492948,0.93733833986777,2.85569617938061,1.55952606966625,1.88072897675981,4.35950907770943,8.43441894163465,2.46331618947972,17.6096868026452,10.9883901236609,11.241356366523,12.7504857760644,14.3505241100302,31.705039321337,32.8208852188132,30.7930402840869,17.9948112230816,15.3174959500398,27.1535110999049,20.2957262665103,88.9358540419891,16.4277760238928,65.15294474192,332.620494642251,27.049688081792,55.3151282496531,42.6430491336601,13.3747834616314,17.0218958427934,18.649552531127,54.7605715710705,164.956968038999,18.9345277459577,12.3779750031619,46.5563452852735,9.50342247520115,6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| |||
|short_description=p1@LTBP3 | |||
}} |
Revision as of 08:39, 11 January 2014
Short description: | p1@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000301873, NM_001130144, NM_001164266, NM_021070, uc001oei.2, uc001oej.2, uc010roi.1, uc010roj.1_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | Q9NS15Q8WYU6B9EG76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.48e-10 | 76 |