FFCP PHASE1:Hg19::chr12:57522439..57522458,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6692 | |||
|TSSclassifier=strong | |||
|UniProt=Q86SW0 | |||
|association_with_transcript=-40bp_to_ENST00000338962_5end | |||
|coexpression_cluster_id=C3304 | |||
|description=CAGE_peak_2_at_LRP1_5end | |||
|id=chr12:57522439..57522458,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-21!180;CL:0000057!4.40e-17!75;CL:0000136!8.18e-09!15;CL:0000680!1.19e-08!57;CL:0000056!1.19e-08!57;CL:0000355!1.19e-08!57;CL:0002620!9.33e-08!23;CL:0000187!9.92e-08!54;CL:0000183!1.30e-07!59;CL:0000048!6.99e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.80e-08;13!CL:0002620;6.69e-08;23!CL:0000134;3.12e-07;55!CL:0000057;4.69e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.32e-18,76;CL:0000048,1.08e-09,427;CL:0000680,2.94e-09,58;CL:0000056,2.94e-09,58;CL:0000355,2.94e-09,58;CL:0000136,5.52e-09,15;CL:0000723,1.53e-08,433;CL:0000187,2.67e-08,55;CL:0002620,6.67e-08,23;CL:0000034,8.51e-08,441;CL:0000192,6.34e-07,43;CL:0000514,6.34e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.10e-17!659;UBERON:0000467!4.61e-13!625;UBERON:0000480!9.13e-13!626;UBERON:0000062!5.53e-12!511;UBERON:0002204!1.12e-11!167;UBERON:0000914!3.68e-11!83;UBERON:0002329!3.68e-11!83;UBERON:0003077!3.68e-11!83;UBERON:0003059!3.68e-11!83;UBERON:0007282!3.68e-11!83;UBERON:0009618!3.68e-11!83;UBERON:0007285!3.68e-11!83;UBERON:0000475!4.85e-10!365;UBERON:0004290!4.93e-10!70;UBERON:0000922!6.32e-10!612;UBERON:0002385!6.85e-10!63;UBERON:0001015!6.85e-10!63;UBERON:0000383!6.85e-10!63;UBERON:0007023!8.75e-10!115;UBERON:0002050!1.10e-09!605;UBERON:0005423!1.10e-09!605;UBERON:0001134!1.27e-09!61;UBERON:0002036!1.27e-09!61;UBERON:0003082!1.27e-09!61;UBERON:0000923!2.13e-09!604;UBERON:0005291!2.13e-09!604;UBERON:0006598!2.13e-09!604;UBERON:0002532!2.13e-09!604;UBERON:0000479!1.64e-08!787;UBERON:0000486!3.62e-08!82;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448;UBERON:0005256!1.45e-07!143;UBERON:0001013!7.42e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.64e-07;198!UBERON:0001013;5.27e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.02e-13,167;UBERON:0000926,5.35e-13,315;UBERON:0004120,5.35e-13,315;UBERON:0006603,5.35e-13,315;UBERON:0007524,4.71e-11,73;UBERON:0002329,1.14e-10,71;UBERON:0003059,1.14e-10,71;UBERON:0007282,1.14e-10,71;UBERON:0004290,1.14e-10,71;UBERON:0009618,1.14e-10,71;UBERON:0003077,1.14e-10,72;UBERON:0007285,1.14e-10,72;UBERON:0002385,1.55e-10,64;UBERON:0001015,1.55e-10,64;UBERON:0000383,1.55e-10,64;UBERON:0000923,1.99e-10,560;UBERON:0010316,1.99e-10,560;UBERON:0005291,1.99e-10,560;UBERON:0006598,1.99e-10,560;UBERON:0010317,1.99e-10,560;UBERON:0002532,1.99e-10,560;UBERON:0000479,2.09e-10,773;UBERON:0002050,2.20e-10,564;UBERON:0001134,2.91e-10,62;UBERON:0002036,2.91e-10,62;UBERON:0003082,2.91e-10,62;UBERON:0007023,7.15e-10,114;UBERON:0005256,1.58e-08,122;UBERON:0000486,1.80e-08,83;UBERON:0007503,3.13e-08,78;UBERON:0005423,4.41e-08,581;UBERON:0000922,8.09e-08,592;UBERON:0003104,2.01e-07,160;UBERON:0009142,2.01e-07,160;UBERON:0001013,5.56e-07,14;UBERON:0002384,8.90e-07,371 | |||
|phase1_expression=47.5997353688858,89.7081195103219,56.8046248506764,105.076963270787,147.050200066578,66.297727831628,53.1929744153452,45.4838308867318,181.262825970688,2.21160542851358,6.28021051175185,5.89791704751465,8.70431028153897,16.8322240025663,127.587989655248,25.5483555651675,24.1077811209591,17.527442169297,22.9328415431538,11.0808952269109,26.5200898617529,29.7781985404183,3.43483184557268,1.09499540058307,2.38531015230125,0,0,0,6.68719270643137,6.90892916574983,11.4563931253896,0,1.8072355126695,3.69754010166788,0,0,0,8.86392653651004,19.0517225096635,22.3521196837327,42.5439401055856,27.5309616116133,48.4242067152271,29.2250459946925,25.3176882271502,24.7435742411573,18.8267519893605,17.6802191849385,15.1756121738601,20.1384674625505,13.0641960329841,4.7296445977717,20.3399951634605,16.7826017731795,18.9597081232078,22.7773230846552,19.1034305040492,6.29225756446237,20.8137046812214,10.9115869205872,24.2948107803636,20.7806319117631,12.7656740877844,14.4916415181116,17.412554317715,16.4541715160431,14.3249117268982,20.3511418857962,11.4726242052444,7.60160956467908,16.9511860737343,13.6262725315399,3.48108626184973,2.32380814943136,2.97646019951061,4.19317291016752,5.61643155732475,9.91167492753942,12.8580469357664,2.28010194992999,2.18808344918999,1.82664153764634,0,0,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,0,0,0,0,1.12101712596307,0.263384084775077,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,0.451725357233318,1.15187950038977,0,1.65744076430812,0,0,0,0,216.988111019426,14.75541891348,11.2519054422307,55.6616294672232,62.6672388294862,34.6183180316369,88.276740122672,93.9205299684087,1.41802225746102,1.99556457716308,2.54720878510066,14.9316146067392,0.364295288292542,1.85392221392215,18.499201438317,21.0696982132113,20.8743998014618,0.953962497221368,0,0.371457501329565,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0.732186172644509,0,0.81014194788176,0,0,0,0,0,0,0,0,3.48875241714027,134.679398909431,18.7413157263578,99.1744764291009,402.144942289837,36.8855117486291,24.1091368061192,8.5399196583764,21.4600767122929,22.0959835133834,7.9479296521116,9.15386657435369,127.594311504677,172.852777344,17.5741073875347,36.2105689123172,7.98660550162229,18.6810850689751,3.28816596202542,5.17993421978021,4.21352420106745,28.9898923181948,8.47556789451199,84.2105116582488,180.576434306872,111.517385104629,15.4727431529464,30.181961956282,4.54507507675979,7.63222971218981,14.1302698896933,52.2383368848197,44.4407303908579,122.143541891063,2.26864366320042,107.813171049006,65.9892331449373,49.3801329701779,77.7235938858602,42.8698521631906,154.841964567423,52.4849534855083,104.134996992861,64.2109864012299,121.673079185663,44.6442008415152,197.208189318951,123.543338195782,31.938415138162,17.6343016002907,3.86521706326594,1.63647672354501,1.14721838155602,2.07355300420312,2.12047629314376,1.74290914304278,3.52447587052259,4.03713361401005,1.09493207722749,29.725411142665,48.2430703644664,8.28809528114883,51.0804720835177,44.7565278635143,0.828147600278907,1.34867752062481,0.241011029883482,0.882351781859152,0.435758888184812,1.18635309555548,0.134831308160164,0.392442930250692,1.15424147083917,0,9.81692416624121,24.2828666685526,63.213745895783,84.9258733306267,64.8665963007233,83.301376842078,0,4.30459534900897,3.94605963686609,0.98775256867763,1.1240175325762,0.201057944823262,0.462942225792648,19.5484983186195,42.6373261964627,0,1.62302566965108,44.6153038096122,0,0,0,0,0,46.7812311566055,26.4424819607339,42.9544059014425,0.93733833986777,3.86358894857377,1.41775097242386,0.716468181622786,0.581267877027924,0.766765358330422,0,0,0.829312462163088,0.144119953416961,0.37872730027914,0.761974731506028,4.58386110669933,3.51652341630141,29.0823158238599,1.13110241973656,1.8020583470635,2.5724378936752,11.8858949406082,29.2093246118298,0.7333828582095,21.0712896685178,160.945400633347,7.607724773004,57.442633182332,47.8434209792284,6.68739173081569,2.83698264046557,12.2554202347406,5.57614175266775,59.1457549876673,9.87888404136923,4.23457039581856,6.39705507736582,2.37585561880029,26.225225804184,26.1460037580088,22.2939770335987,27.9734695474738,38.1715389488416,40.058448501776,28.2757329480068,55.1337292003747,179.722500351305,31.4175435468647,42.5335987679294,57.8366911264863,0,0.591092280605782,0.215627574859517,0.256686072559497,2.03275699377971,2.60279707715243,0,0.837581326671744,1.91381625495949,0,0,0,37.5435964660568,16.5056271949693,154.892328532549,78.4050147971143,61.736430123818,90.2057813994106,196.44615294278,95.0989675139592,79.5926264195947,65.1880349142781,15.277188766315,31.3427586520895,25.7175498825525,129.032962767946,247.406408567627,3.3082884179662,11.4328526433867,5.97674323699288,2.72814814301633,14.9791895559447,12.7003923198466,57.5610114139562,174.486263628527,108.615456545599,73.2955933742609,60.381455389871,96.1906448438773,140.997163122741,20.3556795819505,41.0167585473324,29.7300304769989,8.30807086693794,37.303531485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| |||
|short_description=p2@LRP1 | |||
}} |
Revision as of 14:07, 11 January 2014
Short description: | p2@LRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRP1_5end |
Coexpression cluster: | C3304_Fibroblast_Smooth_Pericytes_Cardiac_Mesenchymal_Olfactory_Myoblast |
Association with transcript: | -40bp_to_ENST00000338962_5end |
EntrezGene: | LRP1 |
HGNC: | 6692 |
UniProt: | Q86SW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.32e-18 | 76 |
multi fate stem cell | 1.08e-09 | 427 |
muscle precursor cell | 2.94e-09 | 58 |
myoblast | 2.94e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.94e-09 | 58 |
fat cell | 5.52e-09 | 15 |
somatic stem cell | 1.53e-08 | 433 |
muscle cell | 2.67e-08 | 55 |
skin fibroblast | 6.67e-08 | 23 |
stem cell | 8.51e-08 | 441 |
smooth muscle cell | 6.34e-07 | 43 |
smooth muscle myoblast | 6.34e-07 | 43 |