FFCP PHASE1:Hg19::chr12:96821204..96821228,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=35bp_to_ENST00000517018_5end | |||
|description=CAGE_peak_1_at_ENST00000517018_5end | |||
|id=chr12:96821204..96821228,- | |||
|ontology_enrichment_celltype=CL:0000055!3.09e-27!180;CL:0000220!2.19e-22!246;CL:0002321!1.10e-21!248;CL:0000222!1.87e-21!119;CL:0000057!2.40e-19!75;CL:0000144!6.67e-17!625;CL:0000548!9.16e-17!679;CL:0000004!9.16e-17!679;CL:0000255!9.16e-17!679;CL:0002371!1.84e-16!591;CL:0000012!4.31e-16!682;CL:0000680!3.12e-15!57;CL:0000056!3.12e-15!57;CL:0000355!3.12e-15!57;CL:0000187!1.39e-14!54;CL:0000183!7.34e-14!59;CL:0000393!1.30e-11!60;CL:0000211!1.30e-11!60;CL:0000192!7.48e-11!42;CL:0000514!7.48e-11!42;CL:0000076!5.39e-10!62;CL:0002139!2.45e-09!24;CL:0002620!4.95e-09!23;CL:0000003!5.04e-09!722;CL:0000359!2.20e-08!32;CL:0000213!9.00e-08!57;CL:0000215!9.00e-08!57;CL:0000071!1.16e-07!18;CL:0002546!1.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.22e-11;24!CL:0000071;7.17e-09;18!CL:0002620;1.94e-08;23!CL:0000057;2.10e-08;73!CL:0000187;9.15e-08;55!CL:0000192;2.39e-07;43!CL:0002494;6.41e-07;16!CL:0000359;8.66e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.16e-20,76;CL:0000222,6.95e-19,121;CL:0002321,3.86e-16,250;CL:0000680,3.67e-13,58;CL:0000056,3.67e-13,58;CL:0000355,3.67e-13,58;CL:0000187,6.37e-13,55;CL:0002139,3.55e-11,24;CL:0000393,2.05e-10,61;CL:0000211,2.05e-10,61;CL:0000076,5.16e-09,63;CL:0000192,6.27e-09,43;CL:0000514,6.27e-09,43;CL:0000071,6.46e-09,18;CL:0002546,6.46e-09,18;CL:0002620,9.67e-09,23;CL:0000213,2.12e-08,58;CL:0000215,2.12e-08,58;CL:0000723,1.40e-07,433;CL:0000115,3.41e-07,36;CL:0000048,3.62e-07,427;CL:0000359,4.81e-07,32;CL:0000034,8.39e-07,441;CL:0002494,9.64e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;7.17e-09;18!CL:0000355;2.36e-07;58!CL:0000514;2.39e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.28e-18!83;UBERON:0002329!1.28e-18!83;UBERON:0003077!1.28e-18!83;UBERON:0003059!1.28e-18!83;UBERON:0007282!1.28e-18!83;UBERON:0009618!1.28e-18!83;UBERON:0007285!1.28e-18!83;UBERON:0002049!1.42e-17!79;UBERON:0007798!1.42e-17!79;UBERON:0000486!1.50e-17!82;UBERON:0000055!2.57e-16!69;UBERON:0000490!1.48e-15!138;UBERON:0003102!1.76e-15!95;UBERON:0004290!3.60e-15!70;UBERON:0004872!3.34e-14!84;UBERON:0001981!3.68e-14!60;UBERON:0007500!3.68e-14!60;UBERON:0004537!3.68e-14!60;UBERON:0006965!3.68e-14!60;UBERON:0001134!7.11e-14!61;UBERON:0002036!7.11e-14!61;UBERON:0003082!7.11e-14!61;UBERON:0004535!2.25e-13!110;UBERON:0002385!3.59e-13!63;UBERON:0001015!3.59e-13!63;UBERON:0000383!3.59e-13!63;UBERON:0001009!5.16e-13!113;UBERON:0001637!2.02e-12!42;UBERON:0003509!2.02e-12!42;UBERON:0004572!2.02e-12!42;UBERON:0005256!3.17e-12!143;UBERON:0000468!2.49e-11!659;UBERON:0000467!5.02e-11!625;UBERON:0000119!5.67e-11!312;UBERON:0000480!7.63e-11!626;UBERON:0000483!1.01e-10!309;UBERON:0003914!2.21e-10!118;UBERON:0000475!2.36e-10!365;UBERON:0004573!3.60e-10!33;UBERON:0004571!3.60e-10!33;UBERON:0002100!1.67e-09!216;UBERON:0002097!6.10e-09!40;UBERON:0003104!2.19e-08!238;UBERON:0009142!2.19e-08!238;UBERON:0002199!2.77e-08!45;UBERON:0002416!2.77e-08!45;UBERON:0000477!5.15e-08!286;UBERON:0001986!1.16e-07!18;UBERON:0004638!1.16e-07!18;UBERON:0004852!1.16e-07!18;UBERON:0000947!1.24e-07!21;UBERON:0010191!1.24e-07!21;UBERON:0000487!2.12e-07!22;UBERON:0006914!4.11e-07!25;UBERON:0000481!8.02e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.76e-10;33!UBERON:0004571;9.76e-10;33!UBERON:0001637;6.82e-09;42!UBERON:0003509;6.82e-09;42!UBERON:0004572;6.82e-09;42!UBERON:0004638;7.17e-09;18!UBERON:0001986;7.17e-09;18!UBERON:0004852;7.17e-09;18!UBERON:0000055;1.01e-08;65!UBERON:0007500;4.19e-08;56!UBERON:0001981;4.19e-08;56!UBERON:0004537;4.19e-08;56!UBERON:0000487;4.57e-08;22!UBERON:0006914;4.58e-08;25!UBERON:0000947;2.90e-07;21!UBERON:0010191;2.90e-07;21!UBERON:0002097;8.56e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.73e-17,68;UBERON:0000490,4.34e-16,148;UBERON:0002049,5.28e-16,78;UBERON:0007798,5.28e-16,78;UBERON:0004872,3.35e-15,83;UBERON:0000486,9.39e-15,83;UBERON:0004535,3.13e-14,109;UBERON:0007500,3.86e-14,59;UBERON:0001981,3.86e-14,59;UBERON:0004537,3.86e-14,59;UBERON:0006965,3.86e-14,59;UBERON:0001009,2.59e-13,112;UBERON:0003102,2.75e-13,99;UBERON:0002329,2.20e-12,71;UBERON:0003059,2.20e-12,71;UBERON:0007282,2.20e-12,71;UBERON:0004290,2.20e-12,71;UBERON:0009618,2.20e-12,71;UBERON:0007524,2.31e-12,73;UBERON:0003077,5.21e-12,72;UBERON:0007285,5.21e-12,72;UBERON:0001637,5.42e-12,42;UBERON:0003509,5.42e-12,42;UBERON:0004572,5.42e-12,42;UBERON:0001134,1.85e-11,62;UBERON:0002036,1.85e-11,62;UBERON:0003082,1.85e-11,62;UBERON:0007503,5.12e-11,78;UBERON:0002385,1.06e-10,64;UBERON:0001015,1.06e-10,64;UBERON:0000383,1.06e-10,64;UBERON:0003914,1.11e-10,117;UBERON:0004573,2.96e-10,33;UBERON:0004571,2.96e-10,33;UBERON:0002097,1.54e-09,41;UBERON:0004638,6.46e-09,18;UBERON:0001986,6.46e-09,18;UBERON:0004852,6.46e-09,18;UBERON:0005256,1.10e-08,122;UBERON:0000483,1.51e-08,306;UBERON:0000119,1.94e-08,309;UBERON:0000487,3.47e-08,22;UBERON:0006914,3.95e-08,25;UBERON:0000926,1.23e-07,315;UBERON:0004120,1.23e-07,315;UBERON:0006603,1.23e-07,315;UBERON:0002199,1.49e-07,46;UBERON:0002416,1.49e-07,46;UBERON:0000947,3.07e-07,21;UBERON:0010191,3.07e-07,21;UBERON:0003104,5.77e-07,160;UBERON:0009142,5.77e-07,160 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0.261185628199839,1.47440361900905,0,0,0.263766978228454,1.8564952944007,4.63956326019082,0.672325146451775,3.01347264011988,2.92124036154949,3.41552959153355,1.10808952269109,0,0.313454721478088,0,0.684372125364421,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,6.65557218300218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,2.58923153089935,3.84241059793651,2.83778675866302,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,1.99463657621632,1.27867425159808,0,0.56738522469114,0,1.7587406567972,1.5644487552606,2.82345498116652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.767175371061182,0.361439152384566,0.50133791063589,0.579386075843295,0,0.973269740605272,0.661743720148475,0.443458794925128,0.263504357079378,0.392937226493138,0.728590576585084,0.370784442784429,0,0,0,0,0,0,2.58391129576717,2.58070378531837,2.08284300964557,5.08777147731609,0.838998872419812,1.37559020970034,1.67195973229448,1.55050055501597,2.49036383880697,3.01248551488203,2.01414658554573,1.52054421143703,2.19655851793353,1.47065232138347,1.62028389576352,2.32179293538607,3.14341121676638,2.81528701208306,1.53316637465883,3.79706263827252,2.01521918323448,0,0,0.436094052142534,1.49091585508596,2.15271869829786,19.4641495795432,8.03142538096678,1.41867352879343,0,3.20246987189115,2.4666754841716,1.24484414159907,5.92726957106628,3.75962377160955,0.908144565869588,1.15235184896,8.66989297785048,0.624320153660641,1.71141546463335,0.896692083310806,3.40560046066918,1.61872944368132,1.40450806702248,6.1246251376468,1.84251475967652,5.06296327761251,3.56400857184616,4.45080472701402,2.73048408581408,6.46756327634615,1.68336113954066,2.62748891731125,2.21651292387346,1.31693286264251,1.22595118319608,2.25357088359895,3.62982986112067,3.58779271377724,4.05759038755278,1.69545520927649,3.30100205692843,1.75189299705346,8.24449728146013,2.60563598864226,1.5189869901714,0.487185025805993,5.3011092591264,3.12969655383818,1.77810662500693,5.32514388774922,1.20902517873168,0.67824236924195,1.15956511897978,2.45471508531751,1.14721838155602,0,0,0,0,0,0,1.56449532329816,1.28648187638577,0,4.64367928031979,3.60939740834793,0.236613600079688,0.337169380156203,0,0.330881918197182,0.435758888184812,0.237270619111097,0.943819157121151,0.784885860501384,1.15424147083917,0,0,1.2347220339942,0,0,0,1.18157981336281,0,0,0.514703430895577,1.75600456653801,3.37205259772859,2.71428225511403,0.833296006426766,7.49359102213747,1.03993478527958,1.44331342025273,0.695582429850461,0.821860859650752,1.44366447761074,1.38895653772983,1.14152491340759,0,0,0,0,0,0.93733833986777,1.84780341018745,0.992425680696705,2.7763142037883,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0,0.37872730027914,0.317489471460845,0.763976851116555,0,3.4214489204541,0.102827492703324,0.901029173531752,0.285826432630578,1.00917975910825,0.43596006883328,0.51336800074665,2.32689088364,14.3062578340753,0,1.06375246633948,0,0.771622122786426,0,1.0656887160644,1.85871391755592,1.08524321078289,0,1.30294473717494,3.19852753868291,3.16780749173372,2.41151501647669,1.74306691720059,3.69900067373611,0,0,0,0.479249710983165,4.59447743336456,1.42636905040718,1.88215698667853,1.43833425785268,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.49076596687656,2.00068208423871,1.35632511849868,0.415941723061614,0.535286966391485,0.630809660135739,1.52283839490527,0.902838299183157,0,0,0.664225598535437,0.553107505625109,1.73767228936166,0.587403472388222,2.74514739048685,0,0,0,0,0,0,0.992431231275107,1.99500565274481,1.12264037773229,1.02511319404561,1.53512174720011,0.804269605718038,0,0.462629081407967,0.355123450626254,0.739144404124282,0,0.232420756919918,0,6.01519410909855,6.53775021444864,2.75554675595056,2.54927635209404,3.01586154406675,0,1.00119938235739,0,0,0.949964660035881,1.13733384070897,1.02056223165909,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.512900250232778,0,0,0.103041011647722,0,0.165018999841176,0.574265537996172,3.90036147621913,1.6068392984416,1.7400729292582,1.54048617114644,2.14905144616581,1.24052915236078,4.83391101907231,2.75531718437034,1.19317278382541,1.78064071293475,6.61139661443912,4.80475168412765,17.7381670367472,1.4162089319777,5.11330104227014,7.24068397710472,0.6970372701606,1.23213432070436,0.532306030317022,0.869932992075073,2.7798632865588,3.00562262158182,0,1.2655176988749,3.24071329670502,1.02359116524534,1.28381696410176,2.54562598340749,2.35484592059769,0.899362287916574,2.47083326762449,2.82749765629647,1.2130948894399,1.58510321173008,0.842516912477962,3.41343617362713,1.94970791705028,1.05650146756755,0.682499557039929,2.12108147930569,1.13008116620243,0,1.99031692572366,2.19225442626881,2.31510213706675,1.9676842561399,1.62328301570163,0.61964699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| |||
|short_description=p1@ENST00000517018 | |||
}} |
Revision as of 15:21, 11 January 2014
Short description: | p1@ENST00000517018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000517018_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000517018_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.16e-20 | 76 |
mesodermal cell | 6.95e-19 | 121 |
embryonic cell | 3.86e-16 | 250 |
muscle precursor cell | 3.67e-13 | 58 |
myoblast | 3.67e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.67e-13 | 58 |
muscle cell | 6.37e-13 | 55 |
endothelial cell of vascular tree | 3.55e-11 | 24 |
electrically responsive cell | 2.05e-10 | 61 |
electrically active cell | 2.05e-10 | 61 |
squamous epithelial cell | 5.16e-09 | 63 |
smooth muscle cell | 6.27e-09 | 43 |
smooth muscle myoblast | 6.27e-09 | 43 |
blood vessel endothelial cell | 6.46e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.46e-09 | 18 |
skin fibroblast | 9.67e-09 | 23 |
lining cell | 2.12e-08 | 58 |
barrier cell | 2.12e-08 | 58 |
somatic stem cell | 1.40e-07 | 433 |
endothelial cell | 3.41e-07 | 36 |
multi fate stem cell | 3.62e-07 | 427 |
vascular associated smooth muscle cell | 4.81e-07 | 32 |
stem cell | 8.39e-07 | 441 |
cardiocyte | 9.64e-07 | 16 |