FFCP PHASE1:Hg19::chr12:122688247..122688284,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79369 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15683 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000545141_5end | |||
|description=CAGE_peak_1_at_B3GNT4_5end | |||
|id=chr12:122688247..122688284,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.32e-17!254;CL:0002076!3.00e-14!43;CL:0000223!1.68e-10!59;CL:0002368!2.11e-07!13;CL:0002159!4.34e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.95e-13;42!CL:0002368;4.93e-12;13!CL:0002159;8.62e-09;14!CL:0002202;4.19e-07;9!CL:0002632;4.19e-07;9!CL:0000240;9.41e-07;6!CL:0000311;9.41e-07;6!CL:0000079;9.41e-07;6!CL:0000237;9.41e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.74e-17,42;CL:0002368,4.55e-12,13;CL:0000223,4.45e-10,58;CL:0002159,6.12e-09,14;CL:0000066,1.40e-08,253;CL:0002202,4.20e-07,9;CL:0002632,4.20e-07,9;CL:0000240,8.16e-07,6;CL:0000311,8.16e-07,6;CL:0000079,8.16e-07,6;CL:0000237,8.16e-07,6;CL:0000036,8.16e-07,6;CL:0000357,8.16e-07,6;CL:0000114,8.16e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;9.41e-07;6!CL:0000114;9.41e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!5.38e-17!143;DOID:305!1.13e-14!106;DOID:162!9.56e-09!235;DOID:299!4.93e-08!25;DOID:14566!6.29e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.38e-23!82;UBERON:0005743!1.42e-22!86;UBERON:0000073!2.02e-21!94;UBERON:0001016!2.02e-21!94;UBERON:0000955!6.82e-20!69;UBERON:0006238!6.82e-20!69;UBERON:0001049!1.05e-19!57;UBERON:0005068!1.05e-19!57;UBERON:0006241!1.05e-19!57;UBERON:0007135!1.05e-19!57;UBERON:0001869!1.53e-17!32;UBERON:0000924!3.11e-17!173;UBERON:0006601!3.11e-17!173;UBERON:0004121!5.12e-17!169;UBERON:0001893!7.65e-17!34;UBERON:0002020!1.15e-16!34;UBERON:0003528!1.15e-16!34;UBERON:0002619!1.26e-16!22;UBERON:0002791!3.88e-16!33;UBERON:0002616!8.91e-16!59;UBERON:0002780!1.77e-15!41;UBERON:0001890!1.77e-15!41;UBERON:0006240!1.77e-15!41;UBERON:0001950!3.31e-15!20;UBERON:0000033!4.93e-15!123;UBERON:0003080!9.33e-15!42;UBERON:0002346!1.62e-14!90;UBERON:0003075!1.93e-14!86;UBERON:0007284!1.93e-14!86;UBERON:0000956!3.07e-14!25;UBERON:0000203!3.07e-14!25;UBERON:0000153!4.54e-13!129;UBERON:0007811!4.54e-13!129;UBERON:0003056!4.04e-11!61;UBERON:0000064!6.17e-11!219;UBERON:0000475!1.07e-09!365;UBERON:0000481!1.34e-07!347;UBERON:0007023!1.63e-07!115;UBERON:0000922!5.40e-07!612;UBERON:0000062!9.91e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.46e-31;22!UBERON:0001950;2.83e-28;20!UBERON:0000956;1.35e-26;25!UBERON:0000203;1.35e-26;25!UBERON:0001869;5.88e-25;32!UBERON:0002791;5.19e-23;32!UBERON:0001893;1.62e-22;34!UBERON:0003528;1.67e-22;34!UBERON:0002020;1.67e-22;34!UBERON:0002780;9.25e-16;41!UBERON:0001890;9.25e-16;41!UBERON:0000073;1.89e-14;53!UBERON:0002616;1.89e-14;53!UBERON:0000955;1.14e-12;68!UBERON:0001017;1.42e-10;75!UBERON:0000200;1.66e-10;6!UBERON:0001871;6.18e-09;6!UBERON:0000349;7.39e-09;5!UBERON:0001016;7.68e-09;83!UBERON:0002021;1.15e-08;5!UBERON:0001872;3.82e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.30e-31,22;UBERON:0001950,1.31e-28,20;UBERON:0001869,1.80e-28,32;UBERON:0000956,7.61e-27,25;UBERON:0000203,7.61e-27,25;UBERON:0001017,1.29e-26,81;UBERON:0001893,2.55e-26,34;UBERON:0002791,4.99e-26,32;UBERON:0003528,4.99e-26,34;UBERON:0002020,4.99e-26,34;UBERON:0001016,3.18e-25,89;UBERON:0000955,1.09e-24,68;UBERON:0006238,1.09e-24,68;UBERON:0000073,1.53e-24,53;UBERON:0002616,1.53e-24,53;UBERON:0001049,1.15e-22,56;UBERON:0005068,1.15e-22,56;UBERON:0006241,1.15e-22,56;UBERON:0007135,1.15e-22,56;UBERON:0002780,5.42e-22,41;UBERON:0001890,5.42e-22,41;UBERON:0003080,5.42e-22,41;UBERON:0006240,5.42e-22,41;UBERON:0004121,4.74e-17,171;UBERON:0000924,4.74e-17,171;UBERON:0006601,4.74e-17,171;UBERON:0010371,3.92e-16,104;UBERON:0003056,2.91e-14,61;UBERON:0003075,3.43e-14,82;UBERON:0007284,3.43e-14,82;UBERON:0011216,6.48e-14,223;UBERON:0002346,4.68e-13,86;UBERON:0000200,1.71e-10,6;UBERON:0001871,5.80e-09,6;UBERON:0000349,6.89e-09,5;UBERON:0002021,1.08e-08,5;UBERON:0001872,2.47e-08,5;UBERON:0010314,4.85e-08,132;UBERON:0007023,4.33e-07,114;UBERON:0000922,6.21e-07,592 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.22866968250754,2.09340350391728,0.436882744260345,1.05506791291381,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,1.83884244895785,3.0120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0.639312809217652,0,0,0.144846518960824,0,0,0,0,0.175669571386252,1.5062593682237,1.45718115317017,1.85392221392215,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,5.66922267785295,0,0,0,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0.125118519871964,0,0,0,0,0.567160915800105,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,1.63647672354501,1.43402297694502,1.46368447355514,0.662648841607426,1.04574548582567,0.932949495138334,1.7662459561294,0.72995471815166,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.330881918197182,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0.686271241194102,3.84125998930189,2.24803506515239,0.402115889646523,1.75918045801206,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,2.57545848628462,0,0,0,1.87467667973554,2.01578553838631,1.55952606966625,0.358234090811393,0.871901815541886,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0,0,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0.128343036279748,0,1.30139853857622,3.09315525111078,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0.106727557803444,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0.483437798366489,4.61164881697555,1.47329582297434,0,0,0,0,1.30926073077505,0.784349769176855,0,1.05551628892876,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0.656029291399411,0,0,0.0915694648183434,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0.290033387828457,0.0852266274161009,0,3.14041339185858,2.69066094311149,2.55225424989168,3.6416801107998,0.464845549297286,1.5740617341532,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0.491245205065606,0,0,0,0,0,0,0.288666338176536,2.68120910214315,3.26672954583968,0.0941438007767792,2.58303223602738,5.05414427002877,0,0.459446800413919,0,0,0,0,0,0,0,0.79312517629427,1.38871292465715,0,3.67560323971548,0,0,0,0.637705090915289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,1.21360521749513,0,0,0.71623345421307,0,1.84296421259539,9.94147647766298,3.79807424308384,0.445234820091624,0,0,0,0,4.28285671352269,0.920418142519393,0.246169610922139,0,0.449341755736634,0.358042349351218,0,0.197286811273867,0,0,4.84666373047609,3.33965153382665,7.98455192004777,0,0,0,3.18621655199399,1.77977555204936,1.41832609060762,1.03423011972439,1.45802306691627,0,0.885741385813839,2.53252521113357,4.5774520895125,9.39923709415409,8.57088094965288,2.19385397153973,0.544692317594951,0.139423744278603,0.0769502585037971,0.91153644677601,0.23056390438806,0,0.108647371922008,0.957003479195758,0.274792780205587,0,0,0,0,3.60953056987489,2.35275041181287,1.84603745673427,0,0,1.05499032264014,1.30586246527318,1.13082457147153,1.94749775767882,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,1.1713222286267,0,0.782658475728359,0.485560759068186,0,0,4.59109142445735,0,0.150323419414493,0.518440956986236,1.32930774541437,2.31694369112849,0.627865836814451,1.19472429772959,1.99226682220855,0.832048038078832,3.12407529003236,1.07791637155815,1.48000651186684,0,0,0,0,0,0.193978032976839,2.38291542067051,0.225980740780532,0.274083849293502,0.19871461170299,3.98858014522036,0.195551382734803,0.881747022766871,0,0.599428828746391,0.576361668616424,0.687219576995494,0.171594997861965,0,0.248505071130865,0.707082103850386,1.08723364858891,0.941425616810999,0.305994652908965,1.73370353940911,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0.164831716762333,0,0.0984274815147488,0,4.77137813885582,2.04305109167363,1.44677833618517,2.06309154895851,1.66176135211674,0.2249738915515,0,3.82722206945555,1.34173875039706,1.81253126788156,1.52118305591495,0.316801009558219,0.179287339332845,1.91915197319445,0,0,1.77987976358325,0,0,0,0,0,0.340776043570843,0.453248366080503,0,0,0.517131825446202,1.58679122091228,0.513260513652988,0.704815022316672,0,0,0.414239055347196,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0.157054096250234,4.43034089983493,5.73523445039227,4.13130071331449,1.14681839138014,0.443716206147409,0.993542447062135,0,1.12482367165896,0,0,0,7.96169339871699,3.04334160082733,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0.308801447160972,2.19284049578707,0.176689145945881,0.192914038270915,0.168942440653073,2.56241518587947,0,0,3.17994403148981,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0,0,0,0,0.184105950251841,0.979156554036111,1.24415452006595,2.04630994085843,0.323474434190045,0,0.54604819096007,0.169732529954025,0,0.123935764259002,2.23457967189298,0,0,0.80057074828547,0,0,3.66106583049819,2.8339315265117,2.71377560397157,3.07674546361133,7.56215088665154,4.01112064292464,4.03689114079628,0,1.17777262201231,3.65706142377995,0,0.808679663052368,0,0.690359926060101,0,0.0752103283492573,10.488663572583,0.781514011233092,0.261906694481422,0,0.887136517302272,3.57949198477492,3.90539049306924,4.13373593002368,2.53663240775627,1.64092442705466,0,0,0.879356221798103,1.14986184875636,0.535701835878287,0,0,0.682986574053893,0.177404740325278,0,0,2.44691038716594,3.7490480930824,1.06374456795571,0.556157009460346,0.156986185701028,2.82808061848803,0.280272163313789,0,5.39818978046554,22.9320810185784,0.643288897589907,0.632054446930906,0.348724276104376,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0.22910686854405,2.79185747097888,1.91107787795487,1.00669888618013,0.098150233615243,0.121917924982269,0,0,0,0,4.44484980578001,1.19370465096821,0.237840181555137,0.22589216407792,0.329821550236287,1.20770274853339,0.154348316215889,0,0.940634592723046,0,0.471353094203252,0.588925401344836,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,1.60698544745092,0.352894871715692,0,0,0,0,0.631086248772738,3.33158301935482,4.79985759374415,0.5290268405154,0,0,0,0.378499274505237,0.655593431782173,0.380095503034311,0.61193297845189,0,0,5.51556586443225,0.682008283964155,0.267964130156178,0,0.20686599172379,0,0,0,0,0,0.12729431655633,0,0.435433495793923,0.342233301085281,0.26940821205835,0.358611026963382,0.332660356546013,1.22104902916462,0.106727345877715,1.9307228228694,0.0898252021065869,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@B3GNT4 | |||
}} |
Revision as of 16:26, 11 January 2014
Short description: | p1@B3GNT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B3GNT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000545141_5end |
EntrezGene: | B3GNT4 |
HGNC: | 15683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.74e-17 | 42 |
respiratory epithelial cell | 4.55e-12 | 13 |
endodermal cell | 4.45e-10 | 58 |
general ecto-epithelial cell | 6.12e-09 | 14 |
epithelial cell | 1.40e-08 | 253 |
epithelial cell of tracheobronchial tree | 4.20e-07 | 9 |
epithelial cell of lower respiratory tract | 4.20e-07 | 9 |
stratified squamous epithelial cell | 8.16e-07 | 6 |
keratin accumulating cell | 8.16e-07 | 6 |
stratified epithelial cell | 8.16e-07 | 6 |
keratinizing barrier epithelial cell | 8.16e-07 | 6 |
epithelial fate stem cell | 8.16e-07 | 6 |
stratified epithelial stem cell | 8.16e-07 | 6 |
surface ectodermal cell | 8.16e-07 | 6 |