FFCP PHASE1:Hg19::chr12:66582919..66583077,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17020 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y616,F5GYN6 | |||
|association_with_transcript=0bp_to_ENST00000457197,ENST00000545837,NM_001142523,NM_007199,uc001stg.2,uc001sth.2,uc010ssy.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_IRAK3_5end | |||
|id=chr12:66582919..66583077,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.40e-38!112;CL:0000049!2.40e-38!112;CL:0000766!1.51e-34!76;CL:0000557!1.40e-30!71;CL:0000839!5.56e-29!70;CL:0002009!5.31e-28!65;CL:0002194!1.43e-27!63;CL:0000576!1.43e-27!63;CL:0000040!1.43e-27!63;CL:0000559!1.43e-27!63;CL:0002057!1.49e-27!42;CL:0000860!2.80e-23!45;CL:0000048!9.35e-22!430;CL:0000037!2.52e-20!172;CL:0000566!2.52e-20!172;CL:0000034!4.16e-20!444;CL:0000723!5.62e-20!436;CL:0002032!1.69e-19!165;CL:0000837!1.69e-19!165;CL:0000988!4.60e-19!182;CL:0000134!7.23e-18!358;CL:0002320!6.36e-17!365;CL:0000738!7.98e-15!140;CL:0002031!1.31e-11!124;CL:0000219!2.74e-11!390;CL:0002087!1.81e-10!119;CL:0002393!4.61e-07!9;CL:0002397!4.61e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-20;33!CL:0002057;2.98e-20;33!CL:0000576;6.97e-20;48!CL:0000473;2.46e-19;39!CL:0000234;2.46e-19;39!CL:0000766;8.73e-18;69!CL:0000763;2.71e-14;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.62e-42,108;CL:0000049,4.62e-42,108;CL:0000766,1.50e-38,72;CL:0000557,2.17e-34,67;CL:0000839,1.15e-32,66;CL:0002009,8.80e-32,61;CL:0002194,2.16e-31,59;CL:0000576,2.16e-31,59;CL:0000040,2.16e-31,59;CL:0000559,2.16e-31,59;CL:0000473,9.95e-31,48;CL:0000234,9.95e-31,48;CL:0000860,6.10e-28,42;CL:0002057,6.10e-28,42;CL:0000048,1.60e-23,427;CL:0000037,2.75e-22,168;CL:0000723,1.25e-21,433;CL:0000034,1.60e-21,441;CL:0002032,2.16e-21,161;CL:0000837,2.16e-21,161;CL:0000988,1.04e-20,177;CL:0000134,2.52e-19,354;CL:0002320,4.31e-18,361;CL:0000738,2.28e-16,136;CL:0002031,6.78e-13,120;CL:0000219,1.77e-12,386;CL:0002087,9.85e-12,115;CL:0002393,3.81e-07,9;CL:0002397,3.81e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.04e-20;42!CL:0000049;2.57e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.37e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.76e-30!112;UBERON:0002390!2.19e-30!102;UBERON:0003061!2.19e-30!102;UBERON:0002371!1.74e-26!80;UBERON:0003081!1.31e-24!216;UBERON:0001474!4.94e-23!86;UBERON:0002204!5.62e-22!167;UBERON:0004765!3.32e-19!101;UBERON:0001434!3.32e-19!101;UBERON:0002405!2.12e-18!115;UBERON:0002384!5.46e-16!375;UBERON:0000479!1.34e-12!787;UBERON:0007023!4.84e-10!115;UBERON:0001009!8.18e-10!113;UBERON:0004535!2.88e-09!110;UBERON:0000926!2.59e-08!448;UBERON:0004120!2.59e-08!448;UBERON:0006603!2.59e-08!448;UBERON:0000178!7.14e-07!15;UBERON:0000179!7.14e-07!15;UBERON:0000463!7.14e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.18e-07;15!UBERON:0000179;6.18e-07;15!UBERON:0000463;6.18e-07;15!UBERON:0007100;7.36e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.62e-33,98;UBERON:0003061,1.62e-33,98;UBERON:0002193,1.94e-33,108;UBERON:0002371,8.62e-30,76;UBERON:0003081,6.32e-29,203;UBERON:0002405,2.74e-27,93;UBERON:0001474,5.04e-26,82;UBERON:0000926,7.51e-25,315;UBERON:0004120,7.51e-25,315;UBERON:0006603,7.51e-25,315;UBERON:0002204,2.82e-23,167;UBERON:0004765,1.68e-21,90;UBERON:0001434,1.73e-20,100;UBERON:0002384,3.21e-17,371;UBERON:0000479,8.10e-17,773;UBERON:0007023,3.39e-10,114;UBERON:0001009,1.49e-09,112;UBERON:0004535,5.24e-09,109;UBERON:0000178,5.94e-07,15;UBERON:0000179,5.94e-07,15;UBERON:0000463,5.94e-07,15;UBERON:0000923,7.40e-07,560;UBERON:0010316,7.40e-07,560;UBERON:0005291,7.40e-07,560;UBERON:0006598,7.40e-07,560;UBERON:0010317,7.40e-07,560;UBERON:0002532,7.40e-07,560 | |||
|phase1_expression=20.893013616114,14.7729361484778,28.6137440314821,17.0124607200322,20.5602103436552,13.0850778615055,5.06599756336621,29.0591141776342,22.2007783969863,3.93174298402414,0,2.40285509343189,0,1.73272894144065,2.31978163009541,9.41255205032485,12.0538905604795,12.4152715365853,13.1741855673437,1.10808952269109,0.612002073732759,0,2.57612388417951,1.09499540058307,2.13422487311165,8.32906122652669,7.22485187159523,7.16268109954481,52.7108130977531,60.2612155012624,109.609815307782,3.67768489791571,9.638589400904,5.54631015250181,0,0,51.967277762268,209.41026442505,212.97820321329,192.488642324961,86.4313730566108,90.3663328192953,91.6969020777704,112.829033292942,105.805264232867,106.251818800263,180.364932638811,161.588979992578,180.86852060274,103.856953628296,94.0109792961799,100.26846547276,179.612499663778,198.809282543818,207.202524489343,132.334364698451,133.178201228229,144.721923982635,164.979217987916,170.09238435033,173.899698217339,83.4523789472392,80.3838540215176,63.0812630788387,283.824635378755,333.62251211839,356.877148674464,95.7257414628192,99.0817544998383,89.9161817079183,198.571036863745,289.097944250238,291.461858833055,102.458813861292,131.389457378397,100.426491198512,138.838188097068,150.327069734348,143.206497747098,122.840492552478,121.140256414246,111.973126257721,7.03984977845291,7.64594055766984,9.7846017924991,20.9097809057589,10.4102956629363,11.4950487990897,11.2377628373427,10.494591299889,17.0763890732835,9.39579502993502,13.7618362125082,55.5119580031909,69.5030618097105,45.0386784965382,0.590129310341499,1.17903228824749,0.411202997999018,1.33749196312542,0,0,0,1.6711568532776,0.589211814949674,1.99380505125259,1.35401931882508,1.5370958367081,0.390178042679635,0.328875809207352,0.552700035571697,0.869409257205157,0,0,0,0,0.383220493601921,0,0.253019692019503,2.22995790026868,0,0,9.18508226374414,2.94369205655162,1.24930726552346,6.62976305723247,0,0,0,0.144824403882799,90.2085405361658,59.02167565392,32.0935030227261,22.0477882954585,9.5254203020819,10.4289493651793,19.8821486762775,12.6525066278685,1.32348744029695,0.665188192387692,1.58102614247627,10.6093051153147,0,0,5.51730569212962,5.57215159357655,8.64226743372624,10.9705687180457,6.86393892936153,2.97166001063652,8.54678351676832,6.881876760849,6.2485290289367,9.61023501270816,7.1314904155684,7.15306909044175,5.43386912995707,6.20200222006389,7.82685777910763,7.36385348082274,2.41697590265488,7.60272105718513,6.83373761134875,14.7065232138347,5.67099363517232,8.75137337183982,12.3491154944393,9.79719880204903,4.5994991239765,10.4419222552494,7.14486801328588,333.40445611324,771.682725655167,0.872188104285069,5.4666914686485,7.85109172320394,26.4818361626438,9.17877186396204,7.4480360261655,7.28880880184999,22.417289103238,4.9333509683432,45.7480222037657,37.3148561633036,21.5769712109766,10.1409476522104,12.09969441408,2.34321431833797,11.2377627658915,9.69802096625564,14.1976246524211,11.7434498643765,9.55050371771976,11.3765153428821,24.7026547218421,9.08973948107083,17.0487538940013,21.384051431077,17.0614181202204,4.55080680969013,5.03032699271367,11.1101835209684,10.635074189117,27.7064115484183,0.438977620880838,2.75839016219118,18.629519304418,12.1372435981223,3.7671823494661,2.34913127700424,6.56988893594642,7.50227740211006,7.52283463440604,9.79034052173391,3.7223371266318,6.91982962189192,4.48210223741514,10.8546522924969,6.90374239817245,12.931684545505,1.42003837006646,2.61955455391865,6.44330250779853,1.93260853163297,4.36393792945335,2.58124135850103,0.975789649036763,1.06023814657188,1.39432731443422,0.621966330092223,1.26160425437814,0,28.1609158193669,6.43240938192885,4.14404764057442,19.9678209053751,12.271951188383,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,3.69077727312324,4.20725321410337,19.3439785325758,23.5213938216867,0,0.982827216677626,5.90789906681404,0,0,5.83330555014987,0.109750285408626,0,0.100528972411631,1.01847289674383,3.58389135841357,5.19967392639789,1.44331342025273,0.463721619900307,2.11335649624479,17.0352408358067,16.667478452758,21.1182108980404,0,0,61.3080345157619,29.2505331424047,48.7510212307029,0,0.16798212819886,0.992425680696705,1.16426079513703,0.581267877027924,0.766765358330422,19.2138662779418,14.3518947441558,44.3682167257252,144.984673137463,37.3677602942085,1.71444314588856,4.20187268114105,2.34434894420094,11.9750712215894,2.67351481028641,0.600686115687835,6.28818151787272,4.93376771119587,5.66748089483264,4.76698857836175,2.06834745212444,14.3062578340753,17.751357803676,0,0,5.91576960802927,2.83698264046557,4.26275486425759,33.0279165350321,14.650783345569,13.9950857252731,18.2412263204492,27.7205720019186,11.087326221068,27.4309833124223,2.61460037580088,6.69819040919782,32.8384207731214,48.7189378689163,56.9251636604185,0.718874566474748,0,0,9.70034754672781,12.5340556755734,11.1017797208735,0,7.29013812747131,3.23441362289276,10.5241289749394,0,2.60279707715243,0.773288812777695,1.50764638800914,0,135.5702713344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| |||
|short_description=p1@IRAK3 | |||
}} |
Revision as of 14:28, 11 January 2014
Short description: | p1@IRAK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IRAK3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000457197, ENST00000545837, NM_001142523, NM_007199, uc001stg.2, uc001sth.2, uc010ssy.1_5end |
EntrezGene: | IRAK3 |
HGNC: | 17020 |
UniProt: | Q9Y616F5GYN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.62e-42 | 108 |
common myeloid progenitor | 4.62e-42 | 108 |
myeloid leukocyte | 1.50e-38 | 72 |
granulocyte monocyte progenitor cell | 2.17e-34 | 67 |
myeloid lineage restricted progenitor cell | 1.15e-32 | 66 |
macrophage dendritic cell progenitor | 8.80e-32 | 61 |
monopoietic cell | 2.16e-31 | 59 |
monocyte | 2.16e-31 | 59 |
monoblast | 2.16e-31 | 59 |
promonocyte | 2.16e-31 | 59 |
defensive cell | 9.95e-31 | 48 |
phagocyte | 9.95e-31 | 48 |
classical monocyte | 6.10e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.10e-28 | 42 |
multi fate stem cell | 1.60e-23 | 427 |
hematopoietic stem cell | 2.75e-22 | 168 |
somatic stem cell | 1.25e-21 | 433 |
stem cell | 1.60e-21 | 441 |
hematopoietic oligopotent progenitor cell | 2.16e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-21 | 161 |
hematopoietic cell | 1.04e-20 | 177 |
mesenchymal cell | 2.52e-19 | 354 |
connective tissue cell | 4.31e-18 | 361 |
leukocyte | 2.28e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 6.78e-13 | 120 |
motile cell | 1.77e-12 | 386 |
nongranular leukocyte | 9.85e-12 | 115 |
intermediate monocyte | 3.81e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.62e-33 | 98 |
blood island | 1.62e-33 | 98 |
hemolymphoid system | 1.94e-33 | 108 |
bone marrow | 8.62e-30 | 76 |
lateral plate mesoderm | 6.32e-29 | 203 |
immune system | 2.74e-27 | 93 |
bone element | 5.04e-26 | 82 |
mesoderm | 7.51e-25 | 315 |
mesoderm-derived structure | 7.51e-25 | 315 |
presumptive mesoderm | 7.51e-25 | 315 |
musculoskeletal system | 2.82e-23 | 167 |
skeletal element | 1.68e-21 | 90 |
skeletal system | 1.73e-20 | 100 |
connective tissue | 3.21e-17 | 371 |
tissue | 8.10e-17 | 773 |
adult organism | 3.39e-10 | 114 |
circulatory system | 1.49e-09 | 112 |
cardiovascular system | 5.24e-09 | 109 |
blood | 5.94e-07 | 15 |
haemolymphatic fluid | 5.94e-07 | 15 |
organism substance | 5.94e-07 | 15 |
germ layer | 7.40e-07 | 560 |
germ layer / neural crest | 7.40e-07 | 560 |
embryonic tissue | 7.40e-07 | 560 |
presumptive structure | 7.40e-07 | 560 |
germ layer / neural crest derived structure | 7.40e-07 | 560 |
epiblast (generic) | 7.40e-07 | 560 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.37e-07 | 31 |