FFCP PHASE1:Hg19::chr14:91711016..91711081,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4519 | |||
|TSSclassifier=weak | |||
|UniProt=E9PNU7,A1A5B2,Q15743 | |||
|association_with_transcript=-164bp_to_ENST00000529102,ENST00000535815,NM_001177676,uc001xzg.2_5end | |||
|description=CAGE_peak_1_at_GPR68_5end | |||
|id=chr14:91711016..91711081,- | |||
|ontology_enrichment_celltype=CL:0000048!1.53e-14!430;CL:0000723!2.48e-14!436;CL:0000359!6.23e-14!32;CL:0000055!6.99e-14!180;CL:0000034!3.37e-13!444;CL:0000192!4.68e-13!42;CL:0000514!4.68e-13!42;CL:0000680!5.87e-12!57;CL:0000056!5.87e-12!57;CL:0000355!5.87e-12!57;CL:0002009!9.27e-11!65;CL:0000187!1.32e-10!54;CL:0002194!9.21e-10!63;CL:0000576!9.21e-10!63;CL:0000040!9.21e-10!63;CL:0000559!9.21e-10!63;CL:0000183!2.04e-09!59;CL:0000557!1.31e-08!71;CL:0002057!2.08e-08!42;CL:0000057!2.12e-08!75;CL:0000393!3.05e-08!60;CL:0000211!3.05e-08!60;CL:0000839!2.16e-07!70;CL:0002334!4.82e-07!12;CL:0000860!5.22e-07!45;CL:0002371!6.53e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.59e-18;39!CL:0000234;2.59e-18;39!CL:0000860;5.60e-17;33!CL:0002057;5.60e-17;33!CL:0000359;8.91e-15;32!CL:0000192;1.25e-08;43!CL:0002539;1.82e-08;10!CL:0002334;6.70e-08;12!CL:0000235;3.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.64e-21,427;CL:0000723,1.02e-20,433;CL:0000034,2.22e-19,441;CL:0000473,8.29e-17,48;CL:0000234,8.29e-17,48;CL:0002009,9.76e-16,61;CL:0000359,1.12e-15,32;CL:0002194,2.78e-14,59;CL:0000576,2.78e-14,59;CL:0000040,2.78e-14,59;CL:0000559,2.78e-14,59;CL:0000557,4.50e-13,67;CL:0000860,3.26e-12,42;CL:0002057,3.26e-12,42;CL:0000192,1.01e-11,43;CL:0000514,1.01e-11,43;CL:0000839,2.14e-11,66;CL:0000134,2.15e-11,354;CL:0002320,1.73e-10,361;CL:0000680,3.48e-10,58;CL:0000056,3.48e-10,58;CL:0000355,3.48e-10,58;CL:0000766,1.97e-09,72;CL:0000187,1.22e-08,55;CL:0002539,1.74e-08,10;CL:0002334,5.31e-08,12;CL:0000057,8.30e-08,76;CL:0000219,1.82e-07,386;CL:0000235,3.52e-07,6;CL:0000393,7.07e-07,61;CL:0000211,7.07e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-09;42!CL:0000514;1.25e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!6.24e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.43e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.93e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.00e-22!167;UBERON:0000914!5.71e-14!83;UBERON:0002329!5.71e-14!83;UBERON:0003077!5.71e-14!83;UBERON:0003059!5.71e-14!83;UBERON:0007282!5.71e-14!83;UBERON:0009618!5.71e-14!83;UBERON:0007285!5.71e-14!83;UBERON:0000486!1.95e-13!82;UBERON:0000480!2.70e-12!626;UBERON:0000467!3.13e-12!625;UBERON:0004290!1.17e-11!70;UBERON:0000468!4.06e-11!659;UBERON:0004765!2.33e-10!101;UBERON:0001434!2.33e-10!101;UBERON:0002385!2.76e-10!63;UBERON:0001015!2.76e-10!63;UBERON:0000383!2.76e-10!63;UBERON:0001134!5.92e-10!61;UBERON:0002036!5.92e-10!61;UBERON:0003082!5.92e-10!61;UBERON:0001637!6.56e-10!42;UBERON:0003509!6.56e-10!42;UBERON:0004572!6.56e-10!42;UBERON:0004573!1.33e-09!33;UBERON:0004571!1.33e-09!33;UBERON:0002371!1.65e-08!80;UBERON:0000923!4.50e-08!604;UBERON:0005291!4.50e-08!604;UBERON:0006598!4.50e-08!604;UBERON:0002532!4.50e-08!604;UBERON:0001474!5.21e-08!86;UBERON:0002050!6.31e-08!605;UBERON:0005423!6.31e-08!605;UBERON:0000479!1.81e-07!787;UBERON:0000926!2.32e-07!448;UBERON:0004120!2.32e-07!448;UBERON:0006603!2.32e-07!448;UBERON:0000055!2.97e-07!69;UBERON:0000922!4.28e-07!612;UBERON:0001135!4.41e-07!15;UBERON:0003081!6.14e-07!216;UBERON:0001981!7.72e-07!60;UBERON:0007500!7.72e-07!60;UBERON:0004537!7.72e-07!60;UBERON:0006965!7.72e-07!60;UBERON:0000475!9.27e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.29e-11;33!UBERON:0004571;7.29e-11;33!UBERON:0004237;1.82e-08;10!UBERON:0004695;1.82e-08;10!UBERON:0002111;1.82e-08;10!UBERON:0004178;1.82e-08;10!UBERON:0001637;3.23e-08;42!UBERON:0003509;3.23e-08;42!UBERON:0004572;3.23e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.18e-24,167;UBERON:0000926,1.93e-14,315;UBERON:0004120,1.93e-14,315;UBERON:0006603,1.93e-14,315;UBERON:0001434,1.69e-13,100;UBERON:0000486,6.60e-13,83;UBERON:0002371,1.41e-12,76;UBERON:0001637,1.96e-12,42;UBERON:0003509,1.96e-12,42;UBERON:0004572,1.96e-12,42;UBERON:0004573,5.44e-12,33;UBERON:0004571,5.44e-12,33;UBERON:0001474,5.90e-12,82;UBERON:0004765,9.49e-12,90;UBERON:0002405,1.32e-11,93;UBERON:0002384,5.88e-11,371;UBERON:0003081,1.16e-10,203;UBERON:0007524,1.56e-10,73;UBERON:0003077,2.59e-10,72;UBERON:0007285,2.59e-10,72;UBERON:0002329,6.06e-10,71;UBERON:0003059,6.06e-10,71;UBERON:0007282,6.06e-10,71;UBERON:0004290,6.06e-10,71;UBERON:0009618,6.06e-10,71;UBERON:0002385,7.34e-09,64;UBERON:0001015,7.34e-09,64;UBERON:0000383,7.34e-09,64;UBERON:0001134,7.87e-09,62;UBERON:0002036,7.87e-09,62;UBERON:0003082,7.87e-09,62;UBERON:0004237,1.74e-08,10;UBERON:0004695,1.74e-08,10;UBERON:0002111,1.74e-08,10;UBERON:0004178,1.74e-08,10;UBERON:0007503,1.95e-08,78;UBERON:0002193,5.78e-08,108;UBERON:0000055,3.83e-07,68;UBERON:0002050,5.99e-07,564;UBERON:0002390,8.12e-07,98;UBERON:0003061,8.12e-07,98;UBERON:0007500,9.83e-07,59;UBERON:0001981,9.83e-07,59;UBERON:0004537,9.83e-07,59;UBERON:0006965,9.83e-07,59 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.55049844505568,4.00293193412522,0.893922188854576,0,0,6.31719873426831,0,0.245733936501509,0,0,0,0.247532705920093,0,6.72325146451775,4.82155622419182,7.30310090387373,5.85519358548608,0,0,0,0,0,0.251085279189606,0.0764134057479513,0.0821005894499457,0,0.786728553697808,0,0.928896739896456,1.83884244895785,1.8072355126695,0.739508020333575,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.647787332037959,0.257575567634187,3.78035420826868,4.1566353805769,7.76268995801012,5.57829688573643,8.22335776043652,4.64559556342655,6.32923263108731,9.73410684810582,11.5876292645407,1.03423704220986,1.93645405075148,2.70852973188684,3.76484679085209,4.63940455098338,8.53949240891322,3.67300670845083,3.85114832491312,1.27867425159808,4.94776950280074,10.3721101963249,10.2293940127847,4.64334781805734,3.40431134814684,3.11411124497787,5.02497330513487,9.38669253156363,6.5156653411535,4.23779651843358,6.62899744777616,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0.657751618414705,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0,0,0,0,3.61439152384566,7.01873074890245,2.17269778441236,25.4491503056352,44.7704080678425,0,0.221729397462564,0.087834785693126,0.785874452986276,0.728590576585084,0,15.2537275017701,10.9701734498538,17.2845348674525,0,0,0,0,0,0,0,0.838998872419812,0,0,1.8089173141853,2.84613010149368,2.34304428935269,2.01414658554573,0,0.488124115096339,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,1.3082821564276,5.96366342034382,1.51956613997496,3.31022952033047,3.15520282823695,0.354668382198357,0.560677600142307,1.06748995729705,1.72667283892012,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,3.43376084513353,0.570471821544449,7.02408798593465,0.469737994575059,0,0.280901613404497,0.61246251376468,1.35117749042945,0.206651562351531,8.31602000097437,1.7308685049499,0,1.43723628363248,0.673344455816265,0.250237039743928,1.10825646193673,1.75591048352335,1.5324389789951,3.60571341375832,0,2.33206526395521,1.2813443329114,2.11931901159562,3.90118424909723,1.54578793857658,1.28820270022815,2.04728541964749,3.71307930930786,2.14361411354637,1.26216887122057,1.19664868234989,0.161646056818812,1.42003837006646,0.806016785821122,0.508681776931463,8.11695583285847,7.36414525595254,5.44928731239107,0,0,0.116193942869518,0,0,0,12.5159625863853,2.57296375277154,5.52539685409922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.658501712451753,1.1240175325762,0,0.370353780634118,0,0,0,0.115930404975077,0.117408694235822,1.29929802984966,0,0.190254152234598,0,0,8.12516120088411,41.4187549296451,22.2946743433092,1.87467667973554,8.39910640994298,5.10390350072591,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0,8.14411809274,0,0,0,0,0.257207374262142,0,0.799266537048298,0,0,0,2.28015329005615,0,3.95975936466715,0.602878754119172,6.97226766880235,0.499864955910285,9.72990245129524,5.52482800575339,18.9750545534728,3.35474797688216,0,9.98458335285029,3.90909528002464,6.1642896765115,8.0577433457953,0.224170287987055,0,0.431255149719035,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0,0.234282829985426,2.10662269809403,6.82222512167955,1.03473071292505,1.32845119707087,4.60922921354258,2.78027566297865,0,0,0,0,0.320182673410333,0,0,0,2.97729369382532,0.920771839728375,1.40330047216537,2.30650468660262,4.09365799253363,8.36440389946759,2.96836132889982,7.09364591492216,19.531789784444,5.4203922969114,12.9813607295905,10.8075651967762,0,7.01772646061497,0.0920809889358963,1.60740227430449,5.46273504020151,2.36023946926963,0,0,0.784349769176855,0,0.422206515571503,0,0.680374821106063,0.215915916102139,0,0,1.00337954770971,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0,0.309123034943167,0,0,3.44559322797703,1.95018073810956,0,2.22342652071881,0.154048617114644,0,0.551346289938122,0.107420244868274,0,0.340906509664404,0.534192213880424,1.15699440752685,0.960950336825531,1.40373983744043,0.6069466851333,1.39453664789186,9.12955805808856,18.8200062943362,1.23213432070436,5.85536633348724,13.9189278732012,10.3781562698195,3.2918723950658,0,0.316379424718726,0.571890581771475,0,0,7.95508119814842,12.5591782431877,2.33834194858309,0.54907405947211,0.942499218765491,3.03273722359974,1.58510321173008,8.00391066854064,0.48763373908959,13.6479554193519,5.28250733783777,0.409499734223957,2.2624869112594,1.13008116620243,3.30819206127675,19.2397302819954,17.9764862954043,1.15755106853338,0,11.9717122407995,4.64735247149625,1.97186921772569,0.430234056612155,0.687743287091848,9.98678944147501,0.354761064070598,11.6109199413715,3.62224382255892,0,0,1.05844323998063,2.01090682660736,3.26672954583968,0.282431402330337,9.90162357143829,0,6.65145230305014,6.6619786060018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| |||
|short_description=p1@GPR68 | |||
}} |
Revision as of 21:30, 11 January 2014
Short description: | p1@GPR68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR68_5end |
Coexpression cluster: | NA |
Association with transcript: | -164bp_to_ENST00000529102, ENST00000535815, NM_001177676, uc001xzg.2_5end |
EntrezGene: | GPR68 |
HGNC: | 4519 |
UniProt: | E9PNU7A1A5B2Q15743 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.64e-21 | 427 |
somatic stem cell | 1.02e-20 | 433 |
stem cell | 2.22e-19 | 441 |
defensive cell | 8.29e-17 | 48 |
phagocyte | 8.29e-17 | 48 |
macrophage dendritic cell progenitor | 9.76e-16 | 61 |
vascular associated smooth muscle cell | 1.12e-15 | 32 |
monopoietic cell | 2.78e-14 | 59 |
monocyte | 2.78e-14 | 59 |
monoblast | 2.78e-14 | 59 |
promonocyte | 2.78e-14 | 59 |
granulocyte monocyte progenitor cell | 4.50e-13 | 67 |
classical monocyte | 3.26e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.26e-12 | 42 |
smooth muscle cell | 1.01e-11 | 43 |
smooth muscle myoblast | 1.01e-11 | 43 |
myeloid lineage restricted progenitor cell | 2.14e-11 | 66 |
mesenchymal cell | 2.15e-11 | 354 |
connective tissue cell | 1.73e-10 | 361 |
muscle precursor cell | 3.48e-10 | 58 |
myoblast | 3.48e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.48e-10 | 58 |
myeloid leukocyte | 1.97e-09 | 72 |
muscle cell | 1.22e-08 | 55 |
aortic smooth muscle cell | 1.74e-08 | 10 |
preadipocyte | 5.31e-08 | 12 |
fibroblast | 8.30e-08 | 76 |
motile cell | 1.82e-07 | 386 |
macrophage | 3.52e-07 | 6 |
electrically responsive cell | 7.07e-07 | 61 |
electrically active cell | 7.07e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.93e-09 | 14 |